Orthologous gene family:
ORTHO04D008852
Keywords
Overview of gene family content
The gene family ORTHO04D008852 has 59 gene(s) in 51 species (2 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D008852
Page 1 of 3, showing 20 records out of 59 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AH016012 | ahy | - | Scaffold_10 | No |
| AL6G21140 | aly | - | scaffold_6 | No |
| AT5G10605 | ath | - | Chr5 | No |
| AT5G10620 | ath | - | Chr5 | No |
| ATR0626G398 | atr | - | AmTr_v1.0_scaffold00025 | No |
| AUR62020630 | cqu | - | C_Quinoa_Scaffold_3966 | No |
| AUR62038752 | cqu | + | C_Quinoa_Scaffold_3144 | No |
| Araip.18J4Y | aip | + | Araip.B06 | No |
| Brara.J02294 | bra | + | A10 | No |
| Brara.J02296 | bra | + | A10 | No |
| Bv2_034960_ykme | bvu | - | Bvchr2.sca006 | No |
| C.cajan_02990.g | ccaj | - | CcLG11 | No |
| C.cajan_04861.g | ccaj | - | CcLG02 | No |
| CAN.G947.13 | can | + | PGAv.1.6.scaffold947 | No |
| COL.COLO4_02059 | col | + | AWUE01004832.1 | No |
| COL.COLO4_18612 | col | + | AWUE01016480.1 | No |
| Ca_10966.g | car | + | Ca4 | No |
| Carubv10002014m.g | cru | - | scaffold_6 | No |
| Cc06_g08830 | ccan | - | chr6 | No |
| Ciclev10009808m.g | ccl | - | scaffold_1 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench