Orthologous gene family:
ORTHO04D002094
Keywords
Overview of gene family content
The gene family ORTHO04D002094 has 158 gene(s) in 55 species (0 outlier gene(s)).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
Create
View
- ...the multiple sequence alignment of this gene family with BioJS
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
Gene list
Index of genes with 1 constraints:
- gene family : ORTHO04D002094
Page 1 of 8, showing 20 records out of 158 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AH015313 | ahy | + | Scaffold_10 | No |
| AH018446 | ahy | - | Scaffold_12 | No |
| AL1G46350 | aly | + | scaffold_1 | No |
| AL6G21270 | aly | - | scaffold_6 | No |
| AL6G26790 | aly | + | scaffold_6 | No |
| AT1G32220 | ath | + | Chr1 | No |
| AT5G10730 | ath | - | Chr5 | No |
| AT5G15910 | ath | + | Chr5 | No |
| ATR0691G165 | atr | - | AmTr_v1.0_scaffold00006 | No |
| ATR0829G202 | atr | + | AmTr_v1.0_scaffold00048 | No |
| AUR62007352 | cqu | - | C_Quinoa_Scaffold_1971 | No |
| AUR62018642 | cqu | + | C_Quinoa_Scaffold_1817 | No |
| AUR62020302 | cqu | - | C_Quinoa_Scaffold_1373 | No |
| AUR62037697 | cqu | + | C_Quinoa_Scaffold_1686 | No |
| Achn013851 | ach | + | Chr20 | No |
| Achn339731 | ach | + | Chr27 | No |
| Araip.48Z21 | aip | + | Araip.B10 | No |
| Araip.C95P2 | aip | - | Araip.B05 | No |
| Bo2g010010 | bol | - | C2 | No |
| Bo2g012850 | bol | + | C2 | No |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench