Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Zm00001d018112	Zea mays	HOM04D001236	ORTHO04D014378	1.7e-51	204.9	121	100.0
LOC_Os02g52140	Oryza sativa ssp. japonica	HOM04D001236	ORTHO04D001303	6.6e-32	139.8	97	80.4
Zm00001d052198	Zea mays	HOM04D001236	ORTHO04D001303	4.7e-30	133.7	99	85.9
LOC_Os06g11620	Oryza sativa ssp. japonica	HOM04D001236	ORTHO04D001303	6.2e-22	106.7	93	76.3
Zm00001d037200	Zea mays	HOM04D001236	ORTHO04D001303	4.2e-18	94.0	93	71.0
Zm00001d044869	Zea mays	HOM04D001236	ORTHO04D001303	1.9e-15	85.1	93	68.8
Bo00615s150	Brassica oleracea	HOM04D001236	ORTHO04D001303	3.3e-15	84.3	95	57.9
Brara.B03945	Brassica rapa	HOM04D001236	ORTHO04D001303	9.6e-15	82.8	95	55.8
AT5G10350	Arabidopsis thaliana	HOM04D001236	ORTHO04D001303	6.2e-14	80.1	98	56.1
AL6G20840	Arabidopsis lyrata	HOM04D001236	ORTHO04D001303	9.0e-13	76.3	98	54.1
Carubv10027046m.g	Capsella rubella	HOM04D001236	ORTHO04D001303	2.0e-12	75.1	101	56.4
Ca_09547.g	Cicer arietinum	HOM04D001236	ORTHO04D001303	4.5e-12	73.9	101	49.5
ATR0665G544	Amborella trichopoda	HOM04D001236	ORTHO04D001303	5.8e-12	73.6	87	55.2
ZJU.LOC107414134	Ziziphus jujuba	HOM04D001236	ORTHO04D001303	9.9e-12	72.8	100	49.0
Araip.R65TJ	Arachis ipaensis	HOM04D001236	ORTHO04D001303	1.7e-11	72.0	98	61.2
Achn171381	Actinidia chinensis	HOM04D001236	ORTHO04D012401	3.8e-11	70.9	92	52.2
C.cajan_27790.g	Cajanus cajan	HOM04D001236	ORTHO04D014378	4.9e-11	70.5	96	61.5
FVE21415	Fragaria vesca	HOM04D001236	ORTHO04D001303	6.4e-11	70.1	102	52.0
Glyma.05G176400	Glycine max	HOM04D001236	ORTHO04D001303	1.1e-10	69.3	96	60.4
HBR2020G029	Hevea brasiliensis	HOM04D001236	ORTHO04D001303	1.4e-10	68.9	100	46.0
MELO3C017625	Cucumis melo	HOM04D001236	ORTHO04D001303	1.9e-10	68.6	105	45.7
Achn140321	Actinidia chinensis	HOM04D001236	ORTHO04D001303	2.4e-10	68.2	94	46.8
Cla010692.g	Citrullus lanatus	HOM04D001236	ORTHO04D001303	2.4e-10	68.2	105	43.8
Manes.06G129500	Manihot esculenta	HOM04D001236	ORTHO04D001303	3.2e-10	67.8	99	43.4
PGSC0003DMG400016798	Solanum tuberosum	HOM04D001236	ORTHO04D001303	3.2e-10	67.8	96	47.9
C.cajan_19418.g	Cajanus cajan	HOM04D005927	ORTHO04D007587	4.2e-10	67.4	112	46.4
MDO.mRNA.g.1787.6	Malus domestica	HOM04D001236	ORTHO04D001303	5.4e-10	67.0	105	45.7
Pbr002866.1.g	Pyrus bretschneideri	HOM04D001236	ORTHO04D001303	5.4e-10	67.0	103	45.6
Pbr001378.2.g	Pyrus bretschneideri	HOM04D001236	ORTHO04D001303	7.1e-10	66.6	105	45.7
THA.LOC104814766	Tarenaya hassleriana	HOM04D001236	ORTHO04D014378	1.2e-09	65.9	113	53.1
DCAR_014648	Daucus carota	HOM04D001236	ORTHO04D001303	1.6e-09	65.5	96	44.8
COL.COLO4_37303	Corchorus olitorius	HOM04D001236	ORTHO04D001303	2.1e-09	65.1	108	41.7
MDO.mRNA.g.64.3	Malus domestica	HOM04D001236	ORTHO04D001303	2.1e-09	65.1	104	46.2
Vradi07g18720	Vigna radiata var. radiata	HOM04D001236	ORTHO04D001303	2.7e-09	64.7	96	58.3
TPR.G18549	Trifolium pratense	HOM04D001236	ORTHO04D001303	4.6e-09	63.9	102	47.1
Gorai.008G213100	Gossypium raimondii	HOM04D001236	ORTHO04D001303	4.6e-09	63.9	108	44.4
Potri.015G110800	Populus trichocarpa	HOM04D001236	ORTHO04D001303	6.0e-09	63.5	94	45.7
Medtr8g089990	Medicago truncatula	HOM04D001236	ORTHO04D001303	6.0e-09	63.5	96	58.3
Pp3c21_17360	Physcomitrium patens	HOM04D001236	ORTHO04D001303	1.0e-08	62.8	104	48.1
Medtr1g073000	Medicago truncatula	HOM04D001236	ORTHO04D001303	1.0e-08	62.8	102	47.1
Gorai.003G110600	Gossypium raimondii	HOM04D001236	ORTHO04D001303	1.0e-08	62.8	106	42.5
Eucgr.A02940	Eucalyptus grandis	HOM04D001236	ORTHO04D001303	1.3e-08	62.4	113	42.5
GSVIVG01024485001	Vitis vinifera	HOM04D001236	ORTHO04D001303	1.3e-08	62.4	118	39.8
Potri.012G115100	Populus trichocarpa	HOM04D001236	ORTHO04D001303	1.3e-08	62.4	93	45.2
Carubv10001786m.g	Capsella rubella	HOM04D001236	ORTHO04D001303	1.3e-08	62.4	92	60.9
Manes.S051200	Manihot esculenta	HOM04D001236	ORTHO04D001303	1.3e-08	62.4	77	53.2
Vradi08g15480	Vigna radiata var. radiata	HOM04D001236	ORTHO04D001303	1.3e-08	62.4	102	48.0
SMO141G0172	Selaginella moellendorffii	HOM04D001236	ORTHO04D001303	1.8e-08	62.0	93	46.2
Tp6g13310	Schrenkiella parvula	HOM04D001236	ORTHO04D001303	2.3e-08	61.6	106	41.5
Glyma.10G191400	Glycine max	HOM04D001236	ORTHO04D001303	3.0e-08	61.2	101	41.6
NNU_00331	Nelumbo nucifera	HOM04D001236	ORTHO04D001303	3.9e-08	60.8	90	44.4
Glyma.20G198900	Glycine max	HOM04D001236	ORTHO04D001303	3.9e-08	60.8	101	41.6
Pp3c18_12120	Physcomitrium patens	HOM04D001236	ORTHO04D001303	5.1e-08	60.5	103	47.6
Pp3c18_12110	Physcomitrium patens	HOM04D001236	ORTHO04D001303	5.1e-08	60.5	103	47.6
THA.LOC104811544	Tarenaya hassleriana	HOM04D001236	ORTHO04D001303	6.7e-08	60.1	108	39.8
Gorai.001G052500	Gossypium raimondii	HOM04D001236	ORTHO04D001303	8.7e-08	59.7	105	41.0
Bo3g023850	Brassica oleracea	HOM04D001236	ORTHO04D005608	1.1e-07	59.3	105	41.0
Bo9g099000	Brassica oleracea	HOM04D001236	ORTHO04D001303	1.1e-07	59.3	107	40.2
Ca_07867.g	Cicer arietinum	HOM04D001236	ORTHO04D001303	1.1e-07	59.3	96	40.6
Brara.C01491	Brassica rapa	HOM04D001236	ORTHO04D001303	1.1e-07	59.3	105	41.0
UGI.Scf00464.16254	Utricularia gibba	HOM04D001236	ORTHO04D001303	1.5e-07	58.9	98	45.9
C.cajan_22498.g	Cajanus cajan	HOM04D001236	ORTHO04D001303	1.5e-07	58.9	132	43.9
Brara.J00606	Brassica rapa	HOM04D001236	ORTHO04D001303	1.5e-07	58.9	107	40.2
Cucsa.093920	Cucumis sativus L.	HOM04D001236	ORTHO04D001303	1.5e-07	58.9	99	42.4
Prupe.2G269600	Prunus persica	HOM04D001236	ORTHO04D001303	1.9e-07	58.5	101	41.6
Potri.017G051600	Populus trichocarpa	HOM04D001236	ORTHO04D001303	1.9e-07	58.5	79	51.9
Carubv10027069m.g	Capsella rubella	HOM04D001236	ORTHO04D001303	2.5e-07	58.2	106	40.6
Migut.F00545	Erythranthe guttata	HOM04D001236	ORTHO04D001303	3.3e-07	57.8	98	43.9
NNU_08597	Nelumbo nucifera	HOM04D001236	ORTHO04D014378	3.3e-07	57.8	73	67.1
Manes.13G095800	Manihot esculenta	HOM04D001236	ORTHO04D001303	7.4e-07	56.6	99	56.6
HBR0482G007	Hevea brasiliensis	HOM04D001236	ORTHO04D001303	7.4e-07	56.6	90	56.7
Manes.07G034000	Manihot esculenta	HOM04D001236	ORTHO04D001303	7.4e-07	56.6	77	63.6
Bv5_102520_zhad	Beta vulgaris	HOM04D001236	ORTHO04D001303	3.6e-06	54.3	94	42.6
AUR62030430	Chenopodium quinoa	HOM04D001236	ORTHO04D001303	6.2e-06	53.5	95	42.1
Gorai.013G060100	Gossypium raimondii	HOM04D001236	ORTHO04D001303	8.1e-06	53.1	79	46.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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