Orthologous gene family:
ORTHO04D006789
Keywords
Overview of gene family content
The gene family ORTHO04D006789 has 70 gene(s) in 54 species (0 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D006789
Page 1 of 4, showing 20 records out of 70 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AH008948 | ahy | + | Scaffold_5 | No |
| AL8G18860 | aly | - | scaffold_8 | No |
| AT5G42480 | ath | + | Chr5 | No |
| ATR0149G027 | atr | + | AmTr_v1.0_scaffold00182 | No |
| AUR62014423 | cqu | + | C_Quinoa_Scaffold_1566 | No |
| AUR62019159 | cqu | + | C_Quinoa_Scaffold_3876 | No |
| AUR62034574 | cqu | - | C_Quinoa_Scaffold_1522 | No |
| Achn025851 | ach | + | Chr11 | No |
| Achn131141 | ach | - | Unknow | No |
| Araip.QIX9L | aip | + | Araip.B06 | No |
| Bo4g078380 | bol | + | C4 | No |
| Brara.F03845 | bra | - | A06 | No |
| Bv1_006120_oaxr | bvu | + | Bvchr1.sca001 | No |
| C.cajan_31838.g | ccaj | - | Scaffold132771 | No |
| CAN.G1.71 | can | + | PGAv.1.6.scaffold1 | No |
| CAN.G1213.4 | can | + | PGAv.1.6.scaffold1213 | No |
| CAN.G851.6 | can | + | PGAv.1.6.scaffold851 | No |
| COL.COLO4_26194 | col | + | AWUE01019218.1 | No |
| Ca_10764.g | car | - | Ca4 | No |
| Carubv10025901m.g | cru | - | scaffold_8 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench