Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Zm00001d041414	Zea mays	HOM04D004282	ORTHO04D006219	0.0e+00	1136.7	601	100.0
Zm00001d030990	Zea mays	HOM04D004282	ORTHO04D006219	6.7e-226	786.6	609	74.5
LOC_Os12g40860	Oryza sativa ssp. japonica	HOM04D004282	ORTHO04D006219	4.5e-206	720.7	601	67.2
LOC_Os03g43390	Oryza sativa ssp. japonica	HOM04D004282	ORTHO04D006219	2.4e-151	538.9	547	58.7
DCAR_018449	Daucus carota	HOM04D004282	ORTHO04D006219	5.1e-141	504.6	603	52.1
Gorai.001G243100	Gossypium raimondii	HOM04D004282	ORTHO04D006219	2.1e-139	499.2	608	51.2
HBR0410G040	Hevea brasiliensis	HOM04D004282	ORTHO04D006219	2.8e-139	498.8	597	51.9
Gorai.001G243000	Gossypium raimondii	HOM04D004282	ORTHO04D006219	1.1e-138	496.9	619	48.5
Cpa.g.sc52.91	Carica papaya	HOM04D004282	ORTHO04D006219	1.1e-138	496.9	618	51.1
Zm00001d033321	Zea mays	HOM04D004282	ORTHO04D006219	8.9e-138	493.8	579	51.1
HBR0994G002	Hevea brasiliensis	HOM04D004282	ORTHO04D006219	1.5e-137	493.0	598	51.7
TCA.TCM_004210	Theobroma cacao	HOM04D004282	ORTHO04D006219	3.4e-137	491.9	586	52.6
NNU_19922	Nelumbo nucifera	HOM04D004282	ORTHO04D006219	1.1e-135	486.9	621	50.1
Manes.01G201500	Manihot esculenta	HOM04D004282	ORTHO04D006219	1.1e-135	486.9	597	50.9
ZJU.LOC107425898	Ziziphus jujuba	HOM04D004282	ORTHO04D006219	1.4e-135	486.5	614	51.1
Potri.002G044800	Populus trichocarpa	HOM04D004282	ORTHO04D006219	2.4e-135	485.7	598	50.3
RCO.g.29883.000050	Ricinus communis	HOM04D004282	ORTHO04D006219	1.7e-133	479.6	597	50.6
Glyma.19G161300	Glycine max	HOM04D004282	ORTHO04D006219	5.1e-133	478.0	591	49.7
TPR.G35731	Trifolium pratense	HOM04D004282	ORTHO04D006219	6.6e-133	477.6	622	50.3
Ca_07787.g	Cicer arietinum	HOM04D004282	ORTHO04D006219	3.3e-132	475.3	599	50.9
Potri.005G218400	Populus trichocarpa	HOM04D004282	ORTHO04D006219	4.3e-132	474.9	597	48.2
GSVIVG01000724001	Vitis vinifera	HOM04D004282	ORTHO04D006219	4.3e-132	474.9	600	50.3
PGSC0003DMG400019300	Solanum tuberosum	HOM04D004282	ORTHO04D006219	5.6e-132	474.6	620	47.1
Vradi08g08910	Vigna radiata var. radiata	HOM04D004282	ORTHO04D006219	9.6e-132	473.8	610	46.4
Solyc09g065880.2	Solanum lycopersicum	HOM04D004282	ORTHO04D006219	9.6e-132	473.8	620	47.3
Vradi03g01260	Vigna radiata var. radiata	HOM04D004282	ORTHO04D006219	1.6e-131	473.0	610	45.6
Prupe.8G232000	Prunus persica	HOM04D004282	ORTHO04D006219	1.8e-130	469.5	606	50.0
MELO3C015764	Cucumis melo	HOM04D004282	ORTHO04D006219	2.4e-130	469.2	575	49.4
Cucsa.388740	Cucumis sativus L.	HOM04D004282	ORTHO04D006219	3.1e-130	468.8	574	49.1
Solyc06g084060.2	Solanum lycopersicum	HOM04D004282	ORTHO04D006219	1.5e-129	466.5	604	47.4
Cc01_g18840	Coffea canephora	HOM04D004282	ORTHO04D006219	1.5e-129	466.5	595	46.2
Ciclev10019274m.g	Citrus clementina	HOM04D004282	ORTHO04D006219	3.4e-129	465.3	584	50.7
Araip.7G8YS	Arachis ipaensis	HOM04D004282	ORTHO04D006219	9.9e-129	463.8	578	49.8
C.cajan_28385.g	Cajanus cajan	HOM04D004282	ORTHO04D006219	1.7e-128	463.0	585	47.7
Glyma.03G158900	Glycine max	HOM04D004282	ORTHO04D006219	2.2e-128	462.6	580	50.3
Glyma.02G142300	Glycine max	HOM04D004282	ORTHO04D006219	4.9e-128	461.5	610	49.2
Glyma.10G032000	Glycine max	HOM04D004282	ORTHO04D006219	4.9e-128	461.5	612	48.7
Cla014810.g	Citrullus lanatus	HOM04D004282	ORTHO04D006219	6.4e-128	461.1	578	51.2
THA.LOC104824390	Tarenaya hassleriana	HOM04D004282	ORTHO04D006219	8.4e-128	460.7	597	50.3
AH017772	Amaranthus hypochondriacus	HOM04D004282	ORTHO04D006219	1.1e-127	460.3	582	49.8
CAN.G1259.1	Capsicum annuum	HOM04D004282	ORTHO04D006219	1.1e-127	460.3	596	49.2
Pbr009068.1.g	Pyrus bretschneideri	HOM04D004282	ORTHO04D006219	1.1e-127	460.3	601	47.1
PGSC0003DMG400020140	Solanum tuberosum	HOM04D004282	ORTHO04D006219	3.5e-126	455.3	615	46.8
THA.LOC104804696	Tarenaya hassleriana	HOM04D004282	ORTHO04D006219	4.6e-126	454.9	601	45.4
Eucgr.B01491	Eucalyptus grandis	HOM04D004282	ORTHO04D006219	7.9e-126	454.1	623	46.9
ATR0665G431	Amborella trichopoda	HOM04D004282	ORTHO04D006219	7.9e-126	454.1	597	46.6
AL5G35730	Arabidopsis lyrata	HOM04D004282	ORTHO04D006219	1.8e-125	453.0	610	45.7
Peaxi162Scf00049g00208	Petunia axillaris	HOM04D004282	ORTHO04D006219	5.1e-125	451.4	625	47.2
Medtr1g070515	Medicago truncatula	HOM04D004282	ORTHO04D006219	5.1e-125	451.4	600	49.0
FVE08195	Fragaria vesca	HOM04D004282	ORTHO04D006219	6.7e-125	451.1	597	49.4
AT3G54650	Arabidopsis thaliana	HOM04D004282	ORTHO04D006219	2.5e-124	449.1	610	45.4
Carubv10016893m.g	Capsella rubella	HOM04D004282	ORTHO04D006219	7.4e-124	447.6	611	45.5
Pbr025292.1.g	Pyrus bretschneideri	HOM04D004282	ORTHO04D006219	4.8e-123	444.9	588	45.2
Peaxi162Scf01311g00024	Petunia axillaris	HOM04D004282	ORTHO04D006219	1.1e-122	443.7	579	48.9
Tp5g07800	Schrenkiella parvula	HOM04D004282	ORTHO04D006219	3.1e-122	442.2	608	48.2
AUR62032255	Chenopodium quinoa	HOM04D004282	ORTHO04D006219	2.0e-121	439.5	483	55.5
Bo8g084810	Brassica oleracea	HOM04D004282	ORTHO04D006219	2.6e-121	439.1	595	45.0
Brara.I03722	Brassica rapa	HOM04D004282	ORTHO04D006219	5.8e-121	438.0	587	48.4
Bv5_120340_ugnh	Beta vulgaris	HOM04D004282	ORTHO04D006219	7.6e-121	437.6	610	46.9
Brara.D00453	Brassica rapa	HOM04D004282	ORTHO04D006219	9.9e-121	437.2	589	48.9
Migut.D00375	Erythranthe guttata	HOM04D004282	ORTHO04D006219	3.8e-120	435.3	610	44.4
Araip.A0DQ6	Arachis ipaensis	HOM04D004282	ORTHO04D006219	3.5e-118	428.7	620	46.1
UGI.Scf00079.6834	Utricularia gibba	HOM04D004282	ORTHO04D006219	2.2e-112	409.5	605	44.0
NNU_14286	Nelumbo nucifera	HOM04D004282	ORTHO04D006219	2.1e-110	402.9	596	43.5
Bo4g119800	Brassica oleracea	HOM04D004282	ORTHO04D006219	2.5e-103	379.4	440	52.7
AUR62011940	Chenopodium quinoa	HOM04D004282	ORTHO04D006219	3.6e-102	375.6	403	56.6
PAB00061532	Picea abies	HOM04D004282	ORTHO04D006219	1.1e-87	327.4	480	39.8
Achn191911	Actinidia chinensis	HOM04D004282	ORTHO04D006219	1.5e-84	317.0	337	56.4
COL.COLO4_06074	Corchorus olitorius	HOM04D004282	ORTHO04D006219	1.9e-55	220.3	366	40.2
Achn321441	Actinidia chinensis	HOM04D004282	ORTHO04D006219	1.2e-52	211.1	583	32.4
MDO.mRNA.g.1034.18	Malus domestica	HOM04D004282	ORTHO04D006219	1.4e-29	134.4	192	43.8
Araip.VZ2HX	Arachis ipaensis	HOM04D000210	ORTHO04D000521	6.2e-22	109.0	136	50.0
Araip.QQ6TH	Arachis ipaensis	HOM04D004282	ORTHO04D006219	2.9e-19	100.1	81	63.0
Araip.KX5KF	Arachis ipaensis	HOM04D004282	ORTHO04D006219	1.1e-18	98.2	114	51.8
MDO.mRNA.g.5514.3	Malus domestica	HOM04D004282	ORTHO04D027701	7.1e-10	68.9	113	38.1
AUR62027361	Chenopodium quinoa	HOM04D004282	ORTHO04D097736	1.3e-08	64.7	102	37.3
AUR62026403	Chenopodium quinoa	HOM04D009810	ORTHO04D008741	2.1e-06	57.4	90	41.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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