Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Pbr032360.1.g	Pyrus bretschneideri	HOM04D007051	ORTHO04D009177	9.7e-176	619.0	315	100.0
Prupe.2G233400	Prunus persica	HOM04D007051	ORTHO04D009177	4.7e-146	520.4	315	84.8
FVE26633	Fragaria vesca	HOM04D007051	ORTHO04D009177	9.2e-134	479.6	315	76.8
ZJU.LOC107413528	Ziziphus jujuba	HOM04D007051	ORTHO04D009177	1.2e-122	442.6	315	70.8
TCA.TCM_042786	Theobroma cacao	HOM04D007051	ORTHO04D009177	3.5e-117	424.5	313	66.5
GSVIVG01016535001	Vitis vinifera	HOM04D007051	ORTHO04D009177	5.0e-116	420.6	313	64.9
Ciclev10032197m.g	Citrus clementina	HOM04D007051	ORTHO04D009177	2.1e-114	415.2	315	64.1
Achn007321	Actinidia chinensis	HOM04D007051	ORTHO04D009177	6.8e-113	410.2	315	65.4
Ca_21027.g	Cicer arietinum	HOM04D007051	ORTHO04D009177	3.2e-110	401.4	313	63.9
Cc02_g07990	Coffea canephora	HOM04D007051	ORTHO04D009177	7.1e-110	400.2	313	62.3
Manes.07G114900	Manihot esculenta	HOM04D007051	ORTHO04D009177	9.2e-110	399.8	315	64.1
Gorai.011G257200	Gossypium raimondii	HOM04D007051	ORTHO04D009177	9.2e-110	399.8	313	62.3
Potri.010G205900	Populus trichocarpa	HOM04D007051	ORTHO04D009177	2.7e-109	398.3	315	63.8
Glyma.18G289500	Glycine max	HOM04D007051	ORTHO04D009177	2.3e-108	395.2	313	63.6
Medtr7g024560	Medicago truncatula	HOM04D007051	ORTHO04D009177	2.1e-106	388.7	313	62.3
C.cajan_25875.g	Cajanus cajan	HOM04D007051	ORTHO04D009177	8.1e-106	386.7	313	64.2
Vradi04g10740	Vigna radiata var. radiata	HOM04D007051	ORTHO04D009177	4.9e-103	377.5	313	61.7
AUR62038352	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	1.9e-102	375.6	315	59.0
TPR.G15525	Trifolium pratense	HOM04D007051	ORTHO04D009177	9.2e-102	373.2	313	61.0
Cla004678.g	Citrullus lanatus	HOM04D007051	ORTHO04D009177	1.2e-101	372.9	315	58.7
Migut.F01500	Erythranthe guttata	HOM04D007051	ORTHO04D009177	1.3e-100	369.4	313	56.5
Cucsa.010670	Cucumis sativus L.	HOM04D007051	ORTHO04D009177	8.6e-100	366.7	315	57.8
COL.COLO4_14997	Corchorus olitorius	HOM04D007051	ORTHO04D009177	1.1e-99	366.3	351	54.7
DCAR_027635	Daucus carota	HOM04D007051	ORTHO04D009177	1.1e-99	366.3	313	58.5
MELO3C021650	Cucumis melo	HOM04D007051	ORTHO04D009177	1.9e-99	365.5	315	57.1
MDO.mRNA.g.130.30	Malus domestica	HOM04D007051	ORTHO04D009177	6.2e-98	360.5	248	80.2
Peaxi162Scf00658g00728	Petunia axillaris	HOM04D007051	ORTHO04D009177	1.3e-95	352.8	311	57.9
AH023452	Amaranthus hypochondriacus	HOM04D007051	ORTHO04D009177	2.4e-94	348.6	313	53.7
THA.LOC104799346	Tarenaya hassleriana	HOM04D007051	ORTHO04D009177	3.9e-92	341.3	314	55.7
RCO.g.29887.000005	Ricinus communis	HOM04D007051	ORTHO04D009177	2.0e-88	328.9	257	63.0
ATR0559G284	Amborella trichopoda	HOM04D007051	ORTHO04D009177	2.0e-88	328.9	300	54.3
Bo5g148450	Brassica oleracea	HOM04D007051	ORTHO04D009177	4.5e-88	327.8	314	51.9
Brara.E03472	Brassica rapa	HOM04D007051	ORTHO04D009177	3.8e-87	324.7	314	51.3
Tp3g03000	Schrenkiella parvula	HOM04D007051	ORTHO04D009177	9.3e-86	320.1	314	51.0
Carubv10014253m.g	Capsella rubella	HOM04D007051	ORTHO04D009177	3.7e-82	308.1	314	48.4
AL3G13930	Arabidopsis lyrata	HOM04D007051	ORTHO04D009177	1.8e-81	305.8	314	49.0
LOC_Os03g16870	Oryza sativa ssp. japonica	HOM04D007051	ORTHO04D009177	2.6e-80	302.0	314	49.7
Cpa.g.sc1.397	Carica papaya	HOM04D007051	ORTHO04D009177	1.7e-79	299.3	249	65.1
UGI.Scf00066.6132	Utricularia gibba	HOM04D007051	ORTHO04D009177	2.4e-78	295.4	312	50.0
Eucgr.J00020	Eucalyptus grandis	HOM04D007051	ORTHO04D009177	8.7e-76	287.0	240	58.8
Zm00001d028631	Zea mays	HOM04D007051	ORTHO04D009177	7.4e-75	283.9	308	47.4
Bv2_037580_kgso	Beta vulgaris	HOM04D007051	ORTHO04D009177	1.8e-68	262.7	246	56.1
Solyc06g043070.2	Solanum lycopersicum	HOM04D007051	ORTHO04D009177	1.3e-63	246.5	244	51.6
AT3G04020	Arabidopsis thaliana	HOM04D007051	ORTHO04D009177	1.2e-56	223.4	248	46.0
Glyma.02G092900	Glycine max	HOM04D007051	ORTHO04D009177	2.1e-45	186.0	313	39.3
Ca_21025.g	Cicer arietinum	HOM04D007051	ORTHO04D009177	3.6e-45	185.3	133	64.7
Pp3c12_11030	Physcomitrium patens	HOM04D007051	ORTHO04D009177	5.2e-44	181.4	299	34.1
AUR62041862	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	1.7e-42	176.4	115	70.4
Mapoly0002s0030	Marchantia polymorpha	HOM04D007051	ORTHO04D009177	9.1e-33	144.1	281	28.8
AUR62041861	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	6.8e-28	127.9	119	55.5
C.cajan_08197.g	Cajanus cajan	HOM04D007051	ORTHO04D009177	2.7e-24	115.9	128	52.3
Solyc06g043060.1	Solanum lycopersicum	HOM04D007051	ORTHO04D009177	2.5e-22	109.4	67	70.1
CAN.G1401.1	Capsicum annuum	HOM04D007051	ORTHO04D009177	1.2e-21	107.1	63	73.0
MDO.mRNA.g.706.21	Malus domestica	HOM04D007051	ORTHO04D009177	1.6e-21	106.7	58	89.7
Zm00001d048259	Zea mays	HOM04D007051	ORTHO04D009177	2.0e-19	99.8	123	40.7
Achn037351	Actinidia chinensis	HOM04D007051	ORTHO04D009177	1.2e-08	63.9	62	53.2
Achn037341	Actinidia chinensis	HOM04D007051	ORTHO04D032427	3.3e-06	55.8	68	44.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment