Orthologous gene family:
ORTHO04D008447
Keywords
Overview of gene family content
The gene family ORTHO04D008447 has 61 gene(s) in 45 species (0 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D008447
Page 1 of 4, showing 20 records out of 61 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AL3G32960 | aly | - | scaffold_3 | No |
| AT3G19550 | ath | - | Chr3 | No |
| ATR0030G019 | atr | + | AmTr_v1.0_scaffold00144 | No |
| AUR62027357 | cqu | - | C_Quinoa_Scaffold_4446 | No |
| AUR62031329 | cqu | - | C_Quinoa_Scaffold_4413 | No |
| Achn332211 | ach | + | Chr6 | No |
| Araip.85LK8 | aip | - | Araip.B09 | No |
| Bo1g113560 | bol | + | C1 | No |
| Bo5g114030 | bol | + | C5 | No |
| Brara.A02873 | bra | + | A01 | No |
| Brara.A02875 | bra | + | A01 | No |
| Brara.E02250 | bra | + | A05 | No |
| Bv8_190430_kyod | bvu | + | Bvchr8.sca016 | No |
| C.cajan_07793.g | ccaj | + | CcLG02 | No |
| COL.COLO4_32545 | col | + | AWUE01021130.1 | No |
| Ca_11914.g | car | - | Ca8 | No |
| Carubv10014963m.g | cru | - | scaffold_3 | No |
| Ciclev10029838m.g | ccl | + | scaffold_8 | No |
| Cla016083.g | cla | - | Chr2 | No |
| Cpa.g.sc200.7 | cpa | - | supercontig_200 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench