Orthologous gene family:
ORTHO04D005603
Keywords
Overview of gene family content
The gene family ORTHO04D005603 has 79 gene(s) in 50 species (1 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D005603
Page 1 of 4, showing 20 records out of 79 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AH021167 | ahy | + | Scaffold_14 | No |
| AL7G26800 | aly | - | scaffold_7 | No |
| AL8G32610 | aly | - | scaffold_8 | No |
| AL8G32620 | aly | - | scaffold_8 | No |
| AT4G26170 | ath | + | Chr4 | No |
| AT5G56770 | ath | - | Chr5 | No |
| AT5G56780 | ath | - | Chr5 | No |
| ATR0705G152 | atr | + | AmTr_v1.0_scaffold00056 | No |
| AUR62027409 | cqu | - | C_Quinoa_Scaffold_4446 | No |
| AUR62031324 | cqu | - | C_Quinoa_Scaffold_4413 | No |
| Achn156201 | ach | + | Unknow | No |
| Araip.Z2B8F | aip | - | Araip.B05 | No |
| Bo01139s050 | bol | - | Scaffold01139 | No |
| Bo9g126290 | bol | - | C9 | No |
| Brara.A01612 | bra | + | A01 | No |
| Brara.E00156 | bra | - | A05 | No |
| Brara.J01103 | bra | - | A10 | No |
| Bv8_189920_xoyz | bvu | + | Bvchr8.sca015 | No |
| C.cajan_30091.g | ccaj | - | Scaffold134084 | No |
| COL.COLO4_18221 | col | + | AWUE01016436.1 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench