Orthologous gene family:
ORTHO04D005958
Keywords
Overview of gene family content
The gene family ORTHO04D005958 has 76 gene(s) in 45 species (5 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D005958
Page 1 of 4, showing 20 records out of 76 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AH011510 | ahy | - | Scaffold_7 | No |
| AH018402 | ahy | - | Scaffold_12 | No |
| AL1G46920 | aly | - | scaffold_1 | No |
| AL4G31210 | aly | + | scaffold_4 | No |
| AT1G32690 | ath | - | Chr1 | No |
| AT2G35200 | ath | + | Chr2 | No |
| ATR0665G540 | atr | + | AmTr_v1.0_scaffold00002 | Yes |
| AUR62007299 | cqu | - | C_Quinoa_Scaffold_1971 | No |
| AUR62018706 | cqu | + | C_Quinoa_Scaffold_1817 | No |
| Achn020841 | ach | - | Chr14 | No |
| Achn084591 | ach | + | Chr26 | No |
| Achn313131 | ach | - | Chr24 | No |
| Araip.H81H9 | aip | - | Araip.B05 | No |
| Bo00825s020 | bol | + | Scaffold00825 | No |
| Bo12457s010 | bol | + | Scaffold12457 | No |
| Bo5g086970 | bol | + | C5 | No |
| Brara.E00917 | bra | - | A05 | No |
| Brara.E01769 | bra | + | A05 | No |
| Bv5_125730_kdyt | bvu | + | Bvchr5_un.sca017 | No |
| Bv5_125740_enpz | bvu | + | Bvchr5_un.sca017 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench