Integrative Orthology Viewer: Cc01_g00080 (Coffea canephora) top


Inparalogs

Organism Source Genes #genes Details
Coffea canephoraOrthologous gene familyCc00_g01230 Cc00_g14210 Cc00_g22990 ...35
Best-Hits-and-Inparalogs(BHI)familyCc01_g00080 1

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn021301 Achn073791 Achn077081 ...14
Anchor pointN/AAchn148791 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Achn148791 1
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH002509 AH003314 AH004444 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1AH007638 1
Amborella trichopodaOrthologous gene familymany-to-manyATR0088G012 ATR0582G173 ATR0582G263 ...10
Anchor pointN/AATR0737G069 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0737G069 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G21680 AL1G37140 AL1G63410 ...28
Anchor pointN/AAL1G63410 AL3G25420 AL8G32290 3
Best-Hits-and-Inparalogs(BHI)family1-to-1AL8G32290 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G10750 AT1G23340 AT1G55360 ...27
Anchor pointN/AAT1G55360 AT3G13510 AT5G56530 3
Best-Hits-and-Inparalogs(BHI)family1-to-1AT5G56530 1
Arachis ipaensisOrthologous gene familymany-to-manyAraip.81MG0 Araip.BH0CH Araip.C8K92 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1Araip.81MG0 1
Beta vulgarisOrthologous gene familymany-to-manyBv2_033060_khcy Bv2_033070_srop Bv3_066140_coom ...8
Anchor pointN/ABv4_070910_qwod 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bv4_070910_qwod 1
Brassica oleraceaOrthologous gene familymany-to-manyBo00877s030 Bo00934s030 Bo07517s010 ...62
Anchor pointN/ABo3g185130 Bo9g126080 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Bo9g126080 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A01339 Brara.A01340 Brara.A01904 ...43
Anchor pointN/ABrara.H00060 Brara.J01082 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Brara.J01082 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_00092.g C.cajan_05496.g C.cajan_05497.g ...20
Best-Hits-and-Inparalogs(BHI)family1-to-1C.cajan_20480.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10000988m.g Carubv10002716m.g Carubv10002993m.g ...39
Anchor pointN/ACarubv10009242m.g Carubv10026476m.g 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Carubv10026476m.g 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.sc131.15 Cpa.g.sc1498.1 Cpa.g.sc153.10 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1Cpa.g.sc228.24 1
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62000637 AUR62005433 AUR62006992 ...16
Best-Hits-and-Inparalogs(BHI)family1-to-manyAUR62019162 AUR62040901 AUR62042627 3
Anchor pointN/AAUR62040901 1
Cicer arietinumOrthologous gene familymany-to-manyCa_01273.g Ca_01621.g Ca_01622.g ...25
Anchor pointN/ACa_08675.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Ca_08675.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla000818.g Cla002191.g Cla003127.g ...14
Anchor pointN/ACla003127.g Cla011110.g 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cla003127.g 1
Citrus clementinaOrthologous gene familymany-to-manyCiclev10008443m.g Ciclev10010192m.g Ciclev10010211m.g ...13
Anchor pointN/ACiclev10015338m.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Ciclev10015338m.g 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_03707 COL.COLO4_05798 COL.COLO4_10040 ...21
Best-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_05798 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C002285 MELO3C010125 MELO3C010683 ...10
Anchor pointN/AMELO3C014725 MELO3C015575 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MELO3C014725 1
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.027600 Cucsa.049850 Cucsa.098630 ...11
Anchor pointN/ACucsa.142280 Cucsa.152730 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.152730 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_001978 DCAR_003053 DCAR_005522 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-manyDCAR_015726 DCAR_024997 2
Erythranthe guttataOrthologous gene familymany-to-manyMigut.B01414 Migut.D02568 Migut.D02590 ...11
Anchor pointN/AMigut.D02568 Migut.N00554 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Migut.N00554 1
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.B00244 Eucgr.B03303 Eucgr.B03602 ...25
Anchor pointN/AEucgr.J01765 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.J01765 1
Fragaria vescaOrthologous gene familymany-to-manyFVE01601 FVE02657 FVE02658 ...8
Anchor pointN/AFVE01601 1
Best-Hits-and-Inparalogs(BHI)family1-to-1FVE01601 1
Glycine maxOrthologous gene familymany-to-manyGlyma.01G027800 Glyma.02G037400 Glyma.03G252200 ...26
Anchor pointN/AGlyma.05G167100 Glyma.08G125400 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Glyma.08G125400 1
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.001G241400 Gorai.002G186400 Gorai.004G212400 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-1Gorai.009G000100 1
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0714G023 HBR0807G023 HBR0891G026 ...8
Anchor pointN/AHBR2759G014 1
Best-Hits-and-Inparalogs(BHI)family1-to-1HBR2759G014 1
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1007.20 MDO.mRNA.g.104.59 MDO.mRNA.g.104.60 ...15
Anchor pointN/AMDO.mRNA.g.1539.6 MDO.mRNA.g.872.31 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.3510.26 1
Manihot esculentaOrthologous gene familymany-to-manyManes.03G087500 Manes.06G107700 Manes.08G142300 ...13
Anchor pointN/AManes.15G109300 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Manes.15G109300 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0001s0368 Mapoly0056s0128 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0001s0368 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr0009s0020 Medtr1g016910 Medtr1g079730 ...37
Best-Hits-and-Inparalogs(BHI)family1-to-1Medtr8g088510 1
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_02304 NNU_03036 NNU_04196 ...8
Anchor pointN/ANNU_03036 NNU_23609 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyNNU_03036 NNU_23609 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g07570 LOC_Os01g36660 LOC_Os01g37000 ...13
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os07g38590 1
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00077g01710 Peaxi162Scf00089g01636 Peaxi162Scf00247g00617 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf00705g00046 1
Physcomitrium patensOrthologous gene familymany-to-manyPp3c10_6890 Pp3c16_8870 Pp3c5_15690 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c10_6890 Pp3c6_29500 2
Picea abiesOrthologous gene familymany-to-manyPAB00004625 PAB00018280 PAB00019018 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00055505 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G003800 Potri.001G233000 Potri.003G221200 ...12
Anchor pointN/APotri.001G003800 Potri.003G221200 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.001G003800 Potri.003G221200 2
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G248600 Prupe.1G415600 Prupe.1G415700 ...10
Anchor pointN/APrupe.6G003200 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Prupe.6G003200 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr000762.1.g Pbr001912.1.g Pbr003041.1.g ...15
Anchor pointN/APbr000762.1.g Pbr030170.1.g 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPbr000762.1.g Pbr030170.1.g 2
Ricinus communisOrthologous gene familymany-to-manyRCO.g.27504.000011 RCO.g.28842.000045 RCO.g.29616.000001 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.28842.000045 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g09590 Tp1g20790 Tp1g34220 ...25
Anchor pointN/ATp1g41040 Tp3g11720 Tp6g18320 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Tp6g18320 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO116G0223 SMO116G0392 SMO118G0006 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-manySMO118G0006 SMO358G0488 2
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g005550.2 Solyc01g081570.2 Solyc03g112620.2 ...8
Anchor pointN/ASolyc01g005550.2 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc01g005550.2 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400001139 PGSC0003DMG400007678 PGSC0003DMG400018103 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1PGSC0003DMG400032123 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104800028 THA.LOC104801734 THA.LOC104801736 ...55
Anchor pointN/ATHA.LOC104810323 1
Best-Hits-and-Inparalogs(BHI)family1-to-1THA.LOC104811722 1
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_001624 TCA.TCM_010459 TCA.TCM_012159 ...9
Anchor pointN/ATCA.TCM_038694 1
Best-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_038694 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G10261 TPR.G10282 TPR.G11660 ...52
Best-Hits-and-Inparalogs(BHI)family1-to-1TPR.G6722 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00010.1571 UGI.Scf00015.2055 UGI.Scf00015.2057 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-manyUGI.Scf00010.1571 UGI.Scf01044.22707 2
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi0070s00420 Vradi0083s00190 Vradi01g11290 ...16
Best-Hits-and-Inparalogs(BHI)family1-to-1Vradi05g18550 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01003358001 GSVIVG01006002001 GSVIVG01006653001 ...17
Anchor pointN/AGSVIVG01025471001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01025471001 1
Zea maysOrthologous gene familymany-to-manyZm00001d008716 Zm00001d019125 Zm00001d021879 ...13
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d021879 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107406264 ZJU.LOC107412313 ZJU.LOC107415018 ...9
Anchor pointN/AZJU.LOC107415018 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ZJU.LOC107415018 1
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