Integrative Orthology Viewer: AL4G28960 (Arabidopsis lyrata) top


Inparalogs

Organism Source Genes #genes Details
Arabidopsis lyrataOrthologous gene familyAL1G13700 AL1G13840 AL1G13850 ...29
Anchor pointAL1G14220 AL7G23900 2
Best-Hits-and-Inparalogs(BHI)familyAL4G28960 1

Orthologs

Organism Source Type Genes #genes Details
Actinidia chinensisOrthologous gene familymany-to-manyAchn017731 Achn018581 Achn029651 ...43
Anchor pointmany-to-manyAchn070831 Achn078421 Achn127211 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyAchn070831 Achn078421 Achn127211 3
Amaranthus hypochondriacusOrthologous gene familymany-to-manyAH000481 AH000504 AH001575 ...20
Best-Hits-and-Inparalogs(BHI)family1-to-manyAH012994 AH022029 2
Amborella trichopodaOrthologous gene familymany-to-manyATR0083G039 ATR0083G052 ATR0099G074 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0787G008 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G04100 AT1G04240 AT1G04250 ...23
Anchor pointmany-to-manyAT1G04100 AT2G33310 AT4G28640 3
Best-Hits-and-Inparalogs(BHI)family1-to-1AT2G33310 1
Arachis ipaensisOrthologous gene familymany-to-manyAraip.07JXH Araip.11643 Araip.179L2 ...20
Best-Hits-and-Inparalogs(BHI)family1-to-1Araip.D9T95 1
Beta vulgarisOrthologous gene familymany-to-manyBv4_082260_dzqn Bv4_082270_xkxh Bv5_104590_hikg ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1Bv7_166630_ngxp 1
Brassica oleraceaOrthologous gene familymany-to-manyBo00834s040 Bo00871s040 Bo01485s010 ...46
Anchor pointmany-to-manyBo3g027240 Bo4g043890 Bo8g002800 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Bo4g043890 1
Brassica rapaOrthologous gene familymany-to-manyBrara.A00565 Brara.A00814 Brara.A00860 ...44
Anchor pointmany-to-manyBrara.A00860 Brara.A03124 Brara.C01700 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Brara.C01700 1
Cajanus cajanOrthologous gene familymany-to-manyC.cajan_00151.g C.cajan_00301.g C.cajan_00334.g ...25
Best-Hits-and-Inparalogs(BHI)family1-to-1C.cajan_06604.g 1
Capsella rubellaOrthologous gene familymany-to-manyCarubv10002085m.g Carubv10005309m.g Carubv10005589m.g ...23
Anchor pointmany-to-manyCarubv10005601m.g Carubv10010148m.g Carubv10023938m.g 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Carubv10023938m.g 1
Capsicum annuumOrthologous gene familymany-to-manyCAN.G1072.2 CAN.G1143.17 CAN.G1230.5 ...27
Best-Hits-and-Inparalogs(BHI)family1-to-1CAN.G524.12 1
Carica papayaOrthologous gene familymany-to-manyCpa.g.c35052 Cpa.g.c44394 Cpa.g.sc10.173 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-1Cpa.g.sc59.6 1
Chenopodium quinoaOrthologous gene familymany-to-manyAUR62001002 AUR62001003 AUR62001004 ...32
Best-Hits-and-Inparalogs(BHI)family1-to-manyAUR62008800 AUR62025439 2
Cicer arietinumOrthologous gene familymany-to-manyCa_01754.g Ca_02782.g Ca_03756.g ...17
Anchor pointmany-to-1Ca_07717.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Ca_07717.g 1
Citrullus lanatusOrthologous gene familymany-to-manyCla002975.g Cla003635.g Cla004102.g ...26
Anchor pointmany-to-manyCla005945.g Cla007621.g Cla021479.g 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Cla007621.g 1
Citrus clementinaOrthologous gene familymany-to-manyCiclev10001479m.g Ciclev10002290m.g Ciclev10002569m.g ...19
Anchor pointmany-to-1Ciclev10005544m.g 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Ciclev10005544m.g 1
Coffea canephoraOrthologous gene familymany-to-manyCc01_g17790 Cc01_g18860 Cc02_g30730 ...15
Anchor pointmany-to-manyCc01_g17790 Cc03_g06400 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cc03_g06400 1
Corchorus olitoriusOrthologous gene familymany-to-manyCOL.COLO4_02955 COL.COLO4_06076 COL.COLO4_06079 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-1COL.COLO4_15973 1
Cucumis meloOrthologous gene familymany-to-manyMELO3C003701 MELO3C004381 MELO3C004382 ...26
Anchor pointmany-to-manyMELO3C006371 MELO3C012839 MELO3C023046 3
Best-Hits-and-Inparalogs(BHI)family1-to-1MELO3C023046 1
Cucumis sativus L.Orthologous gene familymany-to-manyCucsa.004490 Cucsa.036190 Cucsa.103730 ...25
Anchor pointmany-to-manyCucsa.255850 Cucsa.383280 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Cucsa.383280 1
Daucus carotaOrthologous gene familymany-to-manyDCAR_002353 DCAR_002354 DCAR_007554 ...26
Anchor pointmany-to-manyDCAR_012591 DCAR_027352 2
Best-Hits-and-Inparalogs(BHI)family1-to-1DCAR_012591 1
Erythranthe guttataOrthologous gene familymany-to-manyMigut.D00372 Migut.D00373 Migut.D00477 ...21
Anchor pointmany-to-manyMigut.D00477 Migut.N02231 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Migut.G00572 1
Eucalyptus grandisOrthologous gene familymany-to-manyEucgr.C01083 Eucgr.C01373 Eucgr.C01731 ...23
Anchor pointmany-to-1Eucgr.H02914 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Eucgr.H02914 1
Fragaria vescaOrthologous gene familymany-to-manyFVE05555 FVE05990 FVE05993 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-1FVE27891 1
Glycine maxOrthologous gene familymany-to-manyGlyma.01G019400 Glyma.01G039300 Glyma.01G098000 ...53
Anchor pointmany-to-manyGlyma.03G167400 Glyma.10G040400 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyGlyma.10G040400 Glyma.13G127000 2
Gossypium raimondiiOrthologous gene familymany-to-manyGorai.001G043900 Gorai.001G181800 Gorai.001G242800 ...38
Anchor pointmany-to-manyGorai.006G250900 Gorai.007G150000 Gorai.011G180100 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Gorai.011G180100 1
Hevea brasiliensisOrthologous gene familymany-to-manyHBR0141G005 HBR0141G065 HBR0410G018 ...33
Best-Hits-and-Inparalogs(BHI)family1-to-1HBR2145G125 1
Malus domesticaOrthologous gene familymany-to-manyMDO.mRNA.g.1009.21 MDO.mRNA.g.1034.15 MDO.mRNA.g.1034.17 ...36
Best-Hits-and-Inparalogs(BHI)family1-to-1MDO.mRNA.g.1009.21 1
Manihot esculentaOrthologous gene familymany-to-manyManes.01G201600 Manes.01G201700 Manes.03G023800 ...32
Anchor pointmany-to-manyManes.03G158300 Manes.15G046200 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyManes.03G158300 Manes.15G046200 2
Marchantia polymorphaOrthologous gene familymany-to-1Mapoly0034s0017 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0034s0017 1
Medicago truncatulaOrthologous gene familymany-to-manyMedtr1g040675 Medtr1g069495 Medtr1g070520 ...21
Best-Hits-and-Inparalogs(BHI)family1-to-1Medtr1g069495 1
Nelumbo nuciferaOrthologous gene familymany-to-manyNNU_01568 NNU_05259 NNU_10272 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-manyNNU_10272 NNU_10534 2
Anchor pointmany-to-1NNU_10534 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g08320 LOC_Os01g09450 LOC_Os01g13030 ...26
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os02g57250 1
Petunia axillarisOrthologous gene familymany-to-manyPeaxi162Scf00015g00015 Peaxi162Scf00015g00237 Peaxi162Scf00034g01013 ...24
Best-Hits-and-Inparalogs(BHI)family1-to-1Peaxi162Scf01044g00226 1
Physcomitrium patensOrthologous gene familymany-to-manyPp3c24_6610 Pp3c8_14720 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c24_6610 Pp3c8_14720 2
Picea abiesOrthologous gene familymany-to-manyPAB00003764 PAB00009425 PAB00010341 ...24
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00030202 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G177400 Potri.001G177500 Potri.001G186100 ...30
Anchor pointmany-to-manyPotri.008G172400 Potri.010G065200 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Potri.008G172400 1
Prunus persicaOrthologous gene familymany-to-manyPrupe.1G027500 Prupe.1G027600 Prupe.1G049200 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-1Prupe.1G049200 1
Pyrus bretschneideriOrthologous gene familymany-to-manyPbr002447.1.g Pbr003138.1.g Pbr004358.1.g ...24
Best-Hits-and-Inparalogs(BHI)family1-to-1Pbr033107.1.g 1
Ricinus communisOrthologous gene familymany-to-manyRCO.g.28179.000006 RCO.g.29598.000019 RCO.g.29598.000020 ...17
Anchor pointmany-to-1RCO.g.30008.000015 1
Best-Hits-and-Inparalogs(BHI)family1-to-1RCO.g.30008.000015 1
Schrenkiella parvulaOrthologous gene familymany-to-manyTp1g02920 Tp1g03050 Tp1g03060 ...23
Anchor pointmany-to-manyTp1g03380 Tp4g15620 Tp7g26610 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Tp4g15620 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO137G0202 SMO235G0039 SMO347G0211 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO137G0202 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g097290.2 Solyc03g120380.2 Solyc03g120390.2 ...22
Anchor pointmany-to-1Solyc09g090910.1 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc09g090910.1 1
Solanum tuberosumOrthologous gene familymany-to-manyPGSC0003DMG400000375 PGSC0003DMG400001498 PGSC0003DMG400002550 ...23
Anchor pointmany-to-manyPGSC0003DMG400001498 PGSC0003DMG400008586 PGSC0003DMG400029339 3
Best-Hits-and-Inparalogs(BHI)family1-to-1PGSC0003DMG400001498 1
Tarenaya hasslerianaOrthologous gene familymany-to-manyTHA.LOC104798476 THA.LOC104799188 THA.LOC104800383 ...35
Anchor pointmany-to-manyTHA.LOC104814530 THA.LOC104826098 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyTHA.LOC104816008 THA.LOC104826098 2
Theobroma cacaoOrthologous gene familymany-to-manyTCA.TCM_000910 TCA.TCM_003903 TCA.TCM_004212 ...18
Best-Hits-and-Inparalogs(BHI)family1-to-1TCA.TCM_021011 1
Trifolium pratenseOrthologous gene familymany-to-manyTPR.G12893 TPR.G15036 TPR.G15266 ...23
Best-Hits-and-Inparalogs(BHI)family1-to-1TPR.G28140 1
Utricularia gibbaOrthologous gene familymany-to-manyUGI.Scf00009.1400 UGI.Scf00020.2673 UGI.Scf00023.2965 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-1UGI.Scf01546.23555 1
Vigna radiata var. radiataOrthologous gene familymany-to-manyVradi01g03820 Vradi0270s00020 Vradi03g01230 ...24
Best-Hits-and-Inparalogs(BHI)family1-to-1Vradi08g07500 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01000720001 GSVIVG01000721001 GSVIVG01009238001 ...19
Anchor pointmany-to-1GSVIVG01027921001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01027921001 1
Zea maysOrthologous gene familymany-to-manyZm00001d000288 Zm00001d008749 Zm00001d009532 ...36
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d051911 1
Ziziphus jujubaOrthologous gene familymany-to-manyZJU.LOC107404288 ZJU.LOC107406869 ZJU.LOC107412162 ...23
Best-Hits-and-Inparalogs(BHI)family1-to-1ZJU.LOC107422467 1
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