Orthologous gene family:
ORTHO04D006117
Keywords
Overview of gene family content
The gene family ORTHO04D006117 has 75 gene(s) in 54 species (0 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D006117
Page 1 of 4, showing 20 records out of 75 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AH002420 | ahy | + | Scaffold_1 | No |
| AL5G41540 | aly | - | scaffold_5 | No |
| AL5G41610 | aly | - | scaffold_5 | No |
| AL5G41640 | aly | - | scaffold_5 | No |
| AT3G59630 | ath | - | Chr3 | No |
| ATR0743G025 | atr | - | AmTr_v1.0_scaffold00066 | No |
| AUR62027084 | cqu | - | C_Quinoa_Scaffold_2314 | No |
| AUR62030923 | cqu | - | C_Quinoa_Scaffold_2587 | No |
| Achn209041 | ach | - | Chr1 | No |
| Araip.FT6S0 | aip | + | Araip.B09 | No |
| Bo8g094410 | bol | - | C8 | No |
| Brara.I04097 | bra | - | A09 | No |
| Bv9_222090_zkce | bvu | + | Bvchr9.sca026 | No |
| C.cajan_02982.g | ccaj | + | CcLG11 | No |
| CAN.G128.150 | can | - | PGAv.1.6.scaffold128 | No |
| COL.COLO4_38536 | col | + | AWUE01024871.1 | No |
| Ca_23905.g | car | + | Ca4 | No |
| Carubv10017106m.g | cru | - | scaffold_5 | No |
| Cc00_g21820 | ccan | - | chr0 | No |
| Cc00_g24800 | ccan | - | chr0 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench