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Integrative Orthology Viewer:
Cc01_g00150
(Coffea canephora)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Coffea canephora | Orthologous gene family | Cc01_g00150 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | Cc01_g00150 | 1 | ||
| Tree-based ortholog | Cc01_g00150 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Actinidia chinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Achn388271 | 1 | |
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL1G63490 AL3G25390 | 2 | |
| Anchor point | N/A | AL1G63490 AL3G25390 | 2 | ||
| Tree-based ortholog | 1-to-many | AL1G63490 AL3G25390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G25390 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT1G55475 AT3G13480 | 2 | |
| Anchor point | N/A | AT1G55475 AT3G13480 | 2 | ||
| Tree-based ortholog | 1-to-many | AT1G55475 AT3G13480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G13480 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | Bv4_070880_rshz | 1 | |
| Anchor point | N/A | Bv4_070880_rshz | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bv4_070880_rshz | 1 | ||
| Tree-based ortholog | 1-to-1 | Bv4_070880_rshz | 1 | ||
| Brassica oleracea | Orthologous gene family | 1-to-many | Bo1g138280 Bo3g065570 Bo3g185260 ... | 4 | |
| Tree-based ortholog | 1-to-many | Bo1g138280 Bo3g065570 Bo3g185260 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bo3g065570 | 1 | ||
| Anchor point | N/A | Bo3g185260 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | Brara.A03257 Brara.E02769 Brara.H00054 | 3 | |
| Tree-based ortholog | 1-to-many | Brara.A03257 Brara.E02769 Brara.H00054 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Brara.E02769 | 1 | ||
| Anchor point | N/A | Brara.H00054 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | Carubv10011122m.g Carubv10016399m.g | 2 | |
| Anchor point | N/A | Carubv10011122m.g | 1 | ||
| Tree-based ortholog | 1-to-many | Carubv10011122m.g Carubv10016399m.g | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Carubv10016399m.g | 1 | ||
| Capsicum annuum | Orthologous gene family | 1-to-1 | CAN.G1834.12 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CAN.G1834.12 | 1 | ||
| Tree-based ortholog | 1-to-1 | CAN.G1834.12 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | Cpa.g.sc119.37 | 1 | |
| Anchor point | N/A | Cpa.g.sc119.37 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cpa.g.sc119.37 | 1 | ||
| Tree-based ortholog | 1-to-1 | Cpa.g.sc119.37 | 1 | ||
| Citrus clementina | Orthologous gene family | 1-to-1 | Ciclev10017000m.g | 1 | |
| Anchor point | N/A | Ciclev10017000m.g | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Ciclev10017000m.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Ciclev10017000m.g | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | MELO3C015574 | 1 | |
| Anchor point | N/A | MELO3C015574 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MELO3C015574 | 1 | ||
| Tree-based ortholog | 1-to-1 | MELO3C015574 | 1 | ||
| Cucumis sativus L. | Orthologous gene family | 1-to-1 | Cucsa.142270 | 1 | |
| Anchor point | N/A | Cucsa.142270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cucsa.142270 | 1 | ||
| Tree-based ortholog | 1-to-1 | Cucsa.142270 | 1 | ||
| Daucus carota | Orthologous gene family | 1-to-1 | DCAR_032194 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | DCAR_032194 | 1 | ||
| Tree-based ortholog | 1-to-1 | DCAR_032194 | 1 | ||
| Erythranthe guttata | Orthologous gene family | 1-to-many | Migut.D02571 Migut.D02593 Migut.N00543 | 3 | |
| Anchor point | N/A | Migut.D02571 Migut.N00543 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Migut.D02571 Migut.D02593 | 2 | ||
| Tree-based ortholog | 1-to-1 | Migut.N00543 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | Eucgr.J01763 | 1 | |
| Anchor point | N/A | Eucgr.J01763 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Eucgr.J01763 | 1 | ||
| Tree-based ortholog | 1-to-1 | Eucgr.J01763 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FVE01599 | 1 | |
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Gorai.009G258400 | 1 | |
| Hevea brasiliensis | Orthologous gene family | 1-to-1 | HBR2759G037 | 1 | |
| Anchor point | N/A | HBR2759G037 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HBR2759G037 | 1 | ||
| Tree-based ortholog | 1-to-1 | HBR2759G037 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MDO.mRNA.g.872.27 | 1 | |
| Anchor point | N/A | MDO.mRNA.g.872.27 | 1 | ||
| Tree-based ortholog | 1-to-1 | MDO.mRNA.g.872.27 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | Manes.15G109800 | 1 | |
| Anchor point | N/A | Manes.15G109800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Manes.15G109800 | 1 | ||
| Tree-based ortholog | 1-to-1 | Manes.15G109800 | 1 | ||
| Nelumbo nucifera | Orthologous gene family | 1-to-many | NNU_03038 NNU_23613 | 2 | |
| Anchor point | N/A | NNU_03038 NNU_23613 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | NNU_03038 NNU_23613 | 2 | ||
| Tree-based ortholog | 1-to-many | NNU_03038 NNU_23613 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | LOC_Os03g58090 LOC_Os07g07646 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os03g58090 | 1 | ||
| Petunia axillaris | Orthologous gene family | 1-to-1 | Peaxi162Scf00705g00062 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Peaxi162Scf00705g00062 | 1 | ||
| Tree-based ortholog | 1-to-1 | Peaxi162Scf00705g00062 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | Potri.001G003300 Potri.003G221800 | 2 | |
| Anchor point | N/A | Potri.001G003300 Potri.003G221800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Potri.001G003300 Potri.003G221800 | 2 | ||
| Tree-based ortholog | 1-to-many | Potri.001G003300 Potri.003G221800 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | Prupe.6G002800 | 1 | |
| Anchor point | N/A | Prupe.6G002800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Prupe.6G002800 | 1 | ||
| Tree-based ortholog | 1-to-1 | Prupe.6G002800 | 1 | ||
| Pyrus bretschneideri | Orthologous gene family | 1-to-1 | Pbr000765.1.g | 1 | |
| Anchor point | N/A | Pbr000765.1.g | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Pbr000765.1.g | 1 | ||
| Tree-based ortholog | 1-to-1 | Pbr000765.1.g | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RCO.g.28842.000038 | 1 | |
| Anchor point | N/A | RCO.g.28842.000038 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RCO.g.28842.000038 | 1 | ||
| Tree-based ortholog | 1-to-1 | RCO.g.28842.000038 | 1 | ||
| Schrenkiella parvula | Orthologous gene family | 1-to-1 | Tp3g11690 | 1 | |
| Anchor point | N/A | Tp3g11690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Tp3g11690 | 1 | ||
| Tree-based ortholog | 1-to-1 | Tp3g11690 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | Solyc01g005530.2 | 1 | |
| Anchor point | N/A | Solyc01g005530.2 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Solyc01g005530.2 | 1 | ||
| Tree-based ortholog | 1-to-1 | Solyc01g005530.2 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | PGSC0003DMG402032165 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PGSC0003DMG402032165 | 1 | ||
| Tree-based ortholog | 1-to-1 | PGSC0003DMG402032165 | 1 | ||
| Tarenaya hassleriana | Orthologous gene family | 1-to-many | THA.LOC104810320 THA.LOC104815671 THA.LOC104822699 | 3 | |
| Anchor point | N/A | THA.LOC104810320 THA.LOC104822699 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | THA.LOC104810320 THA.LOC104815671 THA.LOC104822699 | 3 | ||
| Tree-based ortholog | 1-to-many | THA.LOC104810320 THA.LOC104815671 THA.LOC104822699 | 3 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | GSVIVG01025476001 | 1 | |
| Anchor point | N/A | GSVIVG01025476001 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01025476001 | 1 | ||
| Tree-based ortholog | 1-to-1 | GSVIVG01025476001 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | Zm00001d013082 Zm00001d018906 Zm00001d034425 | 3 | |
| Ziziphus jujuba | Orthologous gene family | 1-to-1 | ZJU.LOC107415059 | 1 | |
| Anchor point | N/A | ZJU.LOC107415059 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZJU.LOC107415059 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZJU.LOC107415059 | 1 |