Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
TPR.G10066	Trifolium pratense	HOM04D000682	ORTHO04D000199	1.1e-40	168.3	78	100.0
TPR.G40139	Trifolium pratense	HOM04D000025	ORTHO04D000010	2.7e-18	94.0	67	56.7
Medtr6g445520	Medicago truncatula	HOM04D000682	ORTHO04D000199	8.6e-17	89.0	69	50.7
Medtr2g048560	Medicago truncatula	HOM04D000682	ORTHO04D000199	1.1e-16	88.6	70	52.9
TPR.G7855	Trifolium pratense	HOM04D000025	ORTHO04D000010	7.3e-16	85.9	69	50.7
Medtr3g056270	Medicago truncatula	HOM04D000682	ORTHO04D000199	1.1e-14	82.0	69	47.8
Medtr4g036240	Medicago truncatula	HOM04D000682	ORTHO04D000199	1.1e-14	82.0	69	47.8
TPR.G34472	Trifolium pratense	HOM04D000682	ORTHO04D000199	4.0e-14	80.1	69	47.8
TPR.G26714	Trifolium pratense	HOM04D000682	ORTHO04D000199	4.0e-14	80.1	69	50.7
TPR.G19823	Trifolium pratense	HOM04D000682	ORTHO04D000199	1.2e-13	78.6	69	50.7
TPR.G36881	Trifolium pratense	HOM04D000682	ORTHO04D016682	2.0e-13	77.8	67	47.8
TPR.G17919	Trifolium pratense	HOM04D016945	ORTHO04D000199	2.0e-13	77.8	69	47.8
TPR.G35040	Trifolium pratense	HOM04D000682	ORTHO04D000199	9.9e-13	75.5	69	47.8
TPR.G20476	Trifolium pratense	HOM04D000682	ORTHO04D000199	1.3e-12	75.1	69	44.9
Araip.QP85T	Arachis ipaensis	HOM04D000682	ORTHO04D000199	2.4e-11	70.9	76	39.5
Araip.HQ3ET	Arachis ipaensis	HOM04D000682	ORTHO04D000199	4.1e-11	70.1	76	39.5
TPR.G16855	Trifolium pratense	HOM04D000682	ORTHO04D000199	4.1e-11	70.1	69	39.1
TPR.G27579	Trifolium pratense	HOM04D000682	ORTHO04D000199	5.4e-11	69.7	69	37.7
TPR.G15524	Trifolium pratense	HOM04D000682	ORTHO04D000199	5.4e-11	69.7	69	39.1
TPR.G26497	Trifolium pratense	HOM04D000682	ORTHO04D000199	7.1e-11	69.3	69	39.1
TPR.G2530	Trifolium pratense	HOM04D000682	ORTHO04D000199	9.2e-11	68.9	69	46.4
Araip.81QNS	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.2e-10	68.6	76	38.2
TPR.G39727	Trifolium pratense	HOM04D000682	ORTHO04D000199	1.6e-10	68.2	72	38.9
Araip.H8L31	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.6e-10	68.2	69	42.0
Araip.I0RKL	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.6e-10	68.2	69	42.0
TPR.G39019	Trifolium pratense	HOM04D000682	ORTHO04D000199	1.6e-10	68.2	68	39.7
TPR.G14129	Trifolium pratense	HOM04D000682	ORTHO04D000199	1.6e-10	68.2	69	37.7
Araip.CS9Y3	Arachis ipaensis	HOM04D000682	ORTHO04D000199	2.1e-10	67.8	76	36.8
TPR.G17763	Trifolium pratense	HOM04D000682	ORTHO04D000199	2.1e-10	67.8	68	38.2
Araip.NME71	Arachis ipaensis	HOM04D000682	ORTHO04D000199	2.1e-10	67.8	69	40.6
Medtr2g048550	Medicago truncatula	HOM04D000682	ORTHO04D000199	2.7e-10	67.4	73	34.2
Araip.Q2ES3	Arachis ipaensis	HOM04D000682	ORTHO04D000199	2.7e-10	67.4	69	40.6
Araip.P35VR	Arachis ipaensis	HOM04D000682	ORTHO04D000199	2.7e-10	67.4	69	40.6
Araip.E607S	Arachis ipaensis	HOM04D000682	ORTHO04D000199	2.7e-10	67.4	69	40.6
TPR.G38513	Trifolium pratense	HOM04D000682	ORTHO04D000199	3.5e-10	67.0	66	39.4
Araip.F73Y8	Arachis ipaensis	HOM04D000682	ORTHO04D000199	3.5e-10	67.0	76	38.2
TPR.G30682	Trifolium pratense	HOM04D000025	ORTHO04D000010	3.5e-10	67.0	73	37.0
Araip.77KY5	Arachis ipaensis	HOM04D000682	ORTHO04D000199	3.5e-10	67.0	69	40.6
Medtr8g479260	Medicago truncatula	HOM04D000682	ORTHO04D000199	3.5e-10	67.0	69	37.7
Araip.A02VN	Arachis ipaensis	HOM04D000682	ORTHO04D000199	3.5e-10	67.0	69	42.0
Medtr2g008650	Medicago truncatula	HOM04D000682	ORTHO04D000199	3.5e-10	67.0	69	37.7
Araip.S9T92	Arachis ipaensis	HOM04D000682	ORTHO04D000199	4.6e-10	66.6	69	40.6
Araip.33LUJ	Arachis ipaensis	HOM04D000682	ORTHO04D000199	4.6e-10	66.6	69	40.6
Araip.PE7RQ	Arachis ipaensis	HOM04D000682	ORTHO04D000199	6.0e-10	66.2	76	38.2
Araip.S56UV	Arachis ipaensis	HOM04D000682	ORTHO04D000199	6.0e-10	66.2	69	40.6
TPR.G8849	Trifolium pratense	HOM04D000682	ORTHO04D000199	6.0e-10	66.2	68	38.2
Medtr4g040040	Medicago truncatula	HOM04D000682	ORTHO04D000199	7.8e-10	65.9	66	39.4
Medtr8g062030	Medicago truncatula	HOM04D000682	ORTHO04D000199	7.8e-10	65.9	68	38.2
Araip.ZCQ9K	Arachis ipaensis	HOM04D000682	ORTHO04D000199	7.8e-10	65.9	68	39.7
Araip.WJ6EV	Arachis ipaensis	HOM04D000682	ORTHO04D000199	7.8e-10	65.9	76	36.8
Araip.I1M8C	Arachis ipaensis	HOM04D000682	ORTHO04D000199	7.8e-10	65.9	69	40.6
Araip.E2YUD	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.0e-09	65.5	69	39.1
Araip.WK19K	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.3e-09	65.1	69	39.1
Araip.H4U4H	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.7e-09	64.7	76	38.2
Araip.LUM54	Arachis ipaensis	HOM04D000682	ORTHO04D000199	3.0e-09	63.9	69	39.1
TPR.G34060	Trifolium pratense	HOM04D000682	ORTHO04D000199	3.9e-09	63.5	69	40.6
TPR.G30051	Trifolium pratense	HOM04D000073	ORTHO04D000199	3.9e-09	63.5	69	42.0
TPR.G16048	Trifolium pratense	HOM04D003031	ORTHO04D003852	6.6e-09	62.8	69	36.2
Araip.VRR30	Arachis ipaensis	HOM04D000682	ORTHO04D000199	8.6e-09	62.4	69	39.1
Araip.RT5HL	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.5e-08	61.6	69	34.8
Araip.B0C0H	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.9e-08	61.2	87	34.5
TPR.G18344	Trifolium pratense	HOM04D000682	ORTHO04D000199	1.9e-08	61.2	99	31.3
Araip.GA1SM	Arachis ipaensis	HOM04D000682	ORTHO04D000199	4.3e-08	60.1	69	33.3
Glyma.03G067500	Glycine max	HOM04D000682	ORTHO04D000199	5.6e-08	59.7	69	36.2
Araip.H1C8T	Arachis ipaensis	HOM04D000682	ORTHO04D000199	8.1e-07	55.8	58	43.1
Araip.W7R5G	Arachis ipaensis	HOM04D000682	ORTHO04D000199	8.1e-07	55.8	71	33.8
Araip.N7BL0	Arachis ipaensis	HOM04D000682	ORTHO04D000199	1.1e-06	55.5	60	38.3
Araip.TL76N	Arachis ipaensis	HOM04D000682	ORTHO04D000199	5.2e-06	53.1	77	33.8
TPR.G33583	Trifolium pratense	HOM04D000682	ORTHO04D000199	5.2e-06	53.1	76	35.5
Araip.Y5WMH	Arachis ipaensis	HOM04D000682	ORTHO04D000199	5.2e-06	53.1	69	34.8
Medtr0042s0170	Medicago truncatula	HOM04D000682	ORTHO04D000199	5.2e-06	53.1	49	44.9
Medtr4g134870	Medicago truncatula	HOM04D002492	ORTHO04D015297	5.2e-06	53.1	74	33.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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