Interactive Phylogenetics Module

Gene Id
Zm00001d041962

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d041962 Zea mays HOM04D005159 ORTHO04D006368 4.5e-209 729.9 362 100.0
LOC_Os01g74000 Oryza sativa ssp. japonica HOM04D005159 ORTHO04D006368 1.2e-166 589.0 351 85.5
DCAR_011275 Daucus carota HOM04D005159 ORTHO04D006368 1.5e-148 528.9 361 72.3
Manes.15G153800 Manihot esculenta HOM04D005159 ORTHO04D006368 2.0e-148 528.5 358 72.3
HBR1055G059 Hevea brasiliensis HOM04D005159 ORTHO04D006368 3.4e-148 527.7 358 71.8
GSVIVG01003989001 Vitis vinifera HOM04D005159 ORTHO04D006368 5.7e-148 526.9 358 72.3
Ciclev10015567m.g Citrus clementina HOM04D005159 ORTHO04D006368 4.9e-147 523.9 360 71.1
ATR0824G013 Amborella trichopoda HOM04D005159 ORTHO04D006368 1.4e-146 522.3 364 71.4
TCA.TCM_017024 Theobroma cacao HOM04D005159 ORTHO04D006368 2.7e-145 518.1 352 73.0
COL.COLO4_29204 Corchorus olitorius HOM04D005159 ORTHO04D006368 3.0e-144 514.6 352 72.7
Gorai.006G036200 Gossypium raimondii HOM04D005159 ORTHO04D006368 5.0e-144 513.8 353 72.2
PGSC0003DMG400006965 Solanum tuberosum HOM04D005159 ORTHO04D006368 6.6e-144 513.5 352 71.6
Vradi01g08300 Vigna radiata var. radiata HOM04D005159 ORTHO04D006368 1.5e-143 512.3 345 73.9
Eucgr.J02265 Eucalyptus grandis HOM04D005159 ORTHO04D006368 2.5e-143 511.5 351 72.1
RCO.g.29633.000036 Ricinus communis HOM04D005159 ORTHO04D006368 3.3e-143 511.1 350 70.6
MELO3C021604 Cucumis melo HOM04D005159 ORTHO04D006368 7.3e-143 510.0 357 70.6
Cla004639.g Citrullus lanatus HOM04D005159 ORTHO04D006368 1.6e-142 508.8 356 71.3
Solyc02g067930.2 Solanum lycopersicum HOM04D005159 ORTHO04D006368 2.1e-142 508.4 352 71.3
Potri.017G070900 Populus trichocarpa HOM04D005159 ORTHO04D006368 6.2e-142 506.9 350 71.7
CAN.G1057.16 Capsicum annuum HOM04D005159 ORTHO04D006368 1.0e-141 506.1 352 70.5
FVE27988 Fragaria vesca HOM04D005159 ORTHO04D006368 1.4e-141 505.8 347 71.5
Pbr012522.1.g Pyrus bretschneideri HOM04D005159 ORTHO04D006368 4.0e-141 504.2 349 70.8
Pbr014496.1.g Pyrus bretschneideri HOM04D005159 ORTHO04D006368 4.0e-141 504.2 349 70.8
Migut.K01420 Erythranthe guttata HOM04D005159 ORTHO04D006368 4.0e-141 504.2 341 73.9
Cucsa.011050 Cucumis sativus L. HOM04D005159 ORTHO04D006368 5.2e-141 503.8 385 66.2
Prupe.3G296200 Prunus persica HOM04D005159 ORTHO04D006368 1.5e-140 502.3 349 70.2
Cc07_g00150 Coffea canephora HOM04D005159 ORTHO04D006368 2.0e-140 501.9 341 72.7
ZJU.LOC107415257 Ziziphus jujuba HOM04D005159 ORTHO04D006368 3.4e-140 501.1 342 71.9
Ca_14695.g Cicer arietinum HOM04D005159 ORTHO04D006368 1.3e-139 499.2 345 71.6
Bo6g064600 Brassica oleracea HOM04D005159 ORTHO04D006368 3.7e-139 497.7 349 70.8
Peaxi162Scf00080g01518 Petunia axillaris HOM04D005159 ORTHO04D006368 3.7e-139 497.7 354 70.1
Carubv10004974m.g Capsella rubella HOM04D005159 ORTHO04D006368 3.7e-139 497.7 349 69.9
Araip.Y3JJL Arachis ipaensis HOM04D005159 ORTHO04D006368 6.4e-139 496.9 342 71.9
AT5G40610 Arabidopsis thaliana HOM04D005159 ORTHO04D006368 6.4e-139 496.9 349 70.2
THA.LOC104825312 Tarenaya hassleriana HOM04D005159 ORTHO04D006368 1.1e-138 496.1 342 70.8
Glyma.19G053500 Glycine max HOM04D005159 ORTHO04D006368 1.9e-138 495.4 345 72.2
AL7G49190 Arabidopsis lyrata HOM04D005159 ORTHO04D006368 4.1e-138 494.2 349 69.6
Tp7g01260 Schrenkiella parvula HOM04D005159 ORTHO04D006368 7.0e-138 493.4 344 70.6
Bo4g140370 Brassica oleracea HOM04D005159 ORTHO04D006368 9.2e-138 493.0 349 69.1
Brara.D01081 Brassica rapa HOM04D005159 ORTHO04D006368 1.7e-136 488.8 349 68.8
THA.LOC104805357 Tarenaya hassleriana HOM04D005159 ORTHO04D006368 1.1e-135 486.1 351 68.7
C.cajan_00927.g Cajanus cajan HOM04D005159 ORTHO04D006368 1.7e-131 472.2 359 66.0
TPR.G1131 Trifolium pratense HOM04D005159 ORTHO04D006368 6.4e-131 470.3 346 66.5
Gorai.012G066600 Gossypium raimondii HOM04D005159 ORTHO04D006368 2.4e-130 468.4 370 64.6
Glyma.19G079400 Glycine max HOM04D005159 ORTHO04D006368 3.2e-130 468.0 346 67.6
DCAR_021744 Daucus carota HOM04D005159 ORTHO04D006368 4.6e-129 464.2 353 65.2
SMO244G0041 Selaginella moellendorffii HOM04D005159 ORTHO04D006368 4.6e-129 464.2 348 67.5
AUR62041297 Chenopodium quinoa HOM04D005159 ORTHO04D006368 3.9e-128 461.1 350 66.6
AH007818 Amaranthus hypochondriacus HOM04D005159 ORTHO04D006368 5.1e-128 460.7 344 67.2
Medtr7g032630 Medicago truncatula HOM04D005159 ORTHO04D006368 8.6e-128 459.9 341 67.4
Achn307301 Actinidia chinensis HOM04D005159 ORTHO04D006368 1.5e-127 459.1 344 68.0
Glyma.05G114400 Glycine max HOM04D005159 ORTHO04D006368 4.3e-127 457.6 345 67.8
Bv4_094790_ouwp Beta vulgaris HOM04D005159 ORTHO04D006368 5.2e-125 450.7 344 65.1
Brara.G01487 Brassica rapa HOM04D005159 ORTHO04D006368 1.3e-120 436.0 342 65.5
Pp3c15_11110 Physcomitrium patens HOM04D005159 ORTHO04D006368 1.2e-118 429.5 360 60.3
Medtr6g021915 Medicago truncatula HOM04D005159 ORTHO04D006368 8.1e-118 426.8 333 64.6
TPR.G21634 Trifolium pratense HOM04D005159 ORTHO04D006368 1.2e-116 422.9 297 70.7
Vradi0007s01990 Vigna radiata var. radiata HOM04D005159 ORTHO04D006368 2.2e-115 418.7 345 63.5
Pbr032239.1.g Pyrus bretschneideri HOM04D005159 ORTHO04D006368 1.2e-113 412.9 266 74.8
Mapoly0218s0007 Marchantia polymorpha HOM04D005159 ORTHO04D006368 1.7e-112 409.1 350 60.6
Achn088881 Actinidia chinensis HOM04D005159 ORTHO04D006368 4.9e-99 364.4 339 58.4
Araip.N3W37 Arachis ipaensis HOM04D005159 ORTHO04D006368 1.3e-96 356.3 364 53.6
AUR62035520 Chenopodium quinoa HOM04D005159 ORTHO04D006368 3.3e-95 351.7 348 54.3
MDO.mRNA.g.3782.32 Malus domestica HOM04D005159 ORTHO04D006368 1.3e-94 349.7 352 54.0
Cre10.g421700 Chlamydomonas reinhardtii HOM04D005159 ORTHO04D006368 1.6e-94 349.4 349 52.7
Cre01.g053150 Chlamydomonas reinhardtii HOM04D005159 ORTHO04D006368 3.1e-85 318.5 359 48.2
Cre01.g053000 Chlamydomonas reinhardtii HOM04D005159 ORTHO04D006368 5.3e-85 317.8 359 48.5
ZJU.LOC107415218 Ziziphus jujuba HOM04D005159 ORTHO04D006368 2.6e-76 288.9 195 71.8
Cpa.g.c44855 Carica papaya HOM04D005159 ORTHO04D006368 7.5e-55 217.6 151 69.5
MDO.mRNA.g.513.31 Malus domestica HOM04D005159 ORTHO04D006368 1.2e-52 210.3 345 40.9
Cpa.g.sc1921.1 Carica papaya HOM04D005159 ORTHO04D006368 1.5e-39 166.8 126 65.9
C.cajan_36706.g Cajanus cajan HOM04D005159 ORTHO04D006368 5.6e-34 148.3 113 67.3
Tp4g23010 Schrenkiella parvula HOM04D006121 ORTHO04D007488 1.2e-31 140.6 340 30.3
Carubv10023204m.g Capsella rubella HOM04D006121 ORTHO04D007488 2.6e-31 139.4 340 30.0
AUR62024939 Chenopodium quinoa HOM04D006121 ORTHO04D007488 2.6e-31 139.4 352 28.7
ATR1127G100 Amborella trichopoda HOM04D006121 ORTHO04D007488 2.6e-31 139.4 339 30.7
AL4G38560 Arabidopsis lyrata HOM04D006121 ORTHO04D007488 4.4e-31 138.7 340 30.3
AT2G40690 Arabidopsis thaliana HOM04D006121 ORTHO04D007488 4.4e-31 138.7 340 30.0
Brara.D02480 Brassica rapa HOM04D006121 ORTHO04D007488 5.7e-31 138.3 340 30.3
Bo4g190360 Brassica oleracea HOM04D006121 ORTHO04D007488 5.7e-31 138.3 340 30.3
Potri.013G090900 Populus trichocarpa HOM04D006121 ORTHO04D007488 7.5e-31 137.9 340 29.7
GSVIVG01032665001 Vitis vinifera HOM04D000001 ORTHO04D007488 1.3e-30 137.1 340 29.7
Cc02_g05320 Coffea canephora HOM04D006121 ORTHO04D007488 1.1e-29 134.0 339 29.8
THA.LOC104813883 Tarenaya hassleriana HOM04D006121 ORTHO04D007488 1.4e-29 133.7 340 28.8
CAN.G24.1 Capsicum annuum HOM04D006121 ORTHO04D007488 1.8e-29 133.3 337 28.8
RCO.g.29729.000106 Ricinus communis HOM04D006121 ORTHO04D007488 4.1e-29 132.1 340 29.1
DCAR_018040 Daucus carota HOM04D006121 ORTHO04D007488 4.1e-29 132.1 339 29.5
MCO03G330 Micromonas commoda HOM04D006121 ORTHO04D007488 5.4e-29 131.7 347 29.4
Bv2_038910_zrkr Beta vulgaris HOM04D006121 ORTHO04D007488 9.2e-29 131.0 340 28.2
Cpa.g.sc19.51 Carica papaya HOM04D006121 ORTHO04D007488 9.2e-29 131.0 340 28.5
PGSC0003DMG400016644 Solanum tuberosum HOM04D006121 ORTHO04D007488 1.2e-28 130.6 337 27.9
Solyc06g048920.2 Solanum lycopersicum HOM04D006121 ORTHO04D007488 1.2e-28 130.6 337 27.9
Peaxi162Scf00739g00427 Petunia axillaris HOM04D006121 ORTHO04D007488 1.6e-28 130.2 336 28.6
COL.COLO4_10032 Corchorus olitorius HOM04D006121 ORTHO04D007488 2.7e-28 129.4 340 28.8
TCA.TCM_045473 Theobroma cacao HOM04D006121 ORTHO04D007488 2.7e-28 129.4 340 28.8
HBR0959G040 Hevea brasiliensis HOM04D006121 ORTHO04D007488 3.5e-28 129.0 340 29.1
Manes.07G142700 Manihot esculenta HOM04D006121 ORTHO04D007488 3.5e-28 129.0 340 29.1
Eucgr.G03143 Eucalyptus grandis HOM04D006121 ORTHO04D007488 4.6e-28 128.6 340 28.8
Glyma.02G218700 Glycine max HOM04D006121 ORTHO04D007488 7.8e-28 127.9 340 27.9
Ciclev10031473m.g Citrus clementina HOM04D006121 ORTHO04D007488 7.8e-28 127.9 340 27.9
TPR.G27028 Trifolium pratense HOM04D006121 ORTHO04D007488 1.3e-27 127.1 351 27.9
Mapoly0076s0092 Marchantia polymorpha HOM04D006121 ORTHO04D007488 1.7e-27 126.7 341 28.4
NNU_12206 Nelumbo nucifera HOM04D006121 ORTHO04D007488 3.9e-27 125.6 340 28.2
Prupe.2G264600 Prunus persica HOM04D006121 ORTHO04D007488 5.0e-27 125.2 340 28.5
Vradi0338s00010 Vigna radiata var. radiata HOM04D006121 ORTHO04D007488 6.6e-27 124.8 341 27.9
Medtr5g067640 Medicago truncatula HOM04D006121 ORTHO04D007488 1.5e-26 123.6 340 28.2
Achn062871 Actinidia chinensis HOM04D006121 ORTHO04D007488 4.3e-26 122.1 339 28.9
FVE21361 Fragaria vesca HOM04D006121 ORTHO04D007488 5.6e-26 121.7 340 28.2
Pp3c2_32750 Physcomitrium patens HOM04D006121 ORTHO04D007488 9.5e-26 120.9 340 26.2
Cucsa.143860 Cucumis sativus L. HOM04D006121 ORTHO04D007488 9.5e-26 120.9 292 29.5
Pp3c1_10090 Physcomitrium patens HOM04D006121 ORTHO04D007488 1.6e-25 120.2 340 25.9
Gorai.012G015200 Gossypium raimondii HOM04D006121 ORTHO04D007488 1.6e-25 120.2 340 27.9
Zm00001d019218 Zea mays HOM04D006121 ORTHO04D007488 1.6e-25 120.2 339 28.0
AUR62030605 Chenopodium quinoa HOM04D006121 ORTHO04D007488 3.6e-25 119.0 366 26.5
MELO3C020157 Cucumis melo HOM04D006121 ORTHO04D007488 5.2e-24 115.2 248 33.1
Pbr002917.2.g Pyrus bretschneideri HOM04D006121 ORTHO04D007488 2.0e-23 113.2 355 27.3
Migut.F00577 Erythranthe guttata HOM04D006121 ORTHO04D007488 1.3e-22 110.5 337 27.0
Cre12.g511150 Chlamydomonas reinhardtii HOM04D006121 ORTHO04D007488 1.6e-20 103.6 350 26.0
Cre09.g387763 Chlamydomonas reinhardtii HOM04D006121 ORTHO04D007488 3.0e-19 99.4 330 25.8
AH015621 Amaranthus hypochondriacus HOM04D006121 ORTHO04D007488 6.6e-19 98.2 345 25.2
Cla007303.g Citrullus lanatus HOM04D006121 ORTHO04D007488 5.6e-18 95.1 356 25.8
PAB00015239 Picea abies HOM04D006121 ORTHO04D007488 1.2e-17 94.0 247 28.7
Ca_21671.g Cicer arietinum HOM04D006121 ORTHO04D007488 2.1e-17 93.2 237 30.0
PAB00040870 Picea abies HOM04D006121 ORTHO04D007488 8.9e-16 87.8 166 32.5
Cpa.g.sc862.6 Carica papaya HOM04D005159 ORTHO04D006368 1.2e-15 87.4 62 64.5
C.cajan_05152.g Cajanus cajan HOM04D006121 ORTHO04D007488 1.5e-15 87.0 249 26.1
LOC_Os07g12640 Oryza sativa ssp. japonica HOM04D006121 ORTHO04D007488 9.9e-15 84.3 246 29.7
Medtr6g021910 Medicago truncatula HOM04D003867 ORTHO04D004851 1.4e-13 80.5 51 74.5
TPR.G21639 Trifolium pratense HOM04D003867 ORTHO04D004851 3.2e-13 79.3 48 77.1
ZJU.LOC107413989 Ziziphus jujuba HOM04D006121 ORTHO04D007488 2.3e-11 73.2 198 28.8
Araip.6C4D5 Arachis ipaensis HOM04D006121 ORTHO04D007488 8.9e-08 61.2 121 32.2

Actinidia chinensis (3 genes)
Amaranthus hypochondriacus (2 genes)
Amborella trichopoda (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis ipaensis (3 genes)
Beta vulgaris (2 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Cajanus cajan (3 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Carica papaya (4 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (5 genes)
Cicer arietinum (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (2 genes)
Coffea canephora (2 genes)
Corchorus olitorius (2 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (3 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (2 genes)
Fragaria vesca (2 genes)
Glycine max (4 genes)
Gossypium raimondii (3 genes)
Hevea brasiliensis (2 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (4 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (2 genes)
Petunia axillaris (2 genes)
Physcomitrium patens (3 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Prunus persica (2 genes)
Pyrus bretschneideri (4 genes)
Ricinus communis (2 genes)
Schrenkiella parvula (2 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (2 genes)
Solanum tuberosum (2 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (2 genes)
Trifolium pratense (4 genes)
Utricularia gibba (0 genes)
Vigna radiata var. radiata (3 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)
Ziziphus jujuba (3 genes)

Program Settings