Interactive Phylogenetics Module

Gene Id
TCA.TCM_042787

Contact Settings

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Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TCA.TCM_042787 Theobroma cacao HOM04D006251 ORTHO04D008609 3.4e-207 723.8 381 100.0
COL.COLO4_14996 Corchorus olitorius HOM04D006251 ORTHO04D008609 1.4e-181 638.6 360 86.1
Gorai.011G256900 Gossypium raimondii HOM04D006251 ORTHO04D008609 1.9e-181 638.3 385 82.1
Cpa.g.sc1.396 Carica papaya HOM04D006251 ORTHO04D008609 2.0e-159 565.1 340 77.6
ZJU.LOC107413498 Ziziphus jujuba HOM04D006251 ORTHO04D008609 1.4e-157 558.9 343 76.4
RCO.g.29887.000004 Ricinus communis HOM04D006251 ORTHO04D008609 1.9e-157 558.5 341 75.7
GSVIVG01016534001 Vitis vinifera HOM04D006251 ORTHO04D008609 2.4e-157 558.1 340 76.2
Ciclev10031583m.g Citrus clementina HOM04D006251 ORTHO04D008609 2.7e-156 554.7 341 76.5
Prupe.2G233300 Prunus persica HOM04D006251 ORTHO04D008609 3.9e-155 550.8 344 76.7
Manes.10G031500 Manihot esculenta HOM04D006251 ORTHO04D008609 2.1e-153 545.0 341 74.8
Potri.008G054500 Populus trichocarpa HOM04D006251 ORTHO04D008609 4.0e-152 540.8 341 74.8
Bo4g026280 Brassica oleracea HOM04D006251 ORTHO04D008609 7.6e-151 536.6 341 74.2
Pbr032359.1.g Pyrus bretschneideri HOM04D006251 ORTHO04D008609 1.1e-149 532.7 345 73.0
Cla004679.g Citrullus lanatus HOM04D006251 ORTHO04D008609 2.5e-149 531.6 338 73.4
Achn008091 Actinidia chinensis HOM04D006251 ORTHO04D008609 1.2e-148 529.3 341 73.3
Cucsa.010650 Cucumis sativus L. HOM04D006251 ORTHO04D008609 2.7e-148 528.1 338 73.1
Tp4g21840 Schrenkiella parvula HOM04D006251 ORTHO04D008609 2.3e-147 525.0 341 73.0
THA.LOC104824271 Tarenaya hassleriana HOM04D006251 ORTHO04D008609 5.1e-147 523.9 333 72.7
Eucgr.J00022 Eucalyptus grandis HOM04D006251 ORTHO04D008609 5.1e-147 523.9 342 73.1
AT2G39550 Arabidopsis thaliana HOM04D006251 ORTHO04D008609 6.7e-147 523.5 341 72.1
MELO3C021654 Cucumis melo HOM04D006251 ORTHO04D008609 1.1e-146 522.7 333 73.3
Carubv10025181m.g Capsella rubella HOM04D006251 ORTHO04D008609 1.5e-146 522.3 342 71.9
Brara.E00616 Brassica rapa HOM04D006251 ORTHO04D008609 1.5e-146 522.3 336 72.9
AL4G36960 Arabidopsis lyrata HOM04D006251 ORTHO04D008609 1.9e-146 521.9 341 71.8
Glyma.02G093000 Glycine max HOM04D006251 ORTHO04D008609 3.3e-146 521.2 340 70.6
Migut.F01499 Erythranthe guttata HOM04D006251 ORTHO04D008609 1.3e-145 519.2 342 70.2
C.cajan_25874.g Cajanus cajan HOM04D006251 ORTHO04D008609 2.4e-144 515.0 340 70.0
NNU_12286 Nelumbo nucifera HOM04D006251 ORTHO04D008609 2.4e-144 515.0 363 68.3
FVE26634 Fragaria vesca HOM04D006251 ORTHO04D008609 2.4e-144 515.0 342 69.9
Peaxi162Scf00015g00149 Petunia axillaris HOM04D006251 ORTHO04D008609 5.3e-144 513.8 341 70.1
CAN.G1013.12 Capsicum annuum HOM04D006251 ORTHO04D008609 7.7e-143 510.0 338 70.7
PGSC0003DMG400023528 Solanum tuberosum HOM04D006251 ORTHO04D008609 1.3e-142 509.2 335 71.0
TPR.G15521 Trifolium pratense HOM04D006251 ORTHO04D008609 1.3e-142 509.2 340 69.1
Medtr7g024540 Medicago truncatula HOM04D006251 ORTHO04D008609 2.2e-142 508.4 340 68.5
Ca_21029.g Cicer arietinum HOM04D006251 ORTHO04D008609 2.2e-142 508.4 341 69.2
Cc02_g08000 Coffea canephora HOM04D006251 ORTHO04D008609 3.8e-142 507.7 341 69.8
Glyma.18G289300 Glycine max HOM04D006251 ORTHO04D008609 6.5e-142 506.9 332 69.9
Solyc05g054520.2 Solanum lycopersicum HOM04D006251 ORTHO04D008609 5.5e-141 503.8 336 69.9
Araip.3J3Q4 Arachis ipaensis HOM04D006251 ORTHO04D008609 1.2e-140 502.7 340 68.5
AUR62041863 Chenopodium quinoa HOM04D006251 ORTHO04D008609 3.9e-139 497.7 340 68.5
MDO.mRNA.g.706.20 Malus domestica HOM04D006251 ORTHO04D008609 1.9e-138 495.4 354 69.5
MDO.mRNA.g.130.29 Malus domestica HOM04D006251 ORTHO04D008609 2.4e-136 488.4 371 66.0
Bv2_037590_perr Beta vulgaris HOM04D006251 ORTHO04D008609 2.0e-135 485.3 340 66.5
AH023453 Amaranthus hypochondriacus HOM04D006251 ORTHO04D008609 1.9e-133 478.8 340 65.9
Vradi04g10730 Vigna radiata var. radiata HOM04D006251 ORTHO04D008609 9.7e-122 439.9 336 62.8
DCAR_012451 Daucus carota HOM04D006251 ORTHO04D008609 2.6e-119 431.8 292 68.8
ATR0559G127 Amborella trichopoda HOM04D006251 ORTHO04D008609 5.0e-118 427.6 323 62.5
Migut.F01631 Erythranthe guttata HOM04D006251 ORTHO04D008609 5.0e-118 427.6 421 53.0
UGI.Scf00139.21036 Utricularia gibba HOM04D006251 ORTHO04D008609 2.0e-114 415.6 350 58.6
Zm00001d039856 Zea mays HOM04D006251 ORTHO04D004515 1.6e-108 396.0 291 63.6
AUR62038353 Chenopodium quinoa HOM04D006251 ORTHO04D008609 1.7e-105 386.0 341 58.9
Pp3c5_25290 Physcomitrium patens HOM04D006251 ORTHO04D008609 1.2e-92 343.2 338 50.0
SMO116G0097 Selaginella moellendorffii HOM04D006251 ORTHO04D008609 1.1e-88 330.1 339 50.7
HBR2926G158 Hevea brasiliensis HOM04D006251 ORTHO04D008609 6.6e-86 320.9 201 74.6
Mapoly0010s0084 Marchantia polymorpha HOM04D006251 ORTHO04D008609 3.1e-83 312.0 342 46.2
LOC_Os01g05680 Oryza sativa ssp. japonica HOM04D006251 ORTHO04D008609 6.8e-75 284.3 203 66.0
HBR1069G006 Hevea brasiliensis HOM04D006251 ORTHO04D008609 2.5e-53 212.6 130 73.8
Potri.010G206001 Populus trichocarpa HOM04D006251 ORTHO04D008609 1.4e-43 180.3 106 74.5
Eucgr.G01411 Eucalyptus grandis HOM04D003597 ORTHO04D004270 2.9e-33 146.0 234 36.3
Cla015388.g Citrullus lanatus HOM04D003597 ORTHO04D004270 1.4e-32 143.7 300 32.0
NNU_15474 Nelumbo nucifera HOM04D003597 ORTHO04D004270 2.5e-32 142.9 302 30.8
PAB00029491 Picea abies HOM04D006251 ORTHO04D008609 2.5e-32 142.9 99 62.6
Peaxi162Scf00571g00532 Petunia axillaris HOM04D003597 ORTHO04D004270 3.2e-32 142.5 302 31.8
DCAR_023465 Daucus carota HOM04D003597 ORTHO04D004270 2.1e-31 139.8 301 30.9
AH018901 Amaranthus hypochondriacus HOM04D003597 ORTHO04D004270 2.3e-30 136.3 193 37.8
Peaxi162Scf00314g00337 Petunia axillaris HOM04D003597 ORTHO04D004270 3.0e-30 136.0 341 29.9
RCO.g.28098.000008 Ricinus communis HOM04D003597 ORTHO04D004270 5.1e-30 135.2 193 37.8
Prupe.6G347800 Prunus persica HOM04D005437 ORTHO04D006817 4.3e-29 132.1 273 30.4
SMO172G0207 Selaginella moellendorffii HOM04D005437 ORTHO04D006817 2.2e-28 129.8 183 38.3
PGSC0003DMG400005677 Solanum tuberosum HOM04D003597 ORTHO04D004270 3.7e-28 129.0 228 33.3
Bv2_045540_irrp Beta vulgaris HOM04D005437 ORTHO04D006817 4.8e-28 128.6 313 28.8
Cre14.g612500 Chlamydomonas reinhardtii HOM04D005437 ORTHO04D006817 6.3e-28 128.3 281 32.0
AH017191 Amaranthus hypochondriacus HOM04D005437 ORTHO04D006817 8.2e-28 127.9 386 25.6
Tp7g01660 Schrenkiella parvula HOM04D005437 ORTHO04D006817 8.2e-28 127.9 247 31.2
Medtr6g007165 Medicago truncatula HOM04D005437 ORTHO04D006817 8.2e-28 127.9 271 31.4
GSVIVG01032478001 Vitis vinifera HOM04D005437 ORTHO04D006817 1.8e-27 126.7 274 32.1
Migut.H00120 Erythranthe guttata HOM04D005437 ORTHO04D006817 1.8e-27 126.7 372 26.1
Manes.17G121600 Manihot esculenta HOM04D005437 ORTHO04D006817 3.1e-27 125.9 371 26.1
Araip.IA76A Arachis ipaensis HOM04D005437 ORTHO04D006817 4.1e-27 125.6 183 36.6
ATR0730G137 Amborella trichopoda HOM04D005437 ORTHO04D006817 4.1e-27 125.6 270 31.9
Vradi01g00830 Vigna radiata var. radiata HOM04D005437 ORTHO04D006817 6.9e-27 124.8 188 36.7
Eucgr.I01812 Eucalyptus grandis HOM04D005437 ORTHO04D006817 1.5e-26 123.6 189 37.0
Prupe.3G284100 Prunus persica HOM04D005437 ORTHO04D006817 1.5e-26 123.6 271 30.6
THA.LOC104805397 Tarenaya hassleriana HOM04D005437 ORTHO04D006817 5.9e-26 121.7 271 29.9
Glyma.13G168600 Glycine max HOM04D005437 ORTHO04D006817 1.0e-25 120.9 179 35.2
Mapoly0123s0027 Marchantia polymorpha HOM04D005437 ORTHO04D006817 1.0e-25 120.9 266 30.8
AT5G40280 Arabidopsis thaliana HOM04D005437 ORTHO04D006817 1.7e-25 120.2 266 29.7
Bo4g026190 Brassica oleracea HOM04D006251 ORTHO04D008609 2.2e-25 119.8 78 70.5
Cpa.g.sc39.89 Carica papaya HOM04D005437 ORTHO04D006817 2.2e-25 119.8 375 25.6
Cucsa.339700 Cucumis sativus L. HOM04D005437 ORTHO04D006817 2.9e-25 119.4 376 26.6
Cc07_g02250 Coffea canephora HOM04D005437 ORTHO04D006817 3.8e-25 119.0 174 36.2
TPR.G2274 Trifolium pratense HOM04D005437 ORTHO04D006817 5.0e-25 118.6 296 29.4
AUR62035657 Chenopodium quinoa HOM04D003597 ORTHO04D004270 6.5e-25 118.2 153 38.6
Carubv10007691m.g Capsella rubella HOM04D005437 ORTHO04D006817 8.5e-25 117.9 177 36.2
Glyma.06G185500 Glycine max HOM04D005437 ORTHO04D006817 1.1e-24 117.5 179 34.6
Brara.D01232 Brassica rapa HOM04D005437 ORTHO04D006817 1.1e-24 117.5 177 35.0
Ciclev10015290m.g Citrus clementina HOM04D005437 ORTHO04D006817 1.1e-24 117.5 189 36.0
MELO3C009957 Cucumis melo HOM04D005437 ORTHO04D006817 1.9e-24 116.7 371 26.7
ZJU.LOC107415381 Ziziphus jujuba HOM04D005437 ORTHO04D006817 1.9e-24 116.7 271 28.8
HBR1900G033 Hevea brasiliensis HOM04D005437 ORTHO04D006817 1.9e-24 116.7 189 36.0
C.cajan_23445.g Cajanus cajan HOM04D003597 ORTHO04D004270 9.4e-24 114.4 149 38.9
Potri.017G073200 Populus trichocarpa HOM04D005437 ORTHO04D006817 1.2e-23 114.0 189 34.4
RCO.g.29822.000013 Ricinus communis HOM04D005437 ORTHO04D006817 1.6e-23 113.6 192 34.9
Zm00001d031480 Zea mays HOM04D003597 ORTHO04D004270 1.6e-23 113.6 325 28.0
Glyma.05G153500 Glycine max HOM04D003597 ORTHO04D004270 2.1e-23 113.2 148 39.2
AUR62017150 Chenopodium quinoa HOM04D003597 ORTHO04D004270 2.1e-23 113.2 148 37.8
FVE14342 Fragaria vesca HOM04D003597 ORTHO04D004270 2.7e-23 112.8 245 31.8
COL.COLO4_20947 Corchorus olitorius HOM04D003597 ORTHO04D004270 3.6e-23 112.5 263 29.3
LOC_Os01g53600 Oryza sativa ssp. japonica HOM04D005437 ORTHO04D006817 4.6e-23 112.1 279 28.0
Brara.D01050 Brassica rapa HOM04D005437 ORTHO04D006817 4.6e-23 112.1 177 34.5
Bo4g139930 Brassica oleracea HOM04D005437 ORTHO04D006817 4.6e-23 112.1 177 34.5
HBR0616G034 Hevea brasiliensis HOM04D003597 ORTHO04D004270 1.0e-22 110.9 146 37.7
TCA.TCM_016874 Theobroma cacao HOM04D005437 ORTHO04D006817 3.0e-22 109.4 205 34.1
Ca_12554.g Cicer arietinum HOM04D005437 ORTHO04D006817 5.1e-22 108.6 151 38.4
Zm00001d043555 Zea mays HOM04D005437 ORTHO04D006817 8.8e-22 107.8 332 28.0
FVE28401 Fragaria vesca HOM04D005437 ORTHO04D006817 1.5e-21 107.1 269 29.4
C.cajan_36966.g Cajanus cajan HOM04D005437 ORTHO04D006817 2.0e-21 106.7 177 33.3
Eucgr.G02268 Eucalyptus grandis HOM04D003597 ORTHO04D004270 4.3e-21 105.5 151 37.7
NNU_23798 Nelumbo nucifera HOM04D005437 ORTHO04D006817 1.3e-20 104.0 139 38.8
AUR62040116 Chenopodium quinoa HOM04D005437 ORTHO04D006817 4.8e-20 102.1 179 31.8
DCAR_015040 Daucus carota HOM04D005437 ORTHO04D006817 1.1e-19 100.9 180 33.3
COL.COLO4_03532 Corchorus olitorius HOM04D003597 ORTHO04D004270 3.1e-19 99.4 234 27.8
MCO05G513 Micromonas commoda HOM04D005437 ORTHO04D006817 4.1e-19 99.0 274 28.8
Achn183191 Actinidia chinensis HOM04D003597 ORTHO04D004270 5.9e-18 95.1 407 23.1
Pp3c14_3780 Physcomitrium patens HOM04D005437 ORTHO04D006817 1.7e-17 93.6 133 37.6
Pbr017948.1.g Pyrus bretschneideri HOM04D005437 ORTHO04D006817 2.9e-17 92.8 279 28.0
Bo9g169550 Brassica oleracea HOM04D003597 ORTHO04D004270 2.1e-15 86.7 131 34.4
Pbr024395.1.g Pyrus bretschneideri HOM04D005437 ORTHO04D006817 2.7e-15 86.3 215 28.8
Carubv10001318m.g Capsella rubella HOM04D003597 ORTHO04D004270 6.1e-15 85.1 131 33.6
Manes.04G060700 Manihot esculenta HOM04D003597 ORTHO04D004270 1.4e-14 84.0 131 32.8
NNU_10939 Nelumbo nucifera HOM04D003597 ORTHO04D004270 1.8e-14 83.6 126 34.1
TPR.G25677 Trifolium pratense HOM04D005437 ORTHO04D006817 2.3e-14 83.2 129 34.9
Ca_08549.g Cicer arietinum HOM04D003597 ORTHO04D004270 8.8e-14 81.3 92 40.2
Cucsa.105210 Cucumis sativus L. HOM04D003597 ORTHO04D004270 8.8e-14 81.3 100 39.0
Tp6g31430 Schrenkiella parvula HOM04D003597 ORTHO04D004270 8.8e-14 81.3 100 40.0
Potri.013G012500 Populus trichocarpa HOM04D003597 ORTHO04D004270 1.5e-13 80.5 92 40.2
Brara.J02169 Brassica rapa HOM04D003597 ORTHO04D004270 2.0e-13 80.1 97 40.2
Araip.LTD8F Arachis ipaensis HOM04D003597 ORTHO04D004270 2.6e-13 79.7 92 39.1
AT5G12210 Arabidopsis thaliana HOM04D003597 ORTHO04D004270 3.3e-13 79.3 89 41.6
Vradi07g16780 Vigna radiata var. radiata HOM04D003597 ORTHO04D004270 3.3e-13 79.3 92 39.1
Glyma.08G111200 Glycine max HOM04D003597 ORTHO04D004270 3.3e-13 79.3 92 39.1
Cc04_g06080 Coffea canephora HOM04D003597 ORTHO04D004270 5.7e-13 78.6 89 41.6
CAN.G843.44 Capsicum annuum HOM04D003597 ORTHO04D004270 5.7e-13 78.6 159 30.2
UGI.Scf00035.3992 Utricularia gibba HOM04D005437 ORTHO04D006817 5.7e-13 78.6 350 22.3
THA.LOC104799137 Tarenaya hassleriana HOM04D003597 ORTHO04D004270 7.4e-13 78.2 100 37.0
MELO3C023397 Cucumis melo HOM04D003597 ORTHO04D004270 9.7e-13 77.8 92 39.1
AL6G32390 Arabidopsis lyrata HOM04D006251 ORTHO04D008609 9.7e-13 77.8 191 30.9
Pbr020335.1.g Pyrus bretschneideri HOM04D003597 ORTHO04D004270 1.7e-12 77.0 150 32.7
Brara.C00508 Brassica rapa HOM04D003597 ORTHO04D004270 2.8e-12 76.3 126 32.5
NNU_10940 Nelumbo nucifera HOM04D003597 ORTHO04D004270 3.7e-12 75.9 185 31.9
Peaxi162Scf00129g01124 Petunia axillaris HOM04D005437 ORTHO04D006817 4.8e-12 75.5 275 26.5
DCAR_026891 Daucus carota HOM04D003597 ORTHO04D004270 6.3e-12 75.1 92 38.0
GSVIVG01019372001 Vitis vinifera HOM04D003597 ORTHO04D004270 2.4e-11 73.2 89 38.2
AUR62013259 Chenopodium quinoa HOM04D015340 ORTHO04D017614 2.4e-11 73.2 66 60.6
TPR.G11959 Trifolium pratense HOM04D003597 ORTHO04D004270 9.1e-11 71.2 92 39.1
Gorai.006G029800 Gossypium raimondii HOM04D005437 ORTHO04D006817 9.1e-11 71.2 200 28.0
Eucgr.K00882 Eucalyptus grandis HOM04D003597 ORTHO04D004270 1.2e-10 70.9 83 39.8
Cla007703.g Citrullus lanatus HOM04D003597 ORTHO04D004270 3.5e-10 69.3 160 29.4
RCO.g.29701.000014 Ricinus communis HOM04D003597 ORTHO04D004270 2.9e-09 66.2 85 36.5
Achn323771 Actinidia chinensis HOM04D005437 ORTHO04D006817 3.8e-09 65.9 194 23.7
TCA.TCM_044377 Theobroma cacao HOM04D003597 ORTHO04D004270 3.8e-09 65.9 92 34.8
AUR62032496 Chenopodium quinoa HOM04D005437 ORTHO04D006817 5.0e-09 65.5 111 30.6
Ciclev10015999m.g Citrus clementina HOM04D003597 ORTHO04D004270 5.0e-09 65.5 75 40.0
Pp3c14_22730 Physcomitrium patens HOM04D003597 ORTHO04D004270 4.2e-08 62.4 92 33.7
MDO.mRNA.g.1585.45 Malus domestica HOM04D005437 ORTHO04D006817 7.2e-08 61.6 86 36.0
MDO.mRNA.g.934.2 Malus domestica HOM04D003597 ORTHO04D004270 9.4e-08 61.2 87 35.6
AL6G23000 Arabidopsis lyrata HOM04D003597 ORTHO04D004270 2.1e-07 60.1 97 33.0
ATR0723G050 Amborella trichopoda HOM04D003597 ORTHO04D004270 4.7e-07 58.9 71 36.6
Pp3c16_10570 Physcomitrium patens HOM04D006251 ORTHO04D213934 2.3e-06 56.6 72 40.3
Achn304771 Actinidia chinensis HOM04D003597 ORTHO04D004270 2.3e-06 56.6 77 36.4
MDO.mRNA.g.1708.3 Malus domestica HOM04D005437 ORTHO04D006817 5.2e-06 55.5 71 36.6
Bo3g007570 Brassica oleracea HOM04D003597 ORTHO04D004270 8.8e-06 54.7 98 30.6

Actinidia chinensis (4 genes)
Amaranthus hypochondriacus (3 genes)
Amborella trichopoda (3 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (3 genes)
Arachis ipaensis (3 genes)
Beta vulgaris (2 genes)
Brassica oleracea (5 genes)
Brassica rapa (5 genes)
Cajanus cajan (3 genes)
Capsella rubella (3 genes)
Capsicum annuum (2 genes)
Carica papaya (2 genes)
Chenopodium quinoa (7 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (3 genes)
Citrullus lanatus (3 genes)
Citrus clementina (3 genes)
Coffea canephora (3 genes)
Corchorus olitorius (3 genes)
Cucumis melo (3 genes)
Cucumis sativus L. (3 genes)
Daucus carota (4 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (5 genes)
Fragaria vesca (3 genes)
Glycine max (6 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (4 genes)
Malus domestica (5 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (5 genes)
Oryza sativa ssp. japonica (2 genes)
Petunia axillaris (4 genes)
Physcomitrium patens (4 genes)
Picea abies (1 genes)
Populus trichocarpa (4 genes)
Prunus persica (3 genes)
Pyrus bretschneideri (4 genes)
Ricinus communis (4 genes)
Schrenkiella parvula (3 genes)
Selaginella moellendorffii (2 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (2 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (3 genes)
Trifolium pratense (4 genes)
Utricularia gibba (2 genes)
Vigna radiata var. radiata (3 genes)
Vitis vinifera (3 genes)
Zea mays (3 genes)
Ziziphus jujuba (2 genes)

Program Settings