Functional clusters   top

Information

Type
GO term
Identifier
GO:0016874
Description
ligase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Prunus persicaPp053CH_ppe_3967430.000316635
Prunus persicaPp054CH_ppe_3967430.000316635
Prunus persicaPp052CH_ppe_2965160.000403783
Prunus persicaPp051CH_ppe_2965160.000403783

Available child term results

Ontology identifier Description Number of clusters
GO:0003883 CTP synthase activity 16
GO:0003910 DNA ligase (ATP) activity 18
GO:0003952 NAD+ synthase (glutamine-hydrolyzing) activity 20
GO:0003972 RNA ligase (ATP) activity 6
GO:0003987 acetate-CoA ligase activity 4
GO:0003996 acyl-CoA ligase activity 2
GO:0004019 adenylosuccinate synthase activity 16
GO:0004055 argininosuccinate synthase activity 30
GO:0004075 biotin carboxylase activity 28
GO:0004326 tetrahydrofolylpolyglutamate synthase activity 12
GO:0004329 formate-tetrahydrofolate ligase activity 2
GO:0004356 glutamate-ammonia ligase activity 12
GO:0004357 glutamate-cysteine ligase activity 18
GO:0004363 glutathione synthase activity 36
GO:0004485 methylcrotonoyl-CoA carboxylase activity 4
GO:0004592 pantoate-beta-alanine ligase activity 4
GO:0004632 phosphopantothenate--cysteine ligase activity 2
GO:0004637 phosphoribosylamine-glycine ligase activity 16
GO:0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity 4
GO:0004641 phosphoribosylformylglycinamidine cyclo-ligase activity 6
GO:0004642 phosphoribosylformylglycinamidine synthase activity 4
GO:0004820 glycine-tRNA ligase activity 4
GO:0004824 lysine-tRNA ligase activity 4
GO:0004829 threonine-tRNA ligase activity 6
GO:0004831 tyrosine-tRNA ligase activity 12
GO:0004839 ubiquitin activating enzyme activity 8
GO:0008716 D-alanine-D-alanine ligase activity 8
GO:0008756 o-succinylbenzoate-CoA ligase activity 4
GO:0008922 long-chain fatty acid [acyl-carrier-protein] ligase activity 4
GO:0010279 indole-3-acetic acid amido synthetase activity 10
GO:0016207 4-coumarate-CoA ligase activity 8
GO:0016851 magnesium chelatase activity 4
GO:0016879 ligase activity, forming carbon-nitrogen bonds 4
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 4
GO:0016992 lipoate synthase activity 4
GO:0018858 benzoate-CoA ligase activity 10
GO:0019781 NEDD8 activating enzyme activity 4
GO:0019948 SUMO activating enzyme activity 2
GO:0030272 5-formyltetrahydrofolate cyclo-ligase activity 4
GO:0031957 very long-chain fatty acid-CoA ligase activity 8
GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity 4
GO:0052625 4-aminobenzoate amino acid synthetase activity 8
GO:0080123 jasmonate-amino synthetase activity 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 GO Primary GO data only. 2 30 80 0.001 X
2 GO Primary GO data only. 2 30 80 0.001 V
3 GO All GO data. 2 30 80 0.001 X
4 GO All GO data. 2 30 80 0.001 V
5 InterPro No filter applied. 2 30 80 0.001 X
6 InterPro No filter applied. 2 30 80 0.001 V