Orthologous gene family:
ORTHO04D005578
Keywords
Overview of gene family content
The gene family ORTHO04D005578 has 79 gene(s) in 54 species (0 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D005578
Page 1 of 4, showing 20 records out of 79 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AH001907 | ahy | - | Scaffold_1 | No |
| AL1G57080 | aly | - | scaffold_1 | No |
| AT1G49670 | ath | - | Chr1 | No |
| ATR0100G011 | atr | - | AmTr_v1.0_scaffold00126 | No |
| ATR0100G042 | atr | - | AmTr_v1.0_scaffold00126 | No |
| AUR62011443 | cqu | - | C_Quinoa_Scaffold_3333 | No |
| AUR62016619 | cqu | + | C_Quinoa_Scaffold_3670 | No |
| Achn232301 | ach | + | Chr6 | No |
| Araip.F3EP7 | aip | - | Araip.B10 | No |
| Bo6g018530 | bol | + | C6 | No |
| Bo8g011210 | bol | - | C8 | No |
| Brara.F00354 | bra | - | A06 | No |
| Brara.H00284 | bra | - | A08 | No |
| Bv9_218750_ekdw | bvu | - | Bvchr9.sca026 | No |
| C.cajan_19991.g | ccaj | - | CcLG01 | No |
| CAN.G1041.24 | can | + | PGAv.1.6.scaffold1041 | No |
| COL.COLO4_32668 | col | + | AWUE01021141.1 | No |
| Ca_06439.g | car | - | Ca6 | No |
| Carubv10008576m.g | cru | - | scaffold_1 | No |
| Cc02_g18690 | ccan | - | chr2 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench