Integrative Orthology Viewer: Brara.C04298 (Brassica rapa) top


Inparalogs

Organism Source Genes #genes Details
Brassica rapaBest-Hits-and-Inparalogs(BHI)familyBrara.C04298 1
Tree-based orthologBrara.C04298 1
Orthologous gene familyBrara.C04298 Brara.A03926 Brara.B00586 ...10
Anchor pointBrara.F02474 Brara.I00844 2

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisBest-Hits-and-Inparalogs(BHI)family1-to-1Achn373181 1
Tree-based ortholog1-to-manyAchn373181 Achn364131 Achn012811 3
Orthologous gene familymany-to-manyAchn373181 Achn364131 Achn012811 ...11
Amaranthus hypochondriacusBest-Hits-and-Inparalogs(BHI)family1-to-manyAH005704 AH003870 2
Tree-based ortholog1-to-manyAH005704 AH003870 2
Orthologous gene familymany-to-manyAH005704 AH003870 AH000660 ...7
Anchor pointmany-to-1AH003870 1
Amborella trichopodaBest-Hits-and-Inparalogs(BHI)family1-to-1ATR1153G051 1
Tree-based ortholog1-to-1ATR1153G051 1
Orthologous gene familymany-to-manyATR1153G051 ATR0580G110 ATR0697G113 ...5
Arabidopsis lyrataBest-Hits-and-Inparalogs(BHI)family1-to-1AL5G29930 1
Tree-based ortholog1-to-1AL5G29930 1
Orthologous gene familymany-to-manyAL5G29930 AL3G10960 AL6G25910 ...5
Anchor pointmany-to-manyAL5G29930 AL8G43800 2
Arabidopsis thalianaBest-Hits-and-Inparalogs(BHI)family1-to-1AT5G67500 1
Tree-based ortholog1-to-1AT5G67500 1
Orthologous gene familymany-to-manyAT5G67500 AT3G01280 AT3G49920 ...6
Anchor pointmany-to-manyAT5G67500 AT3G49920 2
Arachis ipaensisBest-Hits-and-Inparalogs(BHI)family1-to-1Araip.V2UYE 1
Tree-based ortholog1-to-1Araip.V2UYE 1
Orthologous gene familymany-to-manyAraip.V2UYE Araip.1YR52 Araip.37K80 ...8
Beta vulgarisBest-Hits-and-Inparalogs(BHI)family1-to-1Bv6_128150_iand 1
Tree-based ortholog1-to-1Bv6_128150_iand 1
Orthologous gene familymany-to-manyBv6_128150_iand Bv2_040400_wwnp Bv6_154570_sjpf ...5
Brassica oleraceaBest-Hits-and-Inparalogs(BHI)family1-to-1Bo7g099130 1
Tree-based ortholog1-to-1Bo7g099130 1
Orthologous gene familymany-to-manyBo7g099130 Bo01417s020 Bo1g158790 ...16
Anchor pointmany-to-manyBo7g099130 Bo9g019110 2
Cajanus cajanBest-Hits-and-Inparalogs(BHI)family1-to-1C.cajan_24476.g 1
Tree-based ortholog1-to-1C.cajan_24476.g 1
Orthologous gene familymany-to-manyC.cajan_24476.g C.cajan_03638.g C.cajan_08221.g ...6
Anchor pointmany-to-1C.cajan_01675.g 1
Capsella rubellaBest-Hits-and-Inparalogs(BHI)family1-to-1Carubv10026938m.g 1
Orthologous gene familymany-to-manyCarubv10026938m.g Carubv10017863m.g Carubv10001678m.g ...5
Anchor pointmany-to-manyCarubv10026938m.g Carubv10017863m.g 2
Tree-based ortholog1-to-1Carubv10017863m.g 1
Capsicum annuumBest-Hits-and-Inparalogs(BHI)family1-to-1CAN.G1075.30 1
Tree-based ortholog1-to-manyCAN.G1075.30 CAN.G278.13 2
Orthologous gene familymany-to-manyCAN.G1075.30 CAN.G278.13 CAN.G1128.3 ...12
Anchor pointmany-to-1CAN.G1075.30 1
Carica papayaBest-Hits-and-Inparalogs(BHI)family1-to-1Cpa.g.sc5.272 1
Orthologous gene familymany-to-manyCpa.g.sc5.272 Cpa.g.sc6.23 Cpa.g.c32999 ...4
Tree-based ortholog1-to-1Cpa.g.sc6.23 1
Anchor pointmany-to-1Cpa.g.sc6.23 1
Chenopodium quinoaBest-Hits-and-Inparalogs(BHI)family1-to-manyAUR62040245 AUR62004001 2
Tree-based ortholog1-to-manyAUR62040245 AUR62004001 2
Orthologous gene familymany-to-manyAUR62040245 AUR62004001 AUR62005728 ...10
Anchor pointmany-to-manyAUR62040245 AUR62004001 2
Chlamydomonas reinhardtiiTree-based ortholog1-to-manyCre01.g013700 Cre05.g241950 2
Orthologous gene familymany-to-manyCre01.g013700 Cre05.g241950 2
Cicer arietinumBest-Hits-and-Inparalogs(BHI)family1-to-1Ca_02221.g 1
Tree-based ortholog1-to-1Ca_02221.g 1
Orthologous gene familymany-to-manyCa_02221.g Ca_03253.g Ca_10539.g ...5
Citrullus lanatusBest-Hits-and-Inparalogs(BHI)family1-to-1Cla020200.g 1
Tree-based ortholog1-to-1Cla020200.g 1
Orthologous gene familymany-to-manyCla020200.g Cla017029.g Cla018824.g ...4
Citrus clementinaBest-Hits-and-Inparalogs(BHI)family1-to-1Ciclev10026251m.g 1
Tree-based ortholog1-to-1Ciclev10026251m.g 1
Orthologous gene familymany-to-manyCiclev10026251m.g Ciclev10009163m.g Ciclev10012445m.g ...4
Coffea canephoraBest-Hits-and-Inparalogs(BHI)family1-to-1Cc07_g07040 1
Tree-based ortholog1-to-1Cc07_g07040 1
Orthologous gene familymany-to-manyCc07_g07040 Cc06_g13320 Cc07_g03010 ...6
Corchorus olitoriusBest-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_11568 1
Tree-based ortholog1-to-1COL.COLO4_11568 1
Orthologous gene familymany-to-manyCOL.COLO4_11568 COL.COLO4_07927 COL.COLO4_25174 ...5
Cucumis meloBest-Hits-and-Inparalogs(BHI)family1-to-1MELO3C020905 1
Tree-based ortholog1-to-1MELO3C020905 1
Orthologous gene familymany-to-manyMELO3C020905 MELO3C000215 MELO3C009893 ...6
Anchor pointmany-to-1MELO3C016818 1
Cucumis sativus L.Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.366930 1
Tree-based ortholog1-to-1Cucsa.366930 1
Orthologous gene familymany-to-manyCucsa.366930 Cucsa.005450 Cucsa.092460 ...5
Anchor pointmany-to-1Cucsa.352820 1
Daucus carotaBest-Hits-and-Inparalogs(BHI)family1-to-1DCAR_000295 1
Tree-based ortholog1-to-manyDCAR_000295 DCAR_025797 2
Orthologous gene familymany-to-manyDCAR_000295 DCAR_025797 DCAR_007133 ...11
Erythranthe guttataBest-Hits-and-Inparalogs(BHI)family1-to-1Migut.L00213 1
Tree-based ortholog1-to-manyMigut.L00213 Migut.H00352 2
Orthologous gene familymany-to-manyMigut.L00213 Migut.H00352 Migut.E00113 ...8
Eucalyptus grandisBest-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.I00711 1
Tree-based ortholog1-to-1Eucgr.I00711 1
Orthologous gene familymany-to-manyEucgr.I00711 Eucgr.C00165 Eucgr.F02253 ...6
Fragaria vescaBest-Hits-and-Inparalogs(BHI)family1-to-1FVE05750 1
Tree-based ortholog1-to-1FVE05750 1
Orthologous gene familymany-to-manyFVE05750 FVE01268 FVE02569 ...7
Anchor pointmany-to-1FVE05750 1
Glycine maxBest-Hits-and-Inparalogs(BHI)family1-to-manyGlyma.11G048200 Glyma.01G193700 2
Tree-based ortholog1-to-manyGlyma.11G048200 Glyma.01G193700 2
Orthologous gene familymany-to-manyGlyma.11G048200 Glyma.01G193700 Glyma.08G296700 ...12
Anchor pointmany-to-manyGlyma.11G048200 Glyma.01G193700 Glyma.17G235700 ...4
Gossypium raimondiiBest-Hits-and-Inparalogs(BHI)family1-to-1Gorai.008G082900 1
Tree-based ortholog1-to-manyGorai.008G082900 Gorai.007G223000 2
Orthologous gene familymany-to-manyGorai.008G082900 Gorai.007G223000 Gorai.001G256800 ...15
Anchor pointmany-to-manyGorai.007G223000 Gorai.008G190600 2
Hevea brasiliensisBest-Hits-and-Inparalogs(BHI)family1-to-1HBR3312G032 1
Tree-based ortholog1-to-1HBR3312G032 1
Orthologous gene familymany-to-manyHBR3312G032 HBR0436G011 HBR0436G025 ...8
Malus domesticaBest-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.2330.15 1
Orthologous gene familymany-to-manyMDO.mRNA.g.2330.15 MDO.mRNA.g.9208.1 MDO.mRNA.g.1221.43 ...9
Tree-based ortholog1-to-1MDO.mRNA.g.9208.1 1
Manihot esculentaBest-Hits-and-Inparalogs(BHI)family1-to-1Manes.05G181800 1
Tree-based ortholog1-to-manyManes.05G181800 Manes.18G046300 2
Orthologous gene familymany-to-manyManes.05G181800 Manes.18G046300 Manes.01G189900 ...6
Marchantia polymorphaBest-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0001s0240 1
Tree-based ortholog1-to-manyMapoly0001s0240 Mapoly0045s0018 2
Orthologous gene familymany-to-manyMapoly0001s0240 Mapoly0045s0018 2
Medicago truncatulaBest-Hits-and-Inparalogs(BHI)family1-to-1Medtr5g015580 1
Tree-based ortholog1-to-1Medtr5g015580 1
Orthologous gene familymany-to-manyMedtr5g015580 Medtr1g018205 Medtr4g128300 ...6
Micromonas commodaOrthologous gene familymany-to-manyMCO01G034 MCO02G071 2
Nelumbo nuciferaBest-Hits-and-Inparalogs(BHI)family1-to-manyNNU_22555 NNU_13747 2
Tree-based ortholog1-to-manyNNU_22555 NNU_13747 2
Orthologous gene familymany-to-manyNNU_22555 NNU_13747 NNU_07203 ...4
Oryza sativa ssp. japonicaBest-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os03g10510 1
Tree-based ortholog1-to-1LOC_Os03g10510 1
Orthologous gene familymany-to-manyLOC_Os03g10510 LOC_Os01g40570 LOC_Os01g51770 ...5
Petunia axillarisBest-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf00118g01923 1
Tree-based ortholog1-to-manyPeaxi162Scf00118g01923 Peaxi162Scf00548g00650 2
Orthologous gene familymany-to-manyPeaxi162Scf00118g01923 Peaxi162Scf00548g00650 Peaxi162Scf00009g00319 ...11
Physcomitrium patensBest-Hits-and-Inparalogs(BHI)family1-to-manyPp3c15_9100 Pp3c9_21110 2
Tree-based ortholog1-to-manyPp3c15_9100 Pp3c9_21110 Pp3c10_18660 3
Orthologous gene familymany-to-manyPp3c15_9100 Pp3c9_21110 Pp3c10_18660 3
Picea abiesBest-Hits-and-Inparalogs(BHI)family1-to-1PAB00035709 1
Tree-based ortholog1-to-1PAB00035709 1
Orthologous gene familymany-to-manyPAB00035709 PAB00000160 PAB00007516 ...12
Populus trichocarpaBest-Hits-and-Inparalogs(BHI)family1-to-manyPotri.007G055800 Potri.005G146800 Potri.007G055600 3
Tree-based ortholog1-to-manyPotri.007G055800 Potri.005G146800 Potri.007G055600 3
Orthologous gene familymany-to-manyPotri.007G055800 Potri.005G146800 Potri.007G055600 ...14
Prunus persicaBest-Hits-and-Inparalogs(BHI)family1-to-1Prupe.6G221700 1
Tree-based ortholog1-to-1Prupe.6G221700 1
Orthologous gene familymany-to-manyPrupe.6G221700 Prupe.1G086700 Prupe.1G268200 ...6
Anchor pointmany-to-1Prupe.6G221700 1
Pyrus bretschneideriBest-Hits-and-Inparalogs(BHI)family1-to-manyPbr001039.1.g Pbr023541.1.g Pbr024314.1.g 3
Tree-based ortholog1-to-manyPbr001039.1.g Pbr023541.1.g Pbr024314.1.g 3
Orthologous gene familymany-to-manyPbr001039.1.g Pbr023541.1.g Pbr024314.1.g ...7
Ricinus communisBest-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.29661.000019 1
Tree-based ortholog1-to-1RCO.g.29661.000019 1
Orthologous gene familymany-to-manyRCO.g.29661.000019 RCO.g.29736.000030 RCO.g.29822.000148 ...4
Schrenkiella parvulaBest-Hits-and-Inparalogs(BHI)family1-to-1Tp5g12190 1
Tree-based ortholog1-to-1Tp5g12190 1
Orthologous gene familymany-to-manyTp5g12190 Tp2g29150 Tp3g00820 ...5
Anchor pointmany-to-manyTp5g12190 Tp2g29150 2
Selaginella moellendorffiiBest-Hits-and-Inparalogs(BHI)family1-to-1SMO146G0170 1
Tree-based ortholog1-to-manySMO146G0170 SMO353G0066 SMO271G0145 ...4
Orthologous gene familymany-to-manySMO146G0170 SMO353G0066 SMO271G0145 ...4
Solanum lycopersicumBest-Hits-and-Inparalogs(BHI)family1-to-1Solyc02g092440.2 1
Tree-based ortholog1-to-manySolyc02g092440.2 Solyc03g044010.2 2
Orthologous gene familymany-to-manySolyc02g092440.2 Solyc03g044010.2 Solyc01g010760.2 ...6
Anchor pointmany-to-1Solyc02g092440.2 1
Solanum tuberosumBest-Hits-and-Inparalogs(BHI)family1-to-1PGSC0003DMG400021448 1
Tree-based ortholog1-to-manyPGSC0003DMG400021448 PGSC0003DMG400009093 2
Orthologous gene familymany-to-manyPGSC0003DMG400021448 PGSC0003DMG400009093 PGSC0003DMG400000864 ...5
Anchor pointmany-to-1PGSC0003DMG400021448 1
Tarenaya hasslerianaBest-Hits-and-Inparalogs(BHI)family1-to-manyTHA.LOC104819265 THA.LOC104821222 2
Tree-based ortholog1-to-manyTHA.LOC104819265 THA.LOC104821222 THA.LOC104821548 ...4
Orthologous gene familymany-to-manyTHA.LOC104819265 THA.LOC104821222 THA.LOC104821548 ...10
Anchor pointmany-to-1THA.LOC104819265 1
Theobroma cacaoBest-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_000790 1
Tree-based ortholog1-to-1TCA.TCM_000790 1
Orthologous gene familymany-to-manyTCA.TCM_000790 TCA.TCM_007229 TCA.TCM_011800 ...6
Anchor pointmany-to-manyTCA.TCM_000790 TCA.TCM_007229 2
Trifolium pratenseBest-Hits-and-Inparalogs(BHI)family1-to-1TPR.G34848 1
Tree-based ortholog1-to-1TPR.G34848 1
Orthologous gene familymany-to-manyTPR.G34848 TPR.G16086 TPR.G33253 ...7
Utricularia gibbaBest-Hits-and-Inparalogs(BHI)family1-to-1UGI.Scf00125.8987 1
Tree-based ortholog1-to-1UGI.Scf00125.8987 1
Orthologous gene familymany-to-manyUGI.Scf00125.8987 UGI.Scf00005.876 UGI.Scf00084.7138 ...5
Vigna radiata var. radiataBest-Hits-and-Inparalogs(BHI)family1-to-1Vradi11g04110 1
Tree-based ortholog1-to-1Vradi11g04110 1
Orthologous gene familymany-to-manyVradi11g04110 Vradi04g08510 Vradi06g14680 ...5
Anchor pointmany-to-1Vradi11g04110 1
Vitis viniferaBest-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01000122001 1
Tree-based ortholog1-to-manyGSVIVG01000122001 GSVIVG01000115001 2
Orthologous gene familymany-to-manyGSVIVG01000122001 GSVIVG01000115001 GSVIVG01009346001 ...6
Zea maysBest-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d048149 1
Tree-based ortholog1-to-manyZm00001d048149 Zm00001d028102 2
Orthologous gene familymany-to-manyZm00001d048149 Zm00001d028102 Zm00001d005649 ...13
Ziziphus jujubaBest-Hits-and-Inparalogs(BHI)family1-to-1ZJU.LOC107424967 1
Tree-based ortholog1-to-1ZJU.LOC107424967 1
Orthologous gene familymany-to-manyZJU.LOC107424967 ZJU.LOC107410370 ZJU.LOC107415614 3
Anchor pointmany-to-1ZJU.LOC107424967 1
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