Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
PGSC0003DMG400011904	Solanum tuberosum	HOM04D001175	ORTHO04D015547	7.0e-48	192.6	98	100.0
Solyc09g098190.2	Solanum lycopersicum	HOM04D001175	ORTHO04D015547	2.8e-41	170.6	93	93.5
CAN.G710.36	Capsicum annuum	HOM04D001175	ORTHO04D001146	2.1e-28	127.9	93	69.9
Peaxi162Scf00286g00449	Petunia axillaris	HOM04D001175	ORTHO04D001146	1.9e-21	104.8	93	61.3
Solyc12g098670.1	Solanum lycopersicum	HOM04D001175	ORTHO04D001146	1.9e-21	104.8	100	58.0
PGSC0003DMG400004582	Solanum tuberosum	HOM04D001175	ORTHO04D001146	7.2e-21	102.8	100	57.0
Peaxi162Scf00378g00620	Petunia axillaris	HOM04D001175	ORTHO04D001146	1.5e-18	95.1	99	49.5
Cc03_g10520	Coffea canephora	HOM04D001175	ORTHO04D001146	5.6e-13	76.6	88	44.3
CAN.G2157.1	Capsicum annuum	HOM04D001175	ORTHO04D001146	1.0e-11	72.4	53	66.0
UGI.Scf00196.11204	Utricularia gibba	HOM04D001175	ORTHO04D001146	1.4e-11	72.0	85	47.1
UGI.Scf00040.4374	Utricularia gibba	HOM04D001175	ORTHO04D001146	1.4e-11	72.0	88	42.0
Cucsa.365670	Cucumis sativus L.	HOM04D001175	ORTHO04D001146	8.9e-11	69.3	80	45.0
Gorai.011G143700	Gossypium raimondii	HOM04D001175	ORTHO04D001146	8.9e-11	69.3	82	40.2
Achn379201	Actinidia chinensis	HOM04D001175	ORTHO04D015547	2.0e-10	68.2	89	36.0
MELO3C026131	Cucumis melo	HOM04D001175	ORTHO04D001146	7.5e-10	66.2	80	43.8
COL.COLO4_10186	Corchorus olitorius	HOM04D001175	ORTHO04D001146	7.5e-10	66.2	60	46.7
Cpa.g.sc50.134	Carica papaya	HOM04D001175	ORTHO04D001146	1.3e-09	65.5	61	50.8
Pbr031117.1.g	Pyrus bretschneideri	HOM04D001175	ORTHO04D001146	1.3e-09	65.5	61	52.5
TCA.TCM_020054	Theobroma cacao	HOM04D001175	ORTHO04D001146	1.3e-09	65.5	61	44.3
Potri.002G232200	Populus trichocarpa	HOM04D001175	ORTHO04D001146	1.7e-09	65.1	84	38.1
Gorai.005G128500	Gossypium raimondii	HOM04D001175	ORTHO04D001146	2.2e-09	64.7	61	42.6
Manes.11G113700	Manihot esculenta	HOM04D001175	ORTHO04D001146	3.7e-09	63.9	102	41.2
RCO.g.29888.000009	Ricinus communis	HOM04D001175	ORTHO04D001146	3.7e-09	63.9	96	35.4
Potri.014G150000	Populus trichocarpa	HOM04D001175	ORTHO04D001146	4.9e-09	63.5	82	35.4
THA.LOC104826187	Tarenaya hassleriana	HOM04D001175	ORTHO04D001146	4.9e-09	63.5	76	46.1
Bo8g005810	Brassica oleracea	HOM04D001175	ORTHO04D001146	4.9e-09	63.5	97	38.1
Migut.N00438	Erythranthe guttata	HOM04D001175	ORTHO04D001146	8.3e-09	62.8	94	35.1
Achn096011	Actinidia chinensis	HOM04D001175	ORTHO04D015547	1.9e-08	61.6	95	38.9
ATR0609G032	Amborella trichopoda	HOM04D001175	ORTHO04D001146	1.9e-08	61.6	60	50.0
GSVIVG01031676001	Vitis vinifera	HOM04D001175	ORTHO04D001146	2.4e-08	61.2	60	46.7
Prupe.1G180000	Prunus persica	HOM04D001175	ORTHO04D001146	2.4e-08	61.2	61	45.9
Eucgr.H02617	Eucalyptus grandis	HOM04D001175	ORTHO04D001146	3.2e-08	60.8	62	43.5
Brara.H02987	Brassica rapa	HOM04D001175	ORTHO04D001146	4.1e-08	60.5	97	37.1
AL1G15750	Arabidopsis lyrata	HOM04D001175	ORTHO04D001146	1.2e-07	58.9	94	31.9
DCAR_004092	Daucus carota	HOM04D001175	ORTHO04D001146	1.2e-07	58.9	83	37.3
ZJU.LOC107422166	Ziziphus jujuba	HOM04D001175	ORTHO04D001146	2.0e-07	58.2	61	44.3
LOC_Os11g24540	Oryza sativa ssp. japonica	HOM04D001175	ORTHO04D001146	2.7e-07	57.8	60	46.7
Tp1g04630	Schrenkiella parvula	HOM04D001175	ORTHO04D001146	4.6e-07	57.0	93	32.3
Ciclev10019670m.g	Citrus clementina	HOM04D001175	ORTHO04D001146	6.0e-07	56.6	58	44.8
FVE22468	Fragaria vesca	HOM04D002995	ORTHO04D003766	7.8e-07	56.2	61	39.3
Zm00001d004702	Zea mays	HOM04D001175	ORTHO04D001146	1.0e-06	55.8	60	45.0
AL4G41720	Arabidopsis lyrata	HOM04D001175	ORTHO04D001146	1.7e-06	55.1	76	35.5
AUR62036489	Chenopodium quinoa	HOM04D001175	ORTHO04D001146	2.3e-06	54.7	93	38.7
AUR62037086	Chenopodium quinoa	HOM04D001175	ORTHO04D001146	3.0e-06	54.3	93	37.6
C.cajan_19107.g	Cajanus cajan	HOM04D001175	ORTHO04D001146	3.0e-06	54.3	61	39.3
C.cajan_08016.g	Cajanus cajan	HOM04D001175	ORTHO04D001146	3.9e-06	53.9	86	29.1
AT1G05820	Arabidopsis thaliana	HOM04D001175	ORTHO04D001146	3.9e-06	53.9	94	30.9
Carubv10022926m.g	Capsella rubella	HOM04D001175	ORTHO04D001146	6.6e-06	53.1	60	38.3
Ca_14010.g	Cicer arietinum	HOM04D001175	ORTHO04D001146	8.6e-06	52.8	63	36.5
Tp4g25200	Schrenkiella parvula	HOM04D001175	ORTHO04D001146	8.6e-06	52.8	55	43.6
Vradi08g23290	Vigna radiata var. radiata	HOM04D001175	ORTHO04D001146	8.6e-06	52.8	60	35.0
Carubv10008828m.g	Capsella rubella	HOM04D001175	ORTHO04D001146	8.6e-06	52.8	96	31.2

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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