Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Orthologous gene family:
ORTHO04D016226
Keywords
Overview of gene family content
The gene family ORTHO04D016226 has 6 gene(s) in 5 species (0 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D016226
Page 1 of 1, showing 6 records out of 6 total, starting on record 1, ending on 6
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| COL.COLO4_01370 | col | - | AWUE01003854.1 | No |
| COL.COLO4_02347 | col | + | AWUE01005260.1 | No |
| Cre06.g273200 | cre | - | chromosome_6 | No |
| Pp3s34_540 | ppa | - | scaffold_34 | No |
| RCO.g.33152.000001 | rco | - | 33152 | No |
| Solyc00g088210.1 | sly | + | SL2.50ch00 | No |
- << previous
- next >>