Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Zm00001d007086	Zea mays	HOM04D005442	ORTHO04D007586	3.9e-31	136.3	64	100.0
LOC_Os07g46555	Oryza sativa ssp. japonica	HOM04D005442	ORTHO04D007586	1.3e-18	94.7	62	72.6
Eucgr.G03245	Eucalyptus grandis	HOM04D005442	ORTHO04D007586	2.1e-16	87.4	61	65.6
GSVIVG01000659001	Vitis vinifera	HOM04D005442	ORTHO04D007586	7.8e-16	85.5	61	63.9
Achn101551	Actinidia chinensis	HOM04D005442	ORTHO04D007586	1.0e-15	85.1	62	61.3
Medtr3g017610	Medicago truncatula	HOM04D005442	ORTHO04D007586	1.3e-15	84.7	61	62.3
Potri.T153900	Populus trichocarpa	HOM04D005442	ORTHO04D007586	1.7e-15	84.3	61	62.3
Potri.001G025600	Populus trichocarpa	HOM04D005442	ORTHO04D007586	1.7e-15	84.3	61	62.3
RCO.g.30131.000364	Ricinus communis	HOM04D005442	ORTHO04D007586	1.7e-15	84.3	61	60.7
Cc02_g29700	Coffea canephora	HOM04D005442	ORTHO04D007586	3.9e-15	83.2	61	59.0
ZJU.LOC107412777	Ziziphus jujuba	HOM04D005442	ORTHO04D007586	8.6e-15	82.0	61	59.0
Manes.11G004000	Manihot esculenta	HOM04D005442	ORTHO04D007586	8.6e-15	82.0	61	60.7
HBR2965G077	Hevea brasiliensis	HOM04D005442	ORTHO04D007586	1.1e-14	81.6	61	60.7
THA.LOC104824190	Tarenaya hassleriana	HOM04D005442	ORTHO04D007586	1.9e-14	80.9	61	59.0
COL.COLO4_21458	Corchorus olitorius	HOM04D005442	ORTHO04D007586	1.9e-14	80.9	61	59.0
Cpa.g.sc223.13	Carica papaya	HOM04D005442	ORTHO04D007586	2.5e-14	80.5	61	60.7
Glyma.11G154400	Glycine max	HOM04D005442	ORTHO04D007586	3.3e-14	80.1	61	59.0
Solyc11g005590.1	Solanum lycopersicum	HOM04D005442	ORTHO04D007586	3.3e-14	80.1	61	60.7
DCAR_031830	Daucus carota	HOM04D005442	ORTHO04D007586	7.3e-14	79.0	59	57.6
FVE14329	Fragaria vesca	HOM04D005442	ORTHO04D007586	7.3e-14	79.0	62	54.8
Migut.O00720	Erythranthe guttata	HOM04D005442	ORTHO04D007586	7.3e-14	79.0	61	59.0
Migut.N01830	Erythranthe guttata	HOM04D005442	ORTHO04D007586	7.3e-14	79.0	61	59.0
Peaxi162Scf01732g00026	Petunia axillaris	HOM04D005442	ORTHO04D007586	1.2e-13	78.2	61	59.0
PGSC0003DMG401003979	Solanum tuberosum	HOM04D005442	ORTHO04D007586	1.6e-13	77.8	61	59.0
CAN.G476.5	Capsicum annuum	HOM04D005442	ORTHO04D007586	2.8e-13	77.0	60	60.0
C.cajan_34977.g	Cajanus cajan	HOM04D005442	ORTHO04D007586	4.7e-13	76.3	62	59.7
AH015695	Amaranthus hypochondriacus	HOM04D005442	ORTHO04D007586	6.2e-13	75.9	61	54.1
Ciclev10005678m.g	Citrus clementina	HOM04D005442	ORTHO04D007586	6.2e-13	75.9	61	55.7
AL5G35530	Arabidopsis lyrata	HOM04D005442	ORTHO04D007586	6.2e-13	75.9	61	52.5
Prupe.2G032200	Prunus persica	HOM04D005442	ORTHO04D007586	1.1e-12	75.1	61	55.7
Cla009944.g	Citrullus lanatus	HOM04D005442	ORTHO04D007586	1.1e-12	75.1	61	54.1
MDO.mRNA.g.215.7	Malus domestica	HOM04D005442	ORTHO04D007586	1.4e-12	74.7	62	54.8
Bv2_041360_ykue	Beta vulgaris	HOM04D005442	ORTHO04D007586	1.4e-12	74.7	61	54.1
Cucsa.308050	Cucumis sativus L.	HOM04D005442	ORTHO04D007586	1.8e-12	74.3	59	55.9
Brara.D00464	Brassica rapa	HOM04D005442	ORTHO04D007586	1.8e-12	74.3	61	52.5
MELO3C012462	Cucumis melo	HOM04D005442	ORTHO04D007586	1.8e-12	74.3	59	55.9
Carubv10018930m.g	Capsella rubella	HOM04D005442	ORTHO04D007586	2.4e-12	73.9	61	50.8
AUR62026845	Chenopodium quinoa	HOM04D005442	ORTHO04D007586	2.4e-12	73.9	61	55.7
Pbr022988.1.g	Pyrus bretschneideri	HOM04D005442	ORTHO04D007586	3.1e-12	73.6	62	53.2
Bo8g083700	Brassica oleracea	HOM04D005442	ORTHO04D007586	8.9e-12	72.0	60	53.3
UGI.Scf01237.20488	Utricularia gibba	HOM04D005442	ORTHO04D007586	1.2e-11	71.6	61	50.8
AT3G54480	Arabidopsis thaliana	HOM04D005442	ORTHO04D007586	1.2e-11	71.6	61	49.2
ATR0075G002	Amborella trichopoda	HOM04D005442	ORTHO04D007586	1.2e-11	71.6	62	53.2
Brara.I03711	Brassica rapa	HOM04D005442	ORTHO04D007586	2.0e-11	70.9	60	51.7
TPR.G17810	Trifolium pratense	HOM04D005442	ORTHO04D007586	9.9e-11	68.6	75	45.3
Gorai.012G017000	Gossypium raimondii	HOM04D005442	ORTHO04D007586	1.3e-10	68.2	88	43.2
Zm00001d022400	Zea mays	HOM04D005442	ORTHO04D007586	2.9e-10	67.0	44	72.7
Araip.XNS39	Arachis ipaensis	HOM04D005442	ORTHO04D007586	3.8e-10	66.6	78	44.9
Pp3c5_2560	Physcomitrium patens	HOM04D005442	ORTHO04D007586	1.6e-08	61.2	60	46.7
TCA.TCM_045324	Theobroma cacao	HOM04D005442	ORTHO04D007586	6.6e-07	55.8	65	44.6
PAB00033273	Picea abies	HOM04D005442	ORTHO04D007586	1.5e-06	54.7	39	56.4

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment