Functional clusters   top

Information

Type
GO term
Identifier
GO:0005525
Description
GTP binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thalianaChr13CH_ath_889410.0000000121672
Capsicum annuumPGAv.1.6.scaffold1003CH_can_448450.000826977
Coffea canephorachr53CH_ccan_289370.000247524
Coffea canephorachr103CH_ccan_3854350.000847243
Citrus clementinascaffold_33CH_ccl_1118254.2943e-28
Chenopodium quinoaC_Quinoa_Scaffold_13543CH_cqu_365580.0000920648
Capsella rubellascaffold_13CH_cru_91660.0000000200039
Capsella rubellascaffold_63CH_cru_256440.000222373
Eucalyptus grandisChr013CH_egr_1320211.96428e-37
Erythranthe guttatascaffold_123CH_egut_82890.000000000009994
Pyrus bretschneideriscaffold25.03CH_pbr_163680.000000548267
Prunus persicaPp023CH_ppe_159660.00000000683756
Populus trichocarpaChr123CH_ptr_6311210.0000000000000446607
Schrenkiella parvulach1-13CH_spa_222450.000758831
Solanum tuberosumST4.03ch063CH_stu_3205100.0000860781
Solanum tuberosumST4.03ch113CH_stu_390450.000284695
Arabidopsis thalianaChr14CH_ath_889410.0000000121672
Capsicum annuumPGAv.1.6.scaffold1004CH_can_448450.000826977
Coffea canephorachr54CH_ccan_289370.000247524
Coffea canephorachr104CH_ccan_3854350.000847243
Citrus clementinascaffold_34CH_ccl_1118254.2943e-28
Chenopodium quinoaC_Quinoa_Scaffold_13544CH_cqu_365580.0000920648
Capsella rubellascaffold_14CH_cru_91660.0000000200039
Capsella rubellascaffold_64CH_cru_256440.000222373
Eucalyptus grandisChr014CH_egr_1320211.96428e-37
Erythranthe guttatascaffold_124CH_egut_82890.000000000009994
Pyrus bretschneideriscaffold25.04CH_pbr_163680.000000548267
Prunus persicaPp024CH_ppe_159660.00000000683756
Populus trichocarpaChr124CH_ptr_6311210.0000000000000446607
Schrenkiella parvulach1-14CH_spa_222450.000758831
Solanum tuberosumST4.03ch064CH_stu_3205100.0000860781
Solanum tuberosumST4.03ch114CH_stu_390450.000284695
Arabidopsis lyratascaffold_12CH_aly_448110.000000000208962
Arabidopsis thalianaChr12CH_ath_749410.0000000101941
Capsicum annuumPGAv.1.6.scaffold1002CH_can_343450.000661384
Coffea canephorachr52CH_ccan_213370.0002149
Coffea canephorachr102CH_ccan_2694350.000701762
Citrus clementinascaffold_32CH_ccl_918251.58306e-28
Chenopodium quinoaC_Quinoa_Scaffold_13542CH_cqu_280580.0000729785
Capsella rubellascaffold_12CH_cru_69660.0000000149002
Capsella rubellascaffold_62CH_cru_181440.000182873
Eucalyptus grandisChr012CH_egr_920215.82709e-38
Erythranthe guttatascaffold_122CH_egut_63890.0000000000062505
Pyrus bretschneideriscaffold25.02CH_pbr_120680.000000419305
Prunus persicaPp022CH_ppe_126660.00000000528039
Prunus persicaPp042CH_ppe_149680.000000145946
Populus trichocarpaChr122CH_ptr_5711210.000000000000026636
Schrenkiella parvulach1-12CH_spa_154450.000597337
Solanum tuberosumST4.03ch062CH_stu_2715100.0000682268
Solanum tuberosumST4.03ch112CH_stu_325450.000236315
Arabidopsis lyratascaffold_11CH_aly_448110.000000000208962
Arabidopsis thalianaChr11CH_ath_749410.0000000101941
Capsicum annuumPGAv.1.6.scaffold1001CH_can_343450.000661384
Coffea canephorachr51CH_ccan_213370.0002149
Coffea canephorachr101CH_ccan_2694350.000701762
Citrus clementinascaffold_31CH_ccl_918251.58306e-28
Chenopodium quinoaC_Quinoa_Scaffold_13541CH_cqu_280580.0000729785
Capsella rubellascaffold_11CH_cru_69660.0000000149002
Capsella rubellascaffold_61CH_cru_181440.000182873
Eucalyptus grandisChr011CH_egr_920215.82709e-38
Erythranthe guttatascaffold_121CH_egut_63890.0000000000062505
Pyrus bretschneideriscaffold25.01CH_pbr_120680.000000419305
Prunus persicaPp021CH_ppe_126660.00000000528039
Prunus persicaPp041CH_ppe_149680.000000145946
Populus trichocarpaChr121CH_ptr_5711210.000000000000026636
Schrenkiella parvulach1-11CH_spa_154450.000597337
Solanum tuberosumST4.03ch061CH_stu_2715100.0000682268
Solanum tuberosumST4.03ch111CH_stu_325450.000236315

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 GO Primary GO data only. 2 30 80 0.001 X
2 GO Primary GO data only. 2 30 80 0.001 V
3 GO All GO data. 2 30 80 0.001 X
4 GO All GO data. 2 30 80 0.001 V
5 InterPro No filter applied. 2 30 80 0.001 X
6 InterPro No filter applied. 2 30 80 0.001 V