Integrative Orthology Viewer: Bo3g047220 (Brassica oleracea) top


Inparalogs

Organism Source Genes #genes Details
Brassica oleraceaOrthologous gene familyBo01562s020 Bo1g085960 Bo1g105000 ...16
Best-Hits-and-Inparalogs(BHI)familyBo3g047220 1
Tree-based orthologBo3g047220 Bo4g120190 2
Anchor pointBo9g083170 1

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn035551 Achn118961 Achn130071 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1Achn267101 1
Tree-based orthologmany-to-manyAchn267101 Achn279871 2
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH002537 AH011857 AH013886 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyAH014639 AH021175 2
Tree-based orthologmany-to-manyAH014639 AH021175 2
Amborella trichopodaOrthologous gene familymany-to-manyATR0068G075 ATR0564G030 ATR0665G662 3
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0564G030 1
Tree-based orthologmany-to-1ATR0564G030 1
Arabidopsis lyrataOrthologous gene familymany-to-manyAL1G12570 AL1G50850 AL1G67220 ...13
Anchor point1-to-1AL6G42440 1
Best-Hits-and-Inparalogs(BHI)family1-to-1AL6G42440 1
Tree-based orthologmany-to-1AL6G42440 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G03103 AT1G36150 AT2G13820 ...13
Anchor point1-to-1AT4G08670 1
Best-Hits-and-Inparalogs(BHI)family1-to-1AT4G08670 1
Tree-based orthologmany-to-1AT4G08670 1
Arachis ipaensisOrthologous gene familymany-to-manyAraip.0K8ZX Araip.JP66B Araip.KTA7Q ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Araip.0K8ZX 1
Tree-based orthologmany-to-manyAraip.0K8ZX Araip.MX9CS Araip.Q3H1S 3
Beta vulgarisOrthologous gene familymany-to-manyBv5_119490_sxrk Bv5_119500_cuwt Bv5_119510_geht ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Bv8_190310_kiig 1
Tree-based orthologmany-to-1Bv8_190310_kiig 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A02034 Brara.A02242 Brara.A02714 ...19
Tree-based orthologmany-to-1Brara.B02897 1
Anchor point1-to-1Brara.C02572 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Brara.C02572 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_06613.g C.cajan_06615.g C.cajan_06617.g ...12
Tree-based orthologmany-to-manyC.cajan_22295.g C.cajan_22883.g 2
Best-Hits-and-Inparalogs(BHI)family1-to-1C.cajan_22883.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10002098m.g Carubv10002962m.g Carubv10007074m.g ...13
Best-Hits-and-Inparalogs(BHI)family1-to-1Carubv10002962m.g 1
Tree-based orthologmany-to-1Carubv10002962m.g 1
Capsicum annuumOrthologous gene familymany-to-manyCAN.G1094.20 CAN.G1094.21 CAN.G11.37 ...14
Tree-based orthologmany-to-manyCAN.G11.37 CAN.G523.89 2
Best-Hits-and-Inparalogs(BHI)family1-to-1CAN.G523.89 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.sc100.24 Cpa.g.sc103.73 Cpa.g.sc52.55 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Cpa.g.sc100.24 1
Tree-based orthologmany-to-manyCpa.g.sc100.24 Cpa.g.sc66.89 2
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62001607 AUR62026966 AUR62027376 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manyAUR62027376 AUR62031292 2
Tree-based orthologmany-to-manyAUR62027376 AUR62031292 2
Cicer arietinumOrthologous gene familymany-to-manyCa_00121.g Ca_04575.g Ca_05236.g ...7
Tree-based orthologmany-to-manyCa_00121.g Ca_05236.g 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Ca_05236.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla002146.g Cla006045.g Cla006403.g ...6
Tree-based orthologmany-to-1Cla002146.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cla011078.g 1
Citrus clementinaOrthologous gene familymany-to-manyCiclev10006599m.g Ciclev10006862m.g Ciclev10016831m.g ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Ciclev10016831m.g 1
Tree-based orthologmany-to-1Ciclev10029367m.g 1
Coffea canephoraOrthologous gene familymany-to-manyCc01_g07620 Cc01_g19240 Cc01_g19250 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Cc02_g21750 1
Tree-based orthologmany-to-1Cc02_g21750 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_09062 COL.COLO4_09063 COL.COLO4_11867 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_16459 1
Tree-based orthologmany-to-manyCOL.COLO4_16459 COL.COLO4_33856 COL.COLO4_33864 3
Cucumis meloOrthologous gene familymany-to-manyMELO3C006519 MELO3C012661 MELO3C014396 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1MELO3C015618 1
Tree-based orthologmany-to-1MELO3C022792 1
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.142650 Cucsa.184540 Cucsa.217810 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.142650 1
Tree-based orthologmany-to-1Cucsa.217810 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_002376 DCAR_002719 DCAR_008708 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1DCAR_008708 1
Tree-based orthologmany-to-manyDCAR_008708 DCAR_021847 2
Erythranthe guttataOrthologous gene familymany-to-manyMigut.B00627 Migut.D00322 Migut.D00323 ...8
Tree-based orthologmany-to-manyMigut.B00627 Migut.N01059 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Migut.N01059 1
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.B01056 Eucgr.B03788 Eucgr.H03439 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.B03788 1
Tree-based orthologmany-to-1Eucgr.I02679 1
Fragaria vescaOrthologous gene familymany-to-manyFVE07676 FVE16092 FVE20317 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1FVE16092 1
Tree-based orthologmany-to-manyFVE16092 FVE22080 2
Glycine maxOrthologous gene familymany-to-manyGlyma.01G234900 Glyma.03G156100 Glyma.05G119100 ...12
Tree-based orthologmany-to-manyGlyma.05G119100 Glyma.08G074100 Glyma.15G052200 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Glyma.08G074100 1
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.001G128800 Gorai.004G216700 Gorai.005G044000 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-1Gorai.005G218700 1
Tree-based orthologmany-to-manyGorai.005G218700 Gorai.008G015000 Gorai.009G239800 ...6
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0684G001 HBR0791G001 HBR0791G014 ...16
Best-Hits-and-Inparalogs(BHI)family1-to-manyHBR0684G001 HBR2814G003 2
Tree-based orthologmany-to-manyHBR0684G001 HBR1470G035 HBR2685G003 ...4
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1038.23 MDO.mRNA.g.2181.24 MDO.mRNA.g.2365.4 ...12
Tree-based orthologmany-to-manyMDO.mRNA.g.2181.24 MDO.mRNA.g.2365.4 MDO.mRNA.g.4429.10 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.7715.1 1
Manihot esculentaOrthologous gene familymany-to-manyManes.01G205700 Manes.03G176400 Manes.03G176600 ...10
Tree-based orthologmany-to-manyManes.06G010100 Manes.14G166800 Manes.18G070100 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Manes.14G166800 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0001s0495 Mapoly0030s0151 2
Tree-based orthologmany-to-1Mapoly0001s0495 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0030s0151 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr1g071730 Medtr1g097720 Medtr1g103450 ...11
Tree-based orthologmany-to-manyMedtr2g008560 Medtr2g008580 Medtr5g070360 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Medtr2g008580 1
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_06278 NNU_10765 NNU_14593 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-manyNNU_20220 NNU_22442 2
Tree-based orthologmany-to-manyNNU_20220 NNU_22442 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g59870 LOC_Os03g09230 LOC_Os03g20760 ...15
Tree-based orthologmany-to-1LOC_Os03g09230 1
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os03g20760 1
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00001g10028 Peaxi162Scf00003g03626 Peaxi162Scf00092g00324 ...14
Tree-based orthologmany-to-manyPeaxi162Scf00001g10028 Peaxi162Scf00003g03626 Peaxi162Scf00152g01116 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf00978g00116 1
Physcomitrium patensOrthologous gene familymany-to-manyPp3c10_4720 Pp3c11_11470 Pp3c11_8360 ...10
Tree-based orthologmany-to-manyPp3c10_4720 Pp3c11_11470 Pp3c14_3790 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Pp3c11_11470 1
Picea abiesOrthologous gene familymany-to-manyPAB00011564 PAB00019424 PAB00019478 ...25
Tree-based orthologmany-to-1PAB00011564 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00044423 PAB00052162 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G210100 Potri.002G050300 Potri.002G050400 ...15
Tree-based orthologmany-to-manyPotri.001G210100 Potri.002G092800 Potri.003G020200 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.002G092800 Potri.005G167500 Potri.005G169000 3
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G016900 Prupe.1G512100 Prupe.1G558100 ...6
Tree-based orthologmany-to-manyPrupe.1G512100 Prupe.1G558100 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Prupe.6G152000 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr000881.1.g Pbr002018.1.g Pbr004282.1.g ...11
Tree-based orthologmany-to-manyPbr000881.1.g Pbr002018.1.g Pbr004282.1.g ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1Pbr016060.1.g 1
Ricinus communisOrthologous gene familymany-to-manyRCO.g.28515.000015 RCO.g.29703.000031 RCO.g.29703.000032 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.28515.000015 1
Tree-based orthologmany-to-1RCO.g.29908.000043 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g02110 Tp1g30630 Tp2g27150 ...11
Anchor point1-to-1Tp6g09220 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Tp6g09220 1
Tree-based orthologmany-to-1Tp6g09220 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO118G0559 SMO146G0132 SMO358G0579 ...5
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g105010.2 Solyc03g005200.2 Solyc06g054060.1 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc01g105010.2 1
Tree-based orthologmany-to-1Solyc01g105010.2 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400012567 PGSC0003DMG400013434 PGSC0003DMG400019323 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-1PGSC0003DMG400012567 1
Tree-based orthologmany-to-1PGSC0003DMG400012567 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104800029 THA.LOC104803040 THA.LOC104804409 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-1THA.LOC104806798 1
Tree-based orthologmany-to-1THA.LOC104806798 1
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_004317 TCA.TCM_004321 TCA.TCM_004322 ...8
Tree-based orthologmany-to-manyTCA.TCM_007524 TCA.TCM_034956 2
Best-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_034956 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G13623 TPR.G13625 TPR.G22779 ...9
Tree-based orthologmany-to-manyTPR.G13623 TPR.G13625 TPR.G5732 3
Best-Hits-and-Inparalogs(BHI)family1-to-1TPR.G5732 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00001.164 UGI.Scf00008.1259 UGI.Scf00017.2280 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1UGI.Scf00001.164 1
Tree-based orthologmany-to-1UGI.Scf00001.164 1
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi0374s00110 Vradi03g00990 Vradi08g05230 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Vradi09g03280 1
Tree-based orthologmany-to-manyVradi09g03280 Vradi10g12570 2
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01001177001 GSVIVG01001178001 GSVIVG01018008001 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01029796001 1
Tree-based orthologmany-to-1GSVIVG01029796001 1
Zea maysOrthologous gene familymany-to-manyZm00001d003405 Zm00001d006915 Zm00001d007831 ...15
Tree-based orthologmany-to-manyZm00001d006915 Zm00001d022195 Zm00001d048202 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d048202 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107405552 ZJU.LOC107405557 ZJU.LOC107406095 ...11
Best-Hits-and-Inparalogs(BHI)family1-to-manyZJU.LOC107406095 ZJU.LOC107410372 2
Tree-based orthologmany-to-manyZJU.LOC107420949 ZJU.LOC107427646 2
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