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Integrative Orthology Viewer:
Cc01_g00020
(Coffea canephora)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Coffea canephora | Orthologous gene family | Cc01_g00020 Cc01_g03260 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | Cc01_g00020 Cc01_g03260 | 2 | ||
| Tree-based ortholog | Cc01_g00020 Cc01_g03260 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amaranthus hypochondriacus | Orthologous gene family | many-to-1 | AH007641 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AH007641 | 1 | ||
| Tree-based ortholog | many-to-1 | AH007641 | 1 | ||
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR0737G157 | 1 | |
| Anchor point | N/A | ATR0737G157 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR0737G157 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR0737G157 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL7G26640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G26640 | 1 | ||
| Tree-based ortholog | many-to-1 | AL7G26640 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G26310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G26310 | 1 | ||
| Tree-based ortholog | many-to-1 | AT4G26310 | 1 | ||
| Arachis ipaensis | Orthologous gene family | many-to-1 | Araip.R63PG | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Araip.R63PG | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | Bv4_070950_jkpx | 1 | |
| Anchor point | N/A | Bv4_070950_jkpx | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Bv4_070950_jkpx | 1 | ||
| Tree-based ortholog | many-to-1 | Bv4_070950_jkpx | 1 | ||
| Brassica oleracea | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Bo5g126750 | 1 | |
| Tree-based ortholog | many-to-1 | Bo5g126750 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | Brara.E02571 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Brara.E02571 | 1 | ||
| Tree-based ortholog | many-to-1 | Brara.E02571 | 1 | ||
| Cajanus cajan | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | C.cajan_32602.g | 1 | |
| Capsella rubella | Orthologous gene family | many-to-1 | Carubv10006870m.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Carubv10006870m.g | 1 | ||
| Tree-based ortholog | many-to-1 | Carubv10006870m.g | 1 | ||
| Capsicum annuum | Orthologous gene family | many-to-many | CAN.G132.16 CAN.G752.2 CAN.G782.23 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | CAN.G132.16 CAN.G752.2 CAN.G782.23 | 3 | ||
| Tree-based ortholog | many-to-many | CAN.G132.16 CAN.G752.2 CAN.G782.23 | 3 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Cpa.g.sc86.59 | 1 | |
| Chenopodium quinoa | Orthologous gene family | many-to-many | AUR62019167 AUR62040906 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AUR62019167 | 1 | ||
| Tree-based ortholog | many-to-many | AUR62019167 AUR62040906 | 2 | ||
| Anchor point | N/A | AUR62040906 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | Cre06.g263050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Cre06.g263050 | 1 | ||
| Tree-based ortholog | many-to-1 | Cre06.g263050 | 1 | ||
| Cicer arietinum | Orthologous gene family | many-to-1 | Ca_11428.g | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Ca_11428.g | 1 | ||
| Tree-based ortholog | many-to-1 | Ca_11428.g | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | Cla011103.g | 1 | |
| Citrus clementina | Orthologous gene family | many-to-1 | Ciclev10016443m.g | 1 | |
| Anchor point | N/A | Ciclev10016443m.g | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Ciclev10016443m.g | 1 | ||
| Tree-based ortholog | many-to-1 | Ciclev10016443m.g | 1 | ||
| Corchorus olitorius | Orthologous gene family | many-to-1 | COL.COLO4_22858 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | COL.COLO4_22858 | 1 | ||
| Tree-based ortholog | many-to-1 | COL.COLO4_22858 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MELO3C009104 | 1 | |
| Cucumis sativus L. | Orthologous gene family | many-to-1 | Cucsa.142330 | 1 | |
| Anchor point | N/A | Cucsa.142330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Cucsa.142330 | 1 | ||
| Tree-based ortholog | many-to-1 | Cucsa.142330 | 1 | ||
| Daucus carota | Orthologous gene family | many-to-1 | DCAR_025361 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | DCAR_025361 | 1 | ||
| Tree-based ortholog | many-to-1 | DCAR_025361 | 1 | ||
| Erythranthe guttata | Orthologous gene family | many-to-1 | Migut.D02561 | 1 | |
| Anchor point | N/A | Migut.D02561 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Migut.D02561 | 1 | ||
| Tree-based ortholog | many-to-1 | Migut.D02561 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | Eucgr.J01769 | 1 | |
| Anchor point | N/A | Eucgr.J01769 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Eucgr.J01769 | 1 | ||
| Tree-based ortholog | many-to-1 | Eucgr.J01769 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FVE24833 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FVE24833 | 1 | ||
| Tree-based ortholog | many-to-1 | FVE24833 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | Glyma.04G122600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Glyma.04G122600 | 1 | ||
| Tree-based ortholog | many-to-1 | Glyma.04G122600 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | Gorai.009G114600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Gorai.009G114600 | 1 | ||
| Tree-based ortholog | many-to-1 | Gorai.009G114600 | 1 | ||
| Hevea brasiliensis | Orthologous gene family | many-to-1 | HBR1241G001 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HBR1241G001 | 1 | ||
| Tree-based ortholog | many-to-1 | HBR1241G001 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MDO.mRNA.g.1408.1 MDO.mRNA.g.6809.2 MDO.mRNA.g.872.40 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MDO.mRNA.g.1408.1 | 1 | ||
| Tree-based ortholog | many-to-many | MDO.mRNA.g.1408.1 MDO.mRNA.g.872.40 | 2 | ||
| Anchor point | N/A | MDO.mRNA.g.872.40 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | Manes.05G202800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Manes.05G202800 | 1 | ||
| Tree-based ortholog | many-to-1 | Manes.05G202800 | 1 | ||
| Marchantia polymorpha | Orthologous gene family | many-to-1 | Mapoly0009s0101 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Mapoly0009s0101 | 1 | ||
| Tree-based ortholog | many-to-1 | Mapoly0009s0101 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | Medtr3g083530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Medtr3g083530 | 1 | ||
| Tree-based ortholog | many-to-1 | Medtr3g083530 | 1 | ||
| Micromonas commoda | Orthologous gene family | many-to-1 | MCO01G577 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MCO01G577 | 1 | ||
| Nelumbo nucifera | Orthologous gene family | many-to-1 | NNU_03027 | 1 | |
| Anchor point | N/A | NNU_03027 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | NNU_03027 | 1 | ||
| Tree-based ortholog | many-to-1 | NNU_03027 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | LOC_Os03g59160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LOC_Os03g59160 | 1 | ||
| Tree-based ortholog | many-to-1 | LOC_Os03g59160 | 1 | ||
| Petunia axillaris | Orthologous gene family | many-to-1 | Peaxi162Scf00005g00613 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Peaxi162Scf00005g00613 | 1 | ||
| Tree-based ortholog | many-to-1 | Peaxi162Scf00005g00613 | 1 | ||
| Physcomitrium patens | Orthologous gene family | many-to-1 | Pp3c1_29390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Pp3c1_29390 | 1 | ||
| Tree-based ortholog | many-to-1 | Pp3c1_29390 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | Potri.001G004300 | 1 | |
| Anchor point | N/A | Potri.001G004300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Potri.001G004300 | 1 | ||
| Tree-based ortholog | many-to-1 | Potri.001G004300 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | Prupe.6G003800 | 1 | |
| Anchor point | N/A | Prupe.6G003800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Prupe.6G003800 | 1 | ||
| Tree-based ortholog | many-to-1 | Prupe.6G003800 | 1 | ||
| Pyrus bretschneideri | Orthologous gene family | many-to-many | Pbr000756.1.g Pbr030164.2.g | 2 | |
| Anchor point | N/A | Pbr000756.1.g Pbr030164.2.g | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | Pbr000756.1.g Pbr030164.2.g | 2 | ||
| Tree-based ortholog | many-to-many | Pbr000756.1.g Pbr030164.2.g | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RCO.g.58870.000001 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RCO.g.58870.000001 | 1 | ||
| Tree-based ortholog | many-to-1 | RCO.g.58870.000001 | 1 | ||
| Schrenkiella parvula | Orthologous gene family | many-to-1 | Tp3g14020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Tp3g14020 | 1 | ||
| Tree-based ortholog | many-to-1 | Tp3g14020 | 1 | ||
| Selaginella moellendorffii | Orthologous gene family | many-to-1 | SMO172G0180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SMO172G0180 | 1 | ||
| Tree-based ortholog | many-to-1 | SMO172G0180 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | Solyc01g044480.2 Solyc01g044490.2 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Solyc01g044480.2 | 1 | ||
| Tree-based ortholog | many-to-1 | Solyc01g044480.2 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PGSC0003DMG400031234 | 1 | |
| Tarenaya hassleriana | Orthologous gene family | many-to-1 | THA.LOC104817736 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | THA.LOC104817736 | 1 | ||
| Tree-based ortholog | many-to-1 | THA.LOC104817736 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TCA.TCM_027103 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TCA.TCM_027103 | 1 | ||
| Tree-based ortholog | many-to-1 | TCA.TCM_027103 | 1 | ||
| Trifolium pratense | Orthologous gene family | many-to-1 | TPR.G19319 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TPR.G19319 | 1 | ||
| Tree-based ortholog | many-to-1 | TPR.G19319 | 1 | ||
| Utricularia gibba | Orthologous gene family | many-to-1 | UGI.Scf00006.1018 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | UGI.Scf00006.1018 | 1 | ||
| Tree-based ortholog | many-to-1 | UGI.Scf00006.1018 | 1 | ||
| Vigna radiata var. radiata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Vradi04g05540 | 1 | |
| Vitis vinifera | Orthologous gene family | many-to-1 | GSVIVG01025464001 | 1 | |
| Anchor point | N/A | GSVIVG01025464001 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GSVIVG01025464001 | 1 | ||
| Tree-based ortholog | many-to-1 | GSVIVG01025464001 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | Zm00001d034524 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Zm00001d034524 | 1 | ||
| Ziziphus jujuba | Orthologous gene family | many-to-1 | ZJU.LOC107415035 | 1 | |
| Anchor point | N/A | ZJU.LOC107415035 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZJU.LOC107415035 | 1 | ||
| Tree-based ortholog | many-to-1 | ZJU.LOC107415035 | 1 |