Functional clusters   top


GO term
plasma membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thalianaChr53CH_ath_55415390.000773635
Arabidopsis thalianaChr23CH_ath_56114340.000841146
Cajanus cajanCcLG113CH_ccaj_26311210.000675298
Eucalyptus grandisChr093CH_egr_767880.000347005
Erythranthe guttatascaffold_63CH_egut_18411110.000000807028
Arabidopsis thalianaChr54CH_ath_55415390.000773635
Arabidopsis thalianaChr24CH_ath_56114340.000841146
Cajanus cajanCcLG114CH_ccaj_26311210.000675298
Eucalyptus grandisChr094CH_egr_767880.000347005
Erythranthe guttatascaffold_64CH_egut_18411110.000000807028
Oryza sativa ssp. japonicaChr32CH_osa_40612770.000767451
Ricinus communis299832CH_rco_1345410.0000853332
Oryza sativa ssp. japonicaChr31CH_osa_40612770.000767451
Ricinus communis299831CH_rco_1345410.0000853332

Available child term results

Ontology identifier Description Number of clusters
GO:0000148 1,3-beta-D-glucan synthase complex 2
GO:0005887 integral component of plasma membrane 4
GO:0005901 caveola 8
GO:0009511 plasmodesmatal endoplasmic reticulum 4
GO:0009897 external side of plasma membrane 6
GO:0009925 basal plasma membrane 2
GO:0016324 apical plasma membrane 6
GO:0016328 lateral plasma membrane 4
GO:0019897 extrinsic component of plasma membrane 6
GO:0031226 intrinsic component of plasma membrane 10
GO:0043190 ATP-binding cassette (ABC) transporter complex 4
GO:0044459 plasma membrane part 2
GO:0046658 anchored component of plasma membrane 54

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 GO Primary GO data only. 2 30 80 0.001 X
2 GO Primary GO data only. 2 30 80 0.001 V
3 GO All GO data. 2 30 80 0.001 X
4 GO All GO data. 2 30 80 0.001 V
5 InterPro No filter applied. 2 30 80 0.001 X
6 InterPro No filter applied. 2 30 80 0.001 V