Interactive Phylogenetics Module

Gene Id
Zm00001d011092

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d011092 Zea mays HOM04D004720 ORTHO04D005839 5.5e-63 243.0 120 100.0
LOC_Os05g01710 Oryza sativa ssp. japonica HOM04D004720 ORTHO04D005839 3.8e-48 193.7 120 83.3
MELO3C008106 Cucumis melo HOM04D004720 ORTHO04D005839 1.6e-46 188.3 120 80.0
Cucsa.088430 Cucumis sativus L. HOM04D004720 ORTHO04D005839 2.7e-46 187.6 120 80.0
ATR0691G175 Amborella trichopoda HOM04D004720 ORTHO04D005839 3.6e-46 187.2 120 81.7
Cpa.g.sc21.43 Carica papaya HOM04D004720 ORTHO04D005839 8.0e-46 186.0 120 80.0
GSVIVG01009213001 Vitis vinifera HOM04D004720 ORTHO04D005839 1.8e-45 184.9 120 80.0
Eucgr.F00436 Eucalyptus grandis HOM04D004720 ORTHO04D005839 3.0e-45 184.1 120 80.0
MELO3C008105 Cucumis melo HOM04D004720 ORTHO04D005839 4.0e-45 183.7 120 78.3
NNU_12908 Nelumbo nucifera HOM04D004720 ORTHO04D005839 5.2e-45 183.3 120 79.2
Achn126161 Actinidia chinensis HOM04D004720 ORTHO04D005839 5.2e-45 183.3 120 80.0
TCA.TCM_034542 Theobroma cacao HOM04D004720 ORTHO04D005839 8.8e-45 182.6 120 79.2
FVE26577 Fragaria vesca HOM04D004720 ORTHO04D005839 8.8e-45 182.6 120 78.3
HBR2437G042 Hevea brasiliensis HOM04D004720 ORTHO04D005839 1.2e-44 182.2 120 78.3
HBR0453G008 Hevea brasiliensis HOM04D004720 ORTHO04D005839 1.5e-44 181.8 120 78.3
Glyma.02G216100 Glycine max HOM04D004720 ORTHO04D005839 1.5e-44 181.8 120 78.3
Prupe.1G536300 Prunus persica HOM04D004720 ORTHO04D005839 2.0e-44 181.4 120 78.3
NNU_05220 Nelumbo nucifera HOM04D004720 ORTHO04D005839 2.0e-44 181.4 120 77.5
COL.COLO4_35286 Corchorus olitorius HOM04D004720 ORTHO04D005839 2.0e-44 181.4 120 78.3
Medtr7g005540 Medicago truncatula HOM04D004720 ORTHO04D005839 3.3e-44 180.6 120 77.5
RCO.g.29596.000023 Ricinus communis HOM04D004720 ORTHO04D005839 4.4e-44 180.3 120 77.5
Manes.18G057000 Manihot esculenta HOM04D004720 ORTHO04D005839 4.4e-44 180.3 120 77.5
LOC_Os01g73890 Oryza sativa ssp. japonica HOM04D004720 ORTHO04D005839 4.4e-44 180.3 117 79.5
ZJU.LOC107421332 Ziziphus jujuba HOM04D004720 ORTHO04D005839 4.4e-44 180.3 120 78.3
Gorai.009G278800 Gossypium raimondii HOM04D004720 ORTHO04D005839 5.7e-44 179.9 120 77.5
DCAR_006444 Daucus carota HOM04D004720 ORTHO04D005839 5.7e-44 179.9 120 77.5
Gorai.009G228000 Gossypium raimondii HOM04D004720 ORTHO04D005839 5.7e-44 179.9 120 78.3
Bv9_209360_kxoh Beta vulgaris HOM04D004720 ORTHO04D005839 5.7e-44 179.9 120 78.3
Achn222601 Actinidia chinensis HOM04D004720 ORTHO04D005839 7.5e-44 179.5 137 70.8
C.cajan_04776.g Cajanus cajan HOM04D004720 ORTHO04D005839 7.5e-44 179.5 120 77.5
Ciclev10002917m.g Citrus clementina HOM04D004720 ORTHO04D005839 7.5e-44 179.5 120 77.5
Glyma.14G183100 Glycine max HOM04D004720 ORTHO04D005839 1.3e-43 178.7 120 77.5
Potri.005G151700 Populus trichocarpa HOM04D004720 ORTHO04D005839 2.8e-43 177.6 120 75.8
TPR.G15622 Trifolium pratense HOM04D004720 ORTHO04D005839 2.8e-43 177.6 117 77.8
Cc10_g08370 Coffea canephora HOM04D004720 ORTHO04D005839 4.8e-43 176.8 120 76.7
PGSC0003DMG400002052 Solanum tuberosum HOM04D004720 ORTHO04D005839 6.3e-43 176.4 120 77.5
Peaxi162Scf00160g00913 Petunia axillaris HOM04D004720 ORTHO04D005839 8.2e-43 176.0 120 76.7
Solyc12g088030.1 Solanum lycopersicum HOM04D004720 ORTHO04D005839 8.2e-43 176.0 120 77.5
CAN.G1104.8 Capsicum annuum HOM04D004720 ORTHO04D005839 8.2e-43 176.0 120 77.5
Bv8_182920_hcmi Beta vulgaris HOM04D004720 ORTHO04D005839 1.1e-42 175.6 120 75.8
Brara.K01502 Brassica rapa HOM04D004720 ORTHO04D005839 1.1e-42 175.6 120 75.8
Bo1g038970 Brassica oleracea HOM04D004720 ORTHO04D005839 1.4e-42 175.3 120 75.0
Brara.A01449 Brassica rapa HOM04D004720 ORTHO04D005839 1.4e-42 175.3 120 75.0
Carubv10006082m.g Capsella rubella HOM04D004720 ORTHO04D005839 2.4e-42 174.5 120 75.0
Tp7g22400 Schrenkiella parvula HOM04D004720 ORTHO04D005839 5.3e-42 173.3 120 74.2
Zm00001d041969 Zea mays HOM04D004720 ORTHO04D005839 5.3e-42 173.3 117 76.1
AL7G28780 Arabidopsis lyrata HOM04D004720 ORTHO04D005839 5.3e-42 173.3 120 74.2
AT4G24440 Arabidopsis thaliana HOM04D004720 ORTHO04D005839 5.3e-42 173.3 120 74.2
Araip.KZ8MV Arachis ipaensis HOM04D004720 ORTHO04D005839 9.1e-42 172.6 120 74.2
THA.LOC104815469 Tarenaya hassleriana HOM04D004720 ORTHO04D005839 9.1e-42 172.6 120 74.2
AH000296 Amaranthus hypochondriacus HOM04D004720 ORTHO04D005839 9.1e-42 172.6 120 75.0
THA.LOC104799853 Tarenaya hassleriana HOM04D004720 ORTHO04D005839 1.2e-41 172.2 120 75.0
Brara.H01608 Brassica rapa HOM04D004720 ORTHO04D005839 1.6e-41 171.8 120 74.2
Bo8g050310 Brassica oleracea HOM04D004720 ORTHO04D005839 1.6e-41 171.8 120 74.2
TPR.G38776 Trifolium pratense HOM04D004720 ORTHO04D005839 2.2e-40 167.9 120 72.5
Medtr5g066740 Medicago truncatula HOM04D004720 ORTHO04D005839 2.9e-40 167.5 120 69.2
Migut.N01147 Erythranthe guttata HOM04D004720 ORTHO04D005839 5.0e-40 166.8 120 71.7
Bo7g109530 Brassica oleracea HOM04D004720 ORTHO04D005839 8.8e-37 156.0 120 70.0
AUR62017035 Chenopodium quinoa HOM04D004720 ORTHO04D005839 1.7e-35 151.8 107 74.8
HBR2263G013 Hevea brasiliensis HOM04D004720 ORTHO04D005839 8.3e-35 149.4 117 66.7
UGI.Scf00031.3644 Utricularia gibba HOM04D004720 ORTHO04D005839 5.9e-33 143.3 107 69.2
Mapoly0012s0108 Marchantia polymorpha HOM04D004720 ORTHO04D005839 2.9e-32 141.0 120 57.5
Pp3c15_13540 Physcomitrium patens HOM04D004720 ORTHO04D005839 7.2e-31 136.3 120 55.8
Pp3c9_10830 Physcomitrium patens HOM04D004720 ORTHO04D005839 1.2e-30 135.6 120 55.8
SMO169G0007 Selaginella moellendorffii HOM04D004720 ORTHO04D005839 2.0e-28 128.3 119 51.3
Araip.N3QJQ Arachis ipaensis HOM04D004720 ORTHO04D005839 5.9e-25 116.7 89 70.8
Cla023070.g Citrullus lanatus HOM04D004720 ORTHO04D005839 2.5e-23 111.3 60 93.3
Ca_12267.g Cicer arietinum HOM04D004720 ORTHO04D005839 3.3e-23 110.9 61 91.8
Vradi0180s00060 Vigna radiata var. radiata HOM04D004720 ORTHO04D005839 4.3e-23 110.5 61 90.2
AH001372 Amaranthus hypochondriacus HOM04D004720 ORTHO04D005839 1.6e-22 108.6 60 90.0
Migut.B00439 Erythranthe guttata HOM04D004720 ORTHO04D005839 4.7e-22 107.1 120 50.0
AUR62014838 Chenopodium quinoa HOM04D004720 ORTHO04D005839 4.3e-15 84.0 76 60.5
Mapoly0067s0078 Marchantia polymorpha HOM04D004720 ORTHO04D005839 9.5e-15 82.8 111 41.4
Bo6g027810 Brassica oleracea HOM04D004720 ORTHO04D005839 1.4e-13 79.0 104 48.1
Cre10.g424150 Chlamydomonas reinhardtii HOM04D004720 ORTHO04D005839 6.4e-11 70.1 113 32.7
UGI.Scf00078.6773 Utricularia gibba HOM04D004720 ORTHO04D005839 9.5e-07 56.2 49 55.1

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (2 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (2 genes)
Beta vulgaris (2 genes)
Brassica oleracea (4 genes)
Brassica rapa (3 genes)
Cajanus cajan (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (3 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Oryza sativa ssp. japonica (2 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (0 genes)
Populus trichocarpa (1 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (0 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Utricularia gibba (2 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)
Ziziphus jujuba (1 genes)

Program Settings