Interactive Phylogenetics Module

Gene Id
Zm00001d005846

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d005846 Zea mays HOM04D004512 ORTHO04D005540 8.6e-252 872.1 429 100.0
LOC_Os09g28120 Oryza sativa ssp. japonica HOM04D004512 ORTHO04D005540 2.6e-195 684.5 404 82.7
LOC_Os08g36570 Oryza sativa ssp. japonica HOM04D004512 ORTHO04D005540 3.6e-165 584.3 404 71.0
Zm00001d050000 Zea mays HOM04D004512 ORTHO04D005540 1.3e-162 575.9 407 69.0
Zm00001d031766 Zea mays HOM04D004512 ORTHO04D005540 6.6e-159 563.5 410 68.5
NNU_19504 Nelumbo nucifera HOM04D004512 ORTHO04D005540 1.0e-135 486.5 405 59.3
Eucgr.I02722 Eucalyptus grandis HOM04D004512 ORTHO04D005540 3.1e-132 474.9 407 57.7
ATR0193G009 Amborella trichopoda HOM04D004512 ORTHO04D005540 1.3e-130 469.5 403 55.6
Cc02_g22460 Coffea canephora HOM04D004512 ORTHO04D005540 1.4e-129 466.1 405 57.0
Manes.07G015400 Manihot esculenta HOM04D004512 ORTHO04D005540 1.2e-128 463.0 405 55.6
Glyma.15G046900 Glycine max HOM04D004512 ORTHO04D005540 2.1e-128 462.2 407 55.5
ZJU.LOC107427104 Ziziphus jujuba HOM04D004512 ORTHO04D005540 3.5e-128 461.5 405 55.3
Ciclev10001293m.g Citrus clementina HOM04D004512 ORTHO04D005540 6.0e-128 460.7 405 55.1
Achn231501 Actinidia chinensis HOM04D004512 ORTHO04D005540 1.7e-127 459.1 405 55.6
ZJU.LOC107427094 Ziziphus jujuba HOM04D004512 ORTHO04D005540 6.6e-127 457.2 402 55.2
HBR3620G059 Hevea brasiliensis HOM04D004512 ORTHO04D005540 6.6e-127 457.2 405 55.1
Glyma.08G185900 Glycine max HOM04D004512 ORTHO04D005540 1.5e-126 456.1 405 55.1
Medtr2g007220 Medicago truncatula HOM04D004512 ORTHO04D005540 1.9e-126 455.7 405 55.3
Gorai.008G042100 Gossypium raimondii HOM04D004512 ORTHO04D005540 1.9e-126 455.7 405 55.8
Prupe.1G568000 Prunus persica HOM04D004512 ORTHO04D005540 4.3e-126 454.5 407 54.8
Cla002372.g Citrullus lanatus HOM04D004512 ORTHO04D005540 4.3e-126 454.5 405 53.8
Achn247221 Actinidia chinensis HOM04D004512 ORTHO04D005540 5.6e-126 454.1 405 55.1
COL.COLO4_17869 Corchorus olitorius HOM04D004512 ORTHO04D005540 1.2e-125 453.0 405 54.8
Cucsa.184620 Cucumis sativus L. HOM04D004512 ORTHO04D005540 1.6e-125 452.6 405 54.1
MELO3C014388 Cucumis melo HOM04D004512 ORTHO04D005540 2.1e-125 452.2 405 53.8
TPR.G2126 Trifolium pratense HOM04D004512 ORTHO04D005540 2.8e-125 451.8 402 55.5
DCAR_031890 Daucus carota HOM04D004512 ORTHO04D005540 2.8e-125 451.8 404 55.2
RCO.g.27732.000016 Ricinus communis HOM04D004512 ORTHO04D005540 2.8e-125 451.8 405 54.8
Gorai.002G210900 Gossypium raimondii HOM04D004512 ORTHO04D005540 3.6e-125 451.4 405 54.6
TCA.TCM_006393 Theobroma cacao HOM04D004512 ORTHO04D005540 1.1e-124 449.9 405 54.8
Potri.001G210800 Populus trichocarpa HOM04D004512 ORTHO04D005540 1.4e-124 449.5 405 53.6
Vradi10g12990 Vigna radiata var. radiata HOM04D004512 ORTHO04D005540 1.8e-124 449.1 405 54.6
FVE11741 Fragaria vesca HOM04D004512 ORTHO04D005540 1.2e-123 446.4 405 53.6
Peaxi162Scf00011g00352 Petunia axillaris HOM04D004512 ORTHO04D005540 3.4e-123 444.9 407 54.3
Araip.BXY3B Arachis ipaensis HOM04D004512 ORTHO04D005540 3.4e-123 444.9 405 53.8
HBR3620G010 Hevea brasiliensis HOM04D004512 ORTHO04D005540 2.9e-122 441.8 428 51.9
Cpa.g.sc113.63 Carica papaya HOM04D004512 ORTHO04D005540 3.8e-122 441.4 405 53.6
DCAR_013987 Daucus carota HOM04D004512 ORTHO04D005540 4.9e-122 441.0 404 53.7
Glyma.08G127900 Glycine max HOM04D004512 ORTHO04D005540 2.4e-121 438.7 408 52.9
Ca_00072.g Cicer arietinum HOM04D004512 ORTHO04D005540 9.3e-121 436.8 403 53.6
Glyma.05G169600 Glycine max HOM04D004512 ORTHO04D005540 1.6e-120 436.0 408 53.4
PGSC0003DMG400023758 Solanum tuberosum HOM04D004512 ORTHO04D005540 2.7e-120 435.3 402 54.2
AUR62002965 Chenopodium quinoa HOM04D004512 ORTHO04D005540 4.6e-120 434.5 410 52.7
C.cajan_17221.g Cajanus cajan HOM04D004512 ORTHO04D005540 7.8e-120 433.7 407 51.8
AUR62007773 Chenopodium quinoa HOM04D004512 ORTHO04D005540 1.3e-119 433.0 410 52.4
Bv6_140760_qaxa Beta vulgaris HOM04D004512 ORTHO04D005540 2.3e-119 432.2 410 52.0
CAN.G1577.14 Capsicum annuum HOM04D004512 ORTHO04D005540 3.9e-119 431.4 403 53.1
AT1G10780 Arabidopsis thaliana HOM04D004512 ORTHO04D005540 1.5e-118 429.5 405 53.3
THA.LOC104819321 Tarenaya hassleriana HOM04D004512 ORTHO04D005540 1.9e-118 429.1 405 52.6
Migut.N01041 Erythranthe guttata HOM04D004512 ORTHO04D005540 3.3e-118 428.3 407 54.5
THA.LOC104809588 Tarenaya hassleriana HOM04D004512 ORTHO04D005540 4.3e-118 427.9 404 51.5
Tp1g09480 Schrenkiella parvula HOM04D004512 ORTHO04D005540 2.8e-117 425.2 405 52.6
AL1G21710 Arabidopsis lyrata HOM04D004512 ORTHO04D005540 6.2e-117 424.1 405 53.6
GSVIVG01022967001 Vitis vinifera HOM04D004512 ORTHO04D005540 1.1e-116 423.3 409 52.8
HBR0913G005 Hevea brasiliensis HOM04D004512 ORTHO04D005540 4.0e-116 421.4 413 50.4
HBR3531G025 Hevea brasiliensis HOM04D004512 ORTHO04D005540 3.4e-115 418.3 405 51.6
Carubv10009265m.g Capsella rubella HOM04D004512 ORTHO04D005540 9.9e-115 416.8 405 52.3
Brara.I05189 Brassica rapa HOM04D004512 ORTHO04D005540 3.8e-114 414.8 405 51.6
UGI.Scf00435.15842 Utricularia gibba HOM04D004512 ORTHO04D005540 1.9e-113 412.5 405 51.6
Bo8g109260 Brassica oleracea HOM04D004512 ORTHO04D005540 2.4e-113 412.1 405 51.4
Mapoly0113s0005 Marchantia polymorpha HOM04D004512 ORTHO04D005540 5.1e-111 404.4 407 47.7
Solyc01g104230.2 Solanum lycopersicum HOM04D004512 ORTHO04D005540 1.0e-103 380.2 339 56.3
C.cajan_20444.g Cajanus cajan HOM04D004512 ORTHO04D005540 2.5e-102 375.6 406 48.0
Vradi07g19150 Vigna radiata var. radiata HOM04D004512 ORTHO04D005540 1.2e-99 366.7 407 47.2
AH005450 Amaranthus hypochondriacus HOM04D004512 ORTHO04D005540 1.5e-99 366.3 398 47.0
TCA.TCM_006391 Theobroma cacao HOM04D004512 ORTHO04D005540 7.6e-99 364.0 408 45.8
NNU_24726 Nelumbo nucifera HOM04D004512 ORTHO04D005540 1.6e-96 356.3 369 49.3
SMO169G0280 Selaginella moellendorffii HOM04D004512 ORTHO04D005540 3.8e-90 335.1 399 45.1
MDO.mRNA.g.4594.21 Malus domestica HOM04D004512 ORTHO04D005540 3.8e-90 335.1 377 48.3
Potri.003G019400 Populus trichocarpa HOM04D004512 ORTHO04D005540 1.7e-69 266.5 285 47.4
HBR0913G006 Hevea brasiliensis HOM04D004512 ORTHO04D005540 2.4e-68 262.7 217 59.0
MDO.mRNA.g.194.6 Malus domestica HOM04D004512 ORTHO04D005540 1.8e-63 246.5 363 39.4
Araip.C1VZN Arachis ipaensis HOM04D004512 ORTHO04D005540 8.5e-58 227.6 251 48.2
MDO.mRNA.g.2486.6 Malus domestica HOM04D004512 ORTHO04D005540 1.2e-27 127.5 106 53.8
Araip.EZS4N Arachis ipaensis HOM04D004512 ORTHO04D005540 8.6e-26 121.3 88 61.4
Araip.E2F8P Arachis ipaensis HOM04D004512 ORTHO04D005540 1.5e-25 120.6 88 61.4
MDO.mRNA.g.164.6 Malus domestica HOM04D004512 ORTHO04D005540 6.6e-18 95.1 266 27.4
MDO.mRNA.g.2486.7 Malus domestica HOM04D004512 ORTHO04D005540 3.3e-17 92.8 136 39.0
SMO111G0157 Selaginella moellendorffii HOM04D015421 ORTHO04D018254 9.9e-14 81.3 420 26.9
PAB00004026 Picea abies HOM04D004512 ORTHO04D005540 5.8e-06 55.5 39 66.7

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (4 genes)
Beta vulgaris (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (4 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (5 genes)
Malus domestica (5 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Oryza sativa ssp. japonica (2 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (0 genes)
Picea abies (1 genes)
Populus trichocarpa (2 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (0 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (2 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)
Ziziphus jujuba (2 genes)

Program Settings