Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Search
Gene
GO/InterPro description
Binding site description/sequence
Gene family
All species
Actinidia chinensis
Amaranthus hypochondriacus
Amborella trichopoda
Arabidopsis lyrata
Arabidopsis thaliana
Arachis ipaensis
Beta vulgaris
Brassica oleracea
Brassica rapa
Cajanus cajan
Capsella rubella
Capsicum annuum
Carica papaya
Chenopodium quinoa
Chlamydomonas reinhardtii
Cicer arietinum
Citrullus lanatus
Citrus clementina
Coffea canephora
Corchorus olitorius
Cucumis melo
Cucumis sativus L.
Daucus carota
Erythranthe guttata
Eucalyptus grandis
Fragaria vesca
Glycine max
Gossypium raimondii
Hevea brasiliensis
Malus domestica
Manihot esculenta
Marchantia polymorpha
Medicago truncatula
Micromonas commoda
Nelumbo nucifera
Oryza sativa ssp. japonica
Petunia axillaris
Physcomitrium patens
Picea abies
Populus trichocarpa
Prunus persica
Pyrus bretschneideri
Ricinus communis
Schrenkiella parvula
Selaginella moellendorffii
Solanum lycopersicum
Solanum tuberosum
Tarenaya hassleriana
Theobroma cacao
Trifolium pratense
Utricularia gibba
Vigna radiata var. radiata
Vitis vinifera
Zea mays
Ziziphus jujuba
Dicots PLAZA 4.5
Functional clusters:
Coffea canephora
Overview
Organism
Coffea canephora
Overview
Full data overview and download
Options
Chromosome
chr3
chr4
chr6
chr2
chr10
chr5
chr2
chr7
chr4
chr11
chr2
chr5
chr5
chr2
chr7
chr1
chr7
chr0
chr2
chr2
chr10
chr8
chr4
chr9
chr2
chr0
chr3
chr5
chr8
chr7
chr11
chr4
chr10
chr5
chr1
chr8
chr2
chr10
chr0
chr7
chr7
chr6
chr5
chr8
chr2
chr5
chr9
chr11
chr9
chr10
chr10
chr6
chr1
chr4
chr10
chr6
chr6
chr8
chr1
chr6
chr3
chr7
chr4
chr7
chr2
chr8
chr10
chr2
chr7
chr11
chr3
chr0
chr1
chr2
chr3
chr10
chr8
chr0
chr2
chr2
chr3
chr6
chr1
chr2
chr10
chr2
chr3
chr7
chr2
chr0
chr2
chr6
chr1
chr7
chr1
chr6
chr5
chr10
chr4
chr2
chr4
chr0
chr4
chr3
chr1
chr7
chr6
chr11
chr7
chr8
chr7
chr7
chr7
chr7
chr6
chr5
chr5
chr3
chr5
chr10
chr9
chr2
chr0
chr0
chr0
chr3
chr10
chr4
chr11
chr7
chr2
chr2
chr3
chr2
chr0
chr2
chr7
chr1
chr11
chr2
chr7
chr7
chr4
chr5
chr3
chr10
chr3
chr5
chr4
chr5
chr2
chr2
chr11
chr4
chr9
chr6
chr3
chr5
chr9
chr2
chr0
chr2
chr3
chr2
chr2
chr4
chr9
chr3
chr9
chr1
chr11
chr5
chr2
chr5
chr1
chr1
chr9
chr2
chr3
chr1
chr8
chr11
chr7
chr5
chr8
chr2
chr2
chr4
chr6
chr11
chr6
chr5
chr1
chr2
chr7
chr7
chr2
chr1
chr1
chr3
chr0
chr0
chr10
chr5
chr10
chr0
chr9
chr11
chr8
chr2
chr0
chr2
chr8
chr3
chr11
chr7
chr2
chr5
chr0
chr5
chr8
chr6
chr1
chr0
chr3
chr2
chr2
chr2
chr8
chr6
chr8
chr1
chr9
chr4
chr2
chr2
chr3
chr7
chr7
chr7
chr2
chr10
chr4
chr9
chr1
chr5
chr7
chr1
chr4
chr7
chr8
chr7
chr8
chr8
chr6
chr2
chr10
chr0
chr5
chr2
chr2
chr10
chr3
chr6
chr1
chr2
chr8
chr11
chr11
chr8
chr3
chr9
chr9
chr9
chr9
chr1
chr10
chr9
chr0
chr2
chr11
chr5
chr9
chr10
chr4
chr2
chr6
chr9
chr10
chr11
chr2
chr7
chr6
chr2
chr5
chr10
chr0
chr6
chr8
chr11
chr2
chr9
chr2
chr3
chr10
chr4
chr2
chr11
chr1
chr6
chr10
chr2
chr10
chr11
chr2
chr11
chr7
chr0
chr9
chr0
chr10
chr4
chr6
chr2
chr6
chr2
chr2
chr9
chr4
chr0
chr7
chr0
chr0
chr6
chr7
chr7
chr9
chr7
chr7
chr6
chr1
chr6
chr8
chr3
chr5
chr7
chr3
chr6
chr2
chr7
chr4
chr7
chr0
chr11
chr8
chr2
chr0
chr7
chr2
chr11
chr4
chr2
chr3
chr9
chr10
chr5
chr2
chr4
chr4
chr6
chr5
chr3
chr2
chr2
chr9
chr6
chr6
chr2
chr7
chr4
chr7
chr2
chr6
chr6
chr7
chr5
chr6
chr3
chr6
chr2
chr7
chr4
chr4
chr0
chr3
chr5
chr11
chr10
chr0
chr1
chr0
chr1
chr6
chr3
chr1
chr11
chr9
chr2
chr6
chr5
chr7
chr2
chr11
chr9
chr6
chr2
chr2
chr11
chr2
chr4
chr1
chr10
chr10
chr10
chr6
chr11
chr0
chr10
chr8
chr11
chr11
chr5
chr2
chr6
chr10
chr2
chr8
chr1
chr1
chr6
chr7
chr8
chr4
chr6
chr6
chr8
chr0
chr5
chr11
chr11
chr2
chr3
chr8
chr2
chr9
chr10
chr1
chr2
chr2
chr2
chr2
chr7
chr3
chr6
chr11
chr9
chr7
chr9
chr5
chr10
chr3
chr5
chr4
chr8
chr7
chr4
chr0
chr2
chr11
chr6
chr1
chr7
chr10
chr3
chr2
chr3
chr6
chr7
chr1
chr2
chr4
chr4
chr9
chr10
chr10
chr2
chr5
chr2
chr5
chr3
chr3
chr9
chr8
chr6
chr11
chr2
chr10
chr7
chr10
chr6
chr6
chr10
chr7
chr9
chr8
chr6
chr5
chr10
chr8
chr10
chr11
chr9
chr10
chr0
chr2
chr10
chr9
chr9
chr8
chr6
chr6
chr7
chr5
chr1
chr8
chr4
chr6
chr6
chr11
chr0
chr1
chr5
chr3
chr10
chr7
chr2
chr10
chr7
chr7
chr7
chr0
chr6
chr6
chr2
chr10
chr4
chr5
chr2
chr1
chr2
chr10
chr3
chr2
chr11
chr11
chr7
chr11
chr5
chr2
chr2
chr6
chr11
chr2
chr3
chr7
chr2
chr5
chr10
chr6
chr4
chr2
chr2
chr2
chr0
chr3
chr10
chr5
chr1
chr2
chr4
chr11
chr3
chr4
chr4
chr7
chr1
chr2
chr1
chr4
chr10
chr3
chr2
chr7
chr8
chr1
chr6
chr4
chr2
chr0
chr11
chr2
chr0
chr0
chr4
chr2
chr7
chr7
chr6
chr4
chr5
chr8
chr10
chr10
chr0
chr7
chr10
chr3
chr2
chr6
chr3
chr8
chr0
chr8
chr8
chr5
chr1
chr6
chr7
chr0
chr6
chr4
chr1
Filter
No filter
Family
Domain
Active site
Repeat
Binding site
Conserved site
PTM
Chromosomal Overview
Functional Clusters Experiments
Exp id
Data type
Data filter
Min genes cluster
Max genes cluster
Max cluster size
E-value
Tandems removal
1
GO
Primary GO data only.
2
30
80
0.001
X
2
GO
Primary GO data only.
2
30
80
0.001
V
3
GO
All GO data.
2
30
80
0.001
X
4
GO
All GO data.
2
30
80
0.001
V
5
InterPro
No filter applied.
2
30
80
0.001
X
6
InterPro
No filter applied.
2
30
80
0.001
V