Tree Explorer: HOM04D001046 
- Viewing
- Species colored phylogenetic tree with associated protein domains.
- Warning
- The edited multiple sequence alignment used to infer the phylogenetic tree is only amino acids long
View...
- basic phylogenetic tree showing speciation/duplication events
- phylogenetic tree with associated protein domains
- phylogenetic tree with associated gene structure information
- phylogenetic tree with associated conserved DNA motifs
Protein domain view
decimals
decimals
for
nodes
node size
domain scale
p value
graph scale
Search (regexp supported):
Download as:
Use your mouse to drag & zoom the tree. Tip: CTRL + wheel = scale Y, ALT + wheel = scale X
Download
Multiple Sequence Alignment information
- Method
- muscle
- Length
-
5653
- Edited length
-
66
Outlier/edited gene information
| Gene id | Status | Cause |
|---|---|---|
| Solyc04g047830.1 | removed | partial |
| Zm00001d010127 | removed | partial |
| Glyma.19G191300 | removed | partial |
| NNU_21027 | removed | partial |
| TCA.TCM_001867 | removed | partial |
| Glyma.09G079800 | removed | partial |
| Potri.003G084600 | removed | partial |
| PAB00041662 | removed | partial |
| DCAR_023273 | removed | partial |
| Solyc04g054870.1 | removed | partial |
| HBR0946G007 | removed | partial |
| PAB00039865 | removed | partial |
| Potri.003G084501 | removed | partial |
| PGSC0003DMG400028264 | removed | partial |
| Medtr2g084845 | removed | partial |
| Araip.81XFD | removed | partial |
| Medtr7g005880 | removed | partial |
| AT4G04957 | removed | partial |
| DCAR_023271 | removed | partial |
| Medtr2g075890 | removed | partial |
| MDO.mRNA.g.5063.4 | removed | partial |
| HBR0946G005 | removed | partial |
| MDO.mRNA.g.2082.21 | removed | partial |
| TCA.TCM_041509 | removed | partial |
| MDO.mRNA.g.1842.2 | removed | partial |
| PAB00009872 | removed | partial |
| Pbr016810.1.g | removed | partial |
| NNU_15711 | removed | partial |
| MDO.mRNA.g.4838.6 | removed | partial |
| Medtr2g008930 | removed | partial |
| Cpa.g.sc5.80 | removed | partial |
| C.cajan_24856.g | removed | partial |
| MDO.mRNA.g.4385.11 | removed | partial |
| Migut.L00220 | removed | outlier |
| THA.LOC104816670 | removed | outlier |
| Cpa.g.sc5.83 | removed | outlier |
| MDO.mRNA.g.3831.2 | removed | outlier |
| MELO3C021452 | removed | outlier |
| Solyc04g054860.1 | removed | outlier |
| Glyma.10G202100 | removed | outlier |
| CAN.G282.14 | removed | outlier |
| Prupe.3G291400 | removed | outlier |
| Medtr6g088650 | removed | outlier |
| MDO.mRNA.g.4385.10 | removed | outlier |
| MDO.mRNA.g.5063.5 | removed | outlier |
| Potri.003G084700 | removed | outlier |
| MELO3C010148 | removed | outlier |
| Potri.003G084800 | removed | outlier |
| MDO.mRNA.g.1170.8 | removed | outlier |
| CAN.G824.26 | removed | outlier |
| MDO.mRNA.g.4838.5 | removed | outlier |
| TCA.TCM_041512 | removed | outlier |
| TCA.TCM_041511 | removed | outlier |
| MDO.mRNA.g.2082.20 | removed | outlier |
| MDO.mRNA.g.3831.3 | removed | outlier |
| Araip.CTL3R | removed | outlier |
| Medtr2g099840 | removed | outlier |
| Solyc04g047810.1 | removed | outlier |
Expansion plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench