Interactive Phylogenetics Module

Gene Id
Zm00001d046532

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d046532 Zea mays HOM04D001436 ORTHO04D004292 9.2e-165 582.4 290 100.0
Zm00001d029954 Zea mays HOM04D001436 ORTHO04D004292 6.4e-49 197.6 98 95.9
Zm00001d036741 Zea mays HOM04D001436 ORTHO04D004292 1.7e-33 146.4 76 88.2
Zm00001d003744 Zea mays HOM04D000965 ORTHO04D007443 7.1e-32 141.0 77 89.6
LOC_Os06g43760 Oryza sativa ssp. japonica HOM04D001436 ORTHO04D004292 2.1e-31 139.4 76 81.6
FVE22397 Fragaria vesca HOM04D001436 ORTHO04D004292 5.8e-26 121.3 126 46.8
ATR0789G163 Amborella trichopoda HOM04D001436 ORTHO04D004292 7.6e-26 120.9 76 67.1
AL6G44170 Arabidopsis lyrata HOM04D001436 ORTHO04D004292 8.4e-25 117.5 76 65.8
TPR.G13745 Trifolium pratense HOM04D001436 ORTHO04D004292 1.9e-24 116.3 76 68.4
Ciclev10018576m.g Citrus clementina HOM04D001436 ORTHO04D004292 1.9e-24 116.3 76 67.1
Pbr006432.1.g Pyrus bretschneideri HOM04D001436 ORTHO04D004292 1.9e-24 116.3 78 65.4
COL.COLO4_14418 Corchorus olitorius HOM04D001436 ORTHO04D004292 3.2e-24 115.5 76 68.4
AT4G10320 Arabidopsis thaliana HOM04D001436 ORTHO04D004292 5.5e-24 114.8 76 64.5
Pbr006501.1.g Pyrus bretschneideri HOM04D001436 ORTHO04D004292 5.5e-24 114.8 78 64.1
Ca_11150.g Cicer arietinum HOM04D001436 ORTHO04D004292 7.1e-24 114.4 76 67.1
Medtr4g076850 Medicago truncatula HOM04D001436 ORTHO04D004292 7.1e-24 114.4 76 67.1
Brara.D01213 Brassica rapa HOM04D001436 ORTHO04D004292 7.1e-24 114.4 76 65.8
Bo4g142620 Brassica oleracea HOM04D001436 ORTHO04D004292 7.1e-24 114.4 76 65.8
DCAR_019070 Daucus carota HOM04D001436 ORTHO04D004292 7.1e-24 114.4 80 62.5
Carubv10015963m.g Capsella rubella HOM04D001436 ORTHO04D004292 9.3e-24 114.0 76 64.5
Tp7g00280 Schrenkiella parvula HOM04D001436 ORTHO04D004292 1.2e-23 113.6 76 65.8
Cla010855.g Citrullus lanatus HOM04D001436 ORTHO04D004292 1.2e-23 113.6 76 65.8
MELO3C017728 Cucumis melo HOM04D001436 ORTHO04D004292 1.2e-23 113.6 76 65.8
TCA.TCM_021556 Theobroma cacao HOM04D001436 ORTHO04D004292 1.2e-23 113.6 76 64.5
Prupe.1G186600 Prunus persica HOM04D001436 ORTHO04D004292 2.1e-23 112.8 76 65.8
Achn238121 Actinidia chinensis HOM04D001436 ORTHO04D004292 2.1e-23 112.8 68 69.1
Potri.017G033200 Populus trichocarpa HOM04D001436 ORTHO04D004292 2.7e-23 112.5 76 67.1
Cucsa.094940 Cucumis sativus L. HOM04D001436 ORTHO04D004292 2.7e-23 112.5 76 64.5
Carubv10000080m.g Capsella rubella HOM04D001436 ORTHO04D004292 3.5e-23 112.1 76 63.2
LOC_Os02g09120 Oryza sativa ssp. japonica HOM04D001436 ORTHO04D004292 3.5e-23 112.1 77 59.7
Bo6g027950 Brassica oleracea HOM04D001436 ORTHO04D004292 6.0e-23 111.3 76 63.2
MDO.mRNA.g.1631.65 Malus domestica HOM04D001436 ORTHO04D004292 6.0e-23 111.3 65 70.8
HBR2591G007 Hevea brasiliensis HOM04D001436 ORTHO04D004292 1.0e-22 110.5 76 61.8
GSVIVG01010735001 Vitis vinifera HOM04D001436 ORTHO04D004292 1.3e-22 110.2 65 69.2
PAB00060770 Picea abies HOM04D001436 ORTHO04D004292 1.3e-22 110.2 84 59.5
Pbr002749.2.g Pyrus bretschneideri HOM04D001436 ORTHO04D004292 1.8e-22 109.8 76 63.2
MDO.mRNA.g.430.29 Malus domestica HOM04D001436 ORTHO04D004292 1.8e-22 109.8 76 63.2
Pbr028139.1.g Pyrus bretschneideri HOM04D001436 ORTHO04D004292 1.8e-22 109.8 76 63.2
Achn334931 Actinidia chinensis HOM04D001436 ORTHO04D004292 2.3e-22 109.4 65 67.7
PGSC0003DMG400013343 Solanum tuberosum HOM04D001436 ORTHO04D004292 3.0e-22 109.0 77 63.6
Cpa.g.sc32.3 Carica papaya HOM04D001436 ORTHO04D004292 5.1e-22 108.2 65 67.7
CAN.G1186.25 Capsicum annuum HOM04D001436 ORTHO04D004292 5.1e-22 108.2 76 63.2
Brara.C04605 Brassica rapa HOM04D001436 ORTHO04D004292 5.1e-22 108.2 92 53.3
MCO01G256 Micromonas commoda HOM04D001436 ORTHO04D004292 8.7e-22 107.5 65 69.2
Bo7g107870 Brassica oleracea HOM04D001436 ORTHO04D004292 1.1e-21 107.1 92 52.2
Bv3_054810_nunz Beta vulgaris HOM04D001436 ORTHO04D004292 1.5e-21 106.7 76 60.5
Zm00001d051713 Zea mays HOM04D012698 ORTHO04D276924 3.3e-21 105.5 64 84.4
Zm00001d000444 Zea mays HOM04D001554 ORTHO04D004292 3.3e-21 105.5 50 96.0
Solyc11g012140.1 Solanum lycopersicum HOM04D001436 ORTHO04D004292 3.3e-21 105.5 77 61.0
AUR62002268 Chenopodium quinoa HOM04D001436 ORTHO04D004292 4.3e-21 105.1 76 59.2
Migut.D00680 Erythranthe guttata HOM04D001436 ORTHO04D004292 9.6e-21 104.0 76 59.2
RCO.g.30169.000114 Ricinus communis HOM04D001436 ORTHO04D004292 1.6e-20 103.2 65 64.6
Peaxi162Scf00558g00043 Petunia axillaris HOM04D001436 ORTHO04D004292 1.6e-20 103.2 76 61.8
AUR62015426 Chenopodium quinoa HOM04D001436 ORTHO04D004292 2.8e-20 102.4 76 57.9
AH019971 Amaranthus hypochondriacus HOM04D001436 ORTHO04D004292 4.0e-19 98.6 76 57.9
Cre16.g651750 Chlamydomonas reinhardtii HOM04D001436 ORTHO04D004292 1.5e-18 96.7 65 61.5
Zm00001d013859 Zea mays HOM04D000236 ORTHO04D001165 2.6e-18 95.9 57 89.5
Zm00001d052931 Zea mays HOM04D000965 ORTHO04D007443 2.6e-18 95.9 55 87.3
Pp3c16_16950 Physcomitrium patens HOM04D001436 ORTHO04D004292 2.6e-18 95.9 65 61.5
NNU_05644 Nelumbo nucifera HOM04D001436 ORTHO04D004292 5.8e-18 94.7 76 57.9
Zm00001d032464 Zea mays HOM04D000236 ORTHO04D001165 7.6e-18 94.4 57 87.7
Mapoly0045s0031 Marchantia polymorpha HOM04D001436 ORTHO04D004292 7.6e-18 94.4 76 55.3
SMO200G0022 Selaginella moellendorffii HOM04D001436 ORTHO04D004292 2.2e-17 92.8 69 58.0
LOC_Os10g36880 Oryza sativa ssp. japonica HOM04D000236 ORTHO04D001165 4.9e-17 91.7 57 86.0
Zm00001d041475 Zea mays HOM04D002710 ORTHO04D003770 1.9e-16 89.7 139 43.9
Gorai.002G267700 Gossypium raimondii HOM04D001436 ORTHO04D004292 5.5e-16 88.2 76 55.3
Eucgr.H00404 Eucalyptus grandis HOM04D001436 ORTHO04D004292 3.0e-14 82.4 40 87.5
Cc04_g11170 Coffea canephora HOM04D001436 ORTHO04D004292 1.5e-13 80.1 47 70.2
Glyma.12G020700 Glycine max HOM04D001436 ORTHO04D004292 2.5e-13 79.3 40 85.0
THA.LOC104803625 Tarenaya hassleriana HOM04D001436 ORTHO04D004292 7.4e-13 77.8 40 77.5
Araip.5TB63 Arachis ipaensis HOM04D001436 ORTHO04D004292 1.3e-12 77.0 40 82.5
C.cajan_21035.g Cajanus cajan HOM04D001436 ORTHO04D004292 2.8e-12 75.9 40 80.0
Potri.007G126500 Populus trichocarpa HOM04D001436 ORTHO04D004292 3.7e-12 75.5 41 78.0
Glyma.11G094300 Glycine max HOM04D001436 ORTHO04D004292 3.7e-12 75.5 40 80.0
RCO.g.29657.000010 Ricinus communis HOM04D001436 ORTHO04D004292 3.7e-12 75.5 41 78.0
HBR0384G005 Hevea brasiliensis HOM04D001436 ORTHO04D004292 4.8e-12 75.1 40 77.5
Manes.04G040600 Manihot esculenta HOM04D001436 ORTHO04D004292 4.8e-12 75.1 40 77.5
AL7G50050 Arabidopsis lyrata HOM04D001436 ORTHO04D004292 6.3e-12 74.7 38 81.6
ZJU.LOC107419569 Ziziphus jujuba HOM04D001436 ORTHO04D004292 1.1e-11 73.9 40 77.5
COL.COLO4_24691 Corchorus olitorius HOM04D001436 ORTHO04D004292 1.1e-11 73.9 40 80.0
COL.COLO4_09454 Corchorus olitorius HOM04D001436 ORTHO04D004292 5.3e-11 71.6 40 72.5
Eucgr.I01311 Eucalyptus grandis HOM04D000236 ORTHO04D001165 2.6e-10 69.3 57 64.9
Manes.04G085200 Manihot esculenta HOM04D000236 ORTHO04D001165 6.5e-09 64.7 59 57.6
TPR.G16212 Trifolium pratense HOM04D000236 ORTHO04D001165 1.9e-08 63.2 57 56.1
ATR0661G585 Amborella trichopoda HOM04D000236 ORTHO04D001165 3.2e-08 62.4 42 76.2
Potri.009G122100 Populus trichocarpa HOM04D000236 ORTHO04D001165 3.2e-08 62.4 56 57.1
Ca_15413.g Cicer arietinum HOM04D000236 ORTHO04D001165 4.2e-08 62.0 56 55.4
Glyma.12G038600 Glycine max HOM04D000236 ORTHO04D001165 4.2e-08 62.0 55 65.5
Gorai.002G004600 Gossypium raimondii HOM04D000236 ORTHO04D001165 5.5e-08 61.6 56 62.5
Araip.4JD4I Arachis ipaensis HOM04D000236 ORTHO04D001165 5.5e-08 61.6 56 53.6
Glyma.11G112700 Glycine max HOM04D000236 ORTHO04D001165 7.2e-08 61.2 54 61.1
Zm00001d046181 Zea mays HOM04D012698 ORTHO04D275726 9.3e-08 60.8 38 81.6
Pbr015821.1.g Pyrus bretschneideri HOM04D000236 ORTHO04D001165 9.3e-08 60.8 56 57.1
Cpa.g.sc150.41 Carica papaya HOM04D000236 ORTHO04D001165 1.6e-07 60.1 76 43.4
Zm00001d041969 Zea mays HOM04D004720 ORTHO04D005839 1.6e-07 60.1 35 80.0
Migut.B00190 Erythranthe guttata HOM04D000236 ORTHO04D001165 2.1e-07 59.7 42 71.4
MDO.mRNA.g.5007.6 Malus domestica HOM04D000236 ORTHO04D001165 2.1e-07 59.7 56 55.4
Bo3g149780 Brassica oleracea HOM04D000236 ORTHO04D001165 3.6e-07 58.9 58 55.2
Glyma.06G009000 Glycine max HOM04D000236 ORTHO04D001165 3.6e-07 58.9 56 53.6
Vradi02g03050 Vigna radiata var. radiata HOM04D000236 ORTHO04D001165 4.6e-07 58.5 42 71.4
Medtr4g071210 Medicago truncatula HOM04D000236 ORTHO04D001165 4.6e-07 58.5 54 55.6
Zm00001d031733 Zea mays HOM04D012698 ORTHO04D275532 4.6e-07 58.5 38 78.9
Bo8g101810 Brassica oleracea HOM04D000236 ORTHO04D001165 6.1e-07 58.2 43 69.8
Bo7g119380 Brassica oleracea HOM04D000236 ORTHO04D001165 7.9e-07 57.8 67 47.8
Cla016598.g Citrullus lanatus HOM04D000236 ORTHO04D001165 7.9e-07 57.8 57 57.9
Achn005811 Actinidia chinensis HOM04D000236 ORTHO04D001165 1.0e-06 57.4 56 55.4
COL.COLO4_26016 Corchorus olitorius HOM04D000236 ORTHO04D001165 1.3e-06 57.0 42 69.0
AL7G10990 Arabidopsis lyrata HOM04D000236 ORTHO04D001165 1.8e-06 56.6 42 69.0
AT4G39050 Arabidopsis thaliana HOM04D000236 ORTHO04D001165 1.8e-06 56.6 42 69.0
Peaxi162Scf00684g00222 Petunia axillaris HOM04D000236 ORTHO04D001165 2.3e-06 56.2 42 66.7
LOC_Os03g42050 Oryza sativa ssp. japonica HOM04D003223 ORTHO04D004313 2.3e-06 56.2 33 75.8
LOC_Os01g73890 Oryza sativa ssp. japonica HOM04D004720 ORTHO04D005839 2.3e-06 56.2 35 74.3
MELO3C023342 Cucumis melo HOM04D000236 ORTHO04D001165 3.0e-06 55.8 42 66.7
AT2G21380 Arabidopsis thaliana HOM04D000236 ORTHO04D001165 3.9e-06 55.5 51 62.7
THA.LOC104807759 Tarenaya hassleriana HOM04D000236 ORTHO04D001165 5.1e-06 55.1 42 66.7
Prupe.8G087800 Prunus persica HOM04D000236 ORTHO04D001165 6.7e-06 54.7 56 51.8
FVE01622 Fragaria vesca HOM04D000236 ORTHO04D001165 6.7e-06 54.7 56 51.8
CAN.G1.58 Capsicum annuum HOM04D000236 ORTHO04D001165 6.7e-06 54.7 42 64.3
Zm00001d025071 Zea mays HOM04D012698 ORTHO04D276190 6.7e-06 54.7 38 73.7
Zm00001d051401 Zea mays HOM04D012698 ORTHO04D276559 6.7e-06 54.7 38 73.7
Cucsa.109240 Cucumis sativus L. HOM04D000236 ORTHO04D001165 8.7e-06 54.3 42 64.3

Actinidia chinensis (3 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (2 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (3 genes)
Arachis ipaensis (2 genes)
Beta vulgaris (1 genes)
Brassica oleracea (6 genes)
Brassica rapa (2 genes)
Cajanus cajan (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Carica papaya (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (4 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (2 genes)
Fragaria vesca (2 genes)
Glycine max (5 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (2 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (5 genes)
Petunia axillaris (2 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (3 genes)
Prunus persica (2 genes)
Pyrus bretschneideri (5 genes)
Ricinus communis (2 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Utricularia gibba (0 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (15 genes)
Ziziphus jujuba (1 genes)

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