Interactive Phylogenetics Module

Gene Id
Zm00001d005507

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d005507 Zea mays HOM04D003457 ORTHO04D004131 0.0e+00 3100.1 1607 100.0
LOC_Os09g10960 Oryza sativa ssp. japonica HOM04D003457 ORTHO04D004131 0.0e+00 2454.5 1633 78.0
GSVIVG01021781001 Vitis vinifera HOM04D003457 ORTHO04D004131 0.0e+00 1709.1 1639 56.8
ZJU.LOC107412197 Ziziphus jujuba HOM04D003457 ORTHO04D004131 0.0e+00 1698.7 1734 55.2
Manes.09G152800 Manihot esculenta HOM04D003457 ORTHO04D004131 0.0e+00 1692.9 1742 54.4
RCO.g.29598.000021 Ricinus communis HOM04D003457 ORTHO04D004131 0.0e+00 1688.7 1679 56.3
Ciclev10000014m.g Citrus clementina HOM04D003457 ORTHO04D004131 0.0e+00 1682.5 1723 55.0
C.cajan_10759.g Cajanus cajan HOM04D003457 ORTHO04D004131 0.0e+00 1682.2 1674 55.9
HBR1657G064 Hevea brasiliensis HOM04D003457 ORTHO04D004131 0.0e+00 1677.9 1742 54.7
Potri.005G053700 Populus trichocarpa HOM04D003457 ORTHO04D004131 0.0e+00 1674.1 1731 54.7
Prupe.6G343600 Prunus persica HOM04D003457 ORTHO04D004131 0.0e+00 1658.7 1745 54.4
Glyma.19G245100 Glycine max HOM04D003457 ORTHO04D004131 0.0e+00 1653.3 1722 53.8
Vradi10g05680 Vigna radiata var. radiata HOM04D003457 ORTHO04D004131 0.0e+00 1652.5 1720 54.8
Cucsa.133270 Cucumis sativus L. HOM04D003457 ORTHO04D004131 0.0e+00 1652.1 1709 55.5
MELO3C004380 Cucumis melo HOM04D003457 ORTHO04D004131 0.0e+00 1646.7 1705 55.0
HBR1944G012 Hevea brasiliensis HOM04D003457 ORTHO04D004131 0.0e+00 1645.6 1739 53.8
Gorai.004G246800 Gossypium raimondii HOM04D003457 ORTHO04D004131 0.0e+00 1641.3 1717 54.0
Cla019807.g Citrullus lanatus HOM04D003457 ORTHO04D004131 0.0e+00 1639.8 1702 54.8
Peaxi162Scf00282g00418 Petunia axillaris HOM04D003457 ORTHO04D004131 0.0e+00 1629.4 1700 52.9
Medtr7g115190 Medicago truncatula HOM04D003457 ORTHO04D004131 0.0e+00 1626.3 1695 54.0
Glyma.03G247300 Glycine max HOM04D003457 ORTHO04D004131 0.0e+00 1626.3 1719 53.1
TCA.TCM_026345 Theobroma cacao HOM04D003457 ORTHO04D004131 0.0e+00 1624.0 1719 53.9
Solyc01g097320.2 Solanum lycopersicum HOM04D003457 ORTHO04D004131 0.0e+00 1620.5 1693 52.9
Ca_01236.g Cicer arietinum HOM04D003457 ORTHO04D004131 0.0e+00 1620.5 1714 52.7
COL.COLO4_15351 Corchorus olitorius HOM04D003457 ORTHO04D004131 0.0e+00 1606.3 1712 53.7
FVE16566 Fragaria vesca HOM04D003457 ORTHO04D004131 0.0e+00 1604.7 1736 53.1
DCAR_023243 Daucus carota HOM04D003457 ORTHO04D004131 0.0e+00 1603.6 1704 52.9
AUR62004951 Chenopodium quinoa HOM04D003457 ORTHO04D004131 0.0e+00 1603.2 1699 53.2
Cc02_g30700 Coffea canephora HOM04D003457 ORTHO04D004131 0.0e+00 1596.3 1705 51.8
THA.LOC104818630 Tarenaya hassleriana HOM04D003457 ORTHO04D004131 0.0e+00 1579.3 1639 54.0
ATR0665G632 Amborella trichopoda HOM04D003457 ORTHO04D004131 0.0e+00 1578.5 1757 51.9
Pbr004360.1.g Pyrus bretschneideri HOM04D003457 ORTHO04D004131 0.0e+00 1565.8 1728 51.7
Araip.DEM3R Arachis ipaensis HOM04D003457 ORTHO04D004131 0.0e+00 1562.7 1719 52.4
DCAR_014751 Daucus carota HOM04D003457 ORTHO04D004131 0.0e+00 1559.3 1712 51.8
TPR.G6924 Trifolium pratense HOM04D003457 ORTHO04D004131 0.0e+00 1556.6 1705 52.6
Bv4_082280_jwgm Beta vulgaris HOM04D003457 ORTHO04D004131 0.0e+00 1555.0 1693 52.5
Eucgr.B02119 Eucalyptus grandis HOM04D003457 ORTHO04D004131 0.0e+00 1553.5 1646 53.2
Medtr1g087060 Medicago truncatula HOM04D003457 ORTHO04D004131 0.0e+00 1553.1 1678 53.0
AL3G14870 Arabidopsis lyrata HOM04D003457 ORTHO04D004131 0.0e+00 1551.6 1641 52.4
Achn370471 Actinidia chinensis HOM04D003457 ORTHO04D004131 0.0e+00 1551.2 1702 53.0
AT3G04740 Arabidopsis thaliana HOM04D003457 ORTHO04D004131 0.0e+00 1550.8 1645 51.6
Migut.B01091 Erythranthe guttata HOM04D003457 ORTHO04D004131 0.0e+00 1536.5 1734 50.6
Carubv10012804m.g Capsella rubella HOM04D003457 ORTHO04D004131 0.0e+00 1531.2 1641 52.4
Tp3g03590 Schrenkiella parvula HOM04D003457 ORTHO04D004131 0.0e+00 1527.7 1653 52.3
THA.LOC104821672 Tarenaya hassleriana HOM04D003457 ORTHO04D004131 0.0e+00 1516.1 1675 52.1
AUR62001006 Chenopodium quinoa HOM04D003457 ORTHO04D004131 0.0e+00 1497.3 1700 50.7
Brara.E03427 Brassica rapa HOM04D003457 ORTHO04D004131 0.0e+00 1480.3 1619 52.1
Bo5g147020 Brassica oleracea HOM04D003457 ORTHO04D004131 0.0e+00 1470.7 1614 51.5
UGI.Scf00027.3309 Utricularia gibba HOM04D003457 ORTHO04D004131 0.0e+00 1421.0 1652 49.5
LOC_Os08g24420 Oryza sativa ssp. japonica HOM04D003457 ORTHO04D004131 0.0e+00 1343.6 1193 64.7
AH010805 Amaranthus hypochondriacus HOM04D003457 ORTHO04D004131 0.0e+00 1168.3 1325 52.7
Mapoly0110s0011 Marchantia polymorpha HOM04D003457 ORTHO04D004131 0.0e+00 1122.5 1888 39.8
Potri.013G041201 Populus trichocarpa HOM04D003457 ORTHO04D004131 5.3e-310 1067.4 1006 60.1
SMO118G0536 Selaginella moellendorffii HOM04D003457 ORTHO04D004131 1.4e-294 1016.1 1665 39.0
CAN.G134.97 Capsicum annuum HOM04D003457 ORTHO04D004131 1.1e-280 969.9 1124 46.9
Pp3c9_5080 Physcomitrium patens HOM04D003457 ORTHO04D004131 4.6e-266 921.4 1827 35.0
Pp3c9_4280 Physcomitrium patens HOM04D003457 ORTHO04D004131 6.9e-262 907.5 1878 34.5
MDO.mRNA.g.1214.38 Malus domestica HOM04D003457 ORTHO04D004131 2.4e-190 669.8 1400 36.4
MDO.mRNA.g.1570.9 Malus domestica HOM04D003457 ORTHO04D004131 2.8e-178 629.8 759 49.3
Araip.Z5FIW Arachis ipaensis HOM04D003457 ORTHO04D004131 7.1e-174 615.1 1066 38.1
CAN.G134.96 Capsicum annuum HOM04D003457 ORTHO04D004131 5.6e-171 605.5 475 68.6
Cpa.g.sc2756.2 Carica papaya HOM04D003457 ORTHO04D004131 3.0e-164 583.2 468 63.5
NNU_14283 Nelumbo nucifera HOM04D003457 ORTHO04D004131 1.3e-154 551.2 452 69.0
LOC_Os08g24400 Oryza sativa ssp. japonica HOM04D003457 ORTHO04D004131 1.1e-129 468.4 320 70.6
AH010806 Amaranthus hypochondriacus HOM04D003457 ORTHO04D004131 1.2e-115 421.8 364 56.6
PAB00015527 Picea abies HOM04D003457 ORTHO04D004131 1.2e-115 421.8 453 55.6
NNU_14282 Nelumbo nucifera HOM04D003457 ORTHO04D004131 8.6e-111 405.6 317 61.2
Cpa.g.c42029 Carica papaya HOM04D003457 ORTHO04D004131 1.6e-109 401.4 317 62.1
Araip.3CL0P Arachis ipaensis HOM04D003457 ORTHO04D004131 3.4e-107 393.7 362 54.1
Cpa.g.sc2756.1 Carica papaya HOM04D003457 ORTHO04D004131 6.8e-92 342.8 264 78.4
Araip.G7VB0 Arachis ipaensis HOM04D003457 ORTHO04D004131 1.9e-65 255.0 214 58.4
PAB00028221 Picea abies HOM04D003457 ORTHO04D004131 5.1e-55 220.3 246 52.0
Cpa.g.sc2756.3 Carica papaya HOM04D003457 ORTHO04D004131 6.7e-55 219.9 361 40.2
PAB00015301 Picea abies HOM04D003457 ORTHO04D004131 3.3e-54 217.6 224 53.1
Araip.4E2GG Arachis ipaensis HOM04D003457 ORTHO04D004131 1.6e-45 188.7 376 35.9
PAB00057672 Picea abies HOM04D003457 ORTHO04D004131 1.4e-44 185.7 155 51.6
PAB00015300 Picea abies HOM04D003457 ORTHO04D004131 4.5e-43 180.6 266 43.2
PAB00015525 Picea abies HOM04D003457 ORTHO04D004131 2.7e-40 171.4 146 58.2
MDO.mRNA.g.1214.37 Malus domestica HOM04D003457 ORTHO04D004131 1.9e-33 148.7 143 55.9
PAB00014440 Picea abies HOM04D003457 ORTHO04D004131 5.9e-27 127.1 108 57.4
PAB00046164 Picea abies HOM04D000420 ORTHO04D004131 3.2e-25 121.3 105 55.2
PAB00044175 Picea abies HOM04D003457 ORTHO04D004131 1.1e-12 79.7 72 45.8
PAB00029086 Picea abies HOM04D003457 ORTHO04D004131 1.8e-12 79.0 146 32.9
PAB00062172 Picea abies HOM04D003457 ORTHO04D004131 1.0e-07 63.2 69 49.3
PAB00017816 Picea abies HOM04D001763 ORTHO04D002207 1.5e-06 59.3 118 41.5
Gorai.004G036500 Gossypium raimondii HOM04D003457 ORTHO04D004131 2.0e-06 58.9 34 67.6

Actinidia chinensis (1 genes)
Amaranthus hypochondriacus (2 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (5 genes)
Beta vulgaris (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Cajanus cajan (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Carica papaya (4 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (2 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Oryza sativa ssp. japonica (3 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (12 genes)
Populus trichocarpa (2 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (1 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (0 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

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