Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
NNU_05982	Nelumbo nucifera	HOM04D005317	ORTHO04D006520	6.3e-305	1048.9	526	100.0
NNU_08501	Nelumbo nucifera	HOM04D005317	ORTHO04D006520	1.1e-248	862.1	507	88.0
GSVIVG01021206001	Vitis vinifera	HOM04D005317	ORTHO04D006520	8.6e-169	596.7	532	58.1
Achn182431	Actinidia chinensis	HOM04D005317	ORTHO04D006520	3.9e-161	571.2	533	54.6
ZJU.LOC107411383	Ziziphus jujuba	HOM04D005317	ORTHO04D006520	2.9e-156	555.1	534	55.2
Cc02_g14860	Coffea canephora	HOM04D005317	ORTHO04D006520	1.0e-153	546.6	529	53.9
Manes.06G033800	Manihot esculenta	HOM04D005317	ORTHO04D006520	1.0e-153	546.6	528	52.3
HBR2890G018	Hevea brasiliensis	HOM04D005317	ORTHO04D006520	1.4e-150	536.2	525	51.6
RCO.g.30136.000002	Ricinus communis	HOM04D005317	ORTHO04D006520	2.3e-150	535.4	529	52.6
Cla019676.g	Citrullus lanatus	HOM04D005317	ORTHO04D006520	2.6e-149	531.9	531	52.7
Glyma.01G042900	Glycine max	HOM04D005317	ORTHO04D006520	1.7e-148	529.3	537	52.0
Prupe.4G060500	Prunus persica	HOM04D005317	ORTHO04D006520	4.9e-148	527.7	542	52.8
GSVIVG01026940001	Vitis vinifera	HOM04D005317	ORTHO04D006520	1.4e-147	526.2	536	53.2
Peaxi162Scf00753g00411	Petunia axillaris	HOM04D005317	ORTHO04D006520	9.2e-147	523.5	531	51.6
MELO3C002646	Cucumis melo	HOM04D005317	ORTHO04D006520	7.8e-146	520.4	532	51.5
PGSC0003DMG400004381	Solanum tuberosum	HOM04D005317	ORTHO04D006520	2.5e-144	515.4	529	50.9
CAN.G943.27	Capsicum annuum	HOM04D005317	ORTHO04D006520	5.6e-144	514.2	529	50.1
Ciclev10031207m.g	Citrus clementina	HOM04D005317	ORTHO04D006520	1.1e-142	510.0	528	50.9
Migut.H00865	Erythranthe guttata	HOM04D005317	ORTHO04D006520	1.1e-142	510.0	526	52.7
Vradi10g05260	Vigna radiata var. radiata	HOM04D005317	ORTHO04D006520	5.2e-142	507.7	533	50.7
Potri.004G084700	Populus trichocarpa	HOM04D005317	ORTHO04D006520	6.8e-142	507.3	530	50.0
Ca_08023.g	Cicer arietinum	HOM04D005317	ORTHO04D006520	3.5e-138	495.0	541	50.8
TCA.TCM_001990	Theobroma cacao	HOM04D005317	ORTHO04D006520	6.2e-135	484.2	528	50.0
DCAR_005225	Daucus carota	HOM04D005317	ORTHO04D006520	9.0e-134	480.3	540	47.8
UGI.Scf00232.12134	Utricularia gibba	HOM04D005317	ORTHO04D006520	9.0e-134	480.3	528	48.9
FVE21930	Fragaria vesca	HOM04D005317	ORTHO04D006520	3.4e-133	478.4	526	50.0
Medtr2g031410	Medicago truncatula	HOM04D005317	ORTHO04D006520	9.9e-133	476.9	540	48.0
Gorai.007G174700	Gossypium raimondii	HOM04D005317	ORTHO04D006520	4.9e-132	474.6	526	48.7
TPR.G22268	Trifolium pratense	HOM04D005317	ORTHO04D006520	1.1e-131	473.4	544	47.2
AUR62031197	Chenopodium quinoa	HOM04D005317	ORTHO04D006520	1.4e-131	473.0	534	48.1
Bv8_199970_wsoc	Beta vulgaris	HOM04D005317	ORTHO04D006520	1.2e-130	469.9	537	47.9
Cpa.g.sc7.51	Carica papaya	HOM04D005317	ORTHO04D006520	8.7e-129	463.8	535	44.9
AUR62036936	Chenopodium quinoa	HOM04D005317	ORTHO04D006520	8.7e-129	463.8	532	47.6
COL.COLO4_08893	Corchorus olitorius	HOM04D005317	ORTHO04D006520	2.5e-128	462.2	526	49.8
AH014823	Amaranthus hypochondriacus	HOM04D005317	ORTHO04D006520	2.4e-126	455.7	543	45.7
AUR62027671	Chenopodium quinoa	HOM04D005317	ORTHO04D006520	9.0e-126	453.8	526	47.3
AT4G35540	Arabidopsis thaliana	HOM04D005317	ORTHO04D006520	3.4e-117	425.2	536	43.3
Cucsa.213200	Cucumis sativus L.	HOM04D005317	ORTHO04D006520	4.2e-115	418.3	454	50.4
AL7G15620	Arabidopsis lyrata	HOM04D005317	ORTHO04D006520	6.7e-113	411.0	539	42.9
Pbr000483.1.g	Pyrus bretschneideri	HOM04D005317	ORTHO04D006520	1.3e-111	406.8	452	51.5
THA.LOC104826474	Tarenaya hassleriana	HOM04D005317	ORTHO04D006520	2.1e-111	406.0	549	42.4
Vradi11g10610	Vigna radiata var. radiata	HOM04D005317	ORTHO04D006520	8.2e-111	404.1	533	43.3
THA.LOC104827541	Tarenaya hassleriana	HOM04D005317	ORTHO04D006520	2.4e-110	402.5	550	42.7
Tp7g33320	Schrenkiella parvula	HOM04D005317	ORTHO04D006520	3.1e-110	402.1	529	42.2
Glyma.04G157100	Glycine max	HOM04D005317	ORTHO04D006520	1.9e-107	392.9	537	43.2
Carubv10007416m.g	Capsella rubella	HOM04D005317	ORTHO04D006520	3.2e-107	392.1	568	41.2
ATR0794G026	Amborella trichopoda	HOM04D005317	ORTHO04D006520	2.6e-101	372.5	579	39.4
Bo1g006380	Brassica oleracea	HOM04D005317	ORTHO04D006520	7.9e-98	360.9	510	40.2
DCAR_030917	Daucus carota	HOM04D005317	ORTHO04D006520	1.4e-94	350.1	471	42.5
Migut.M01042	Erythranthe guttata	HOM04D005317	ORTHO04D006520	3.1e-86	322.4	491	40.7
LOC_Os08g42020	Oryza sativa ssp. japonica	HOM04D005317	ORTHO04D006520	9.8e-72	274.2	563	33.0
MDO.mRNA.g.222.80	Malus domestica	HOM04D005317	ORTHO04D006520	1.9e-67	260.0	371	44.7
Pp3c3_11130	Physcomitrium patens	HOM04D005317	ORTHO04D006520	2.3e-65	253.1	537	33.0
Bo3g155570	Brassica oleracea	HOM04D005317	ORTHO04D006520	1.4e-57	227.3	493	32.7
Mapoly0022s0109	Marchantia polymorpha	HOM04D005317	ORTHO04D006520	2.2e-55	219.9	561	29.4
Zm00001d049832	Zea mays	HOM04D005317	ORTHO04D006520	1.5e-51	207.2	481	31.2
Vradi0100s00450	Vigna radiata var. radiata	HOM04D005317	ORTHO04D006520	2.5e-51	206.5	215	52.6
SMO137G0058	Selaginella moellendorffii	HOM04D005317	ORTHO04D006520	1.6e-42	177.2	515	28.3
RCO.g.27747.000005	Ricinus communis	HOM04D005317	ORTHO04D006520	5.2e-41	172.2	176	53.4
MDO.mRNA.g.222.81	Malus domestica	HOM04D005317	ORTHO04D006520	9.2e-30	134.8	124	49.2
Achn125001	Actinidia chinensis	HOM04D005317	ORTHO04D006520	2.7e-21	106.7	82	56.1
PAB00006750	Picea abies	HOM04D005317	ORTHO04D006520	4.3e-19	99.4	204	34.3
Solyc05g023840.1	Solanum lycopersicum	HOM04D005317	ORTHO04D006520	1.3e-15	87.8	119	39.5
PAB00045520	Picea abies	HOM04D005317	ORTHO04D006520	8.4e-15	85.1	90	46.7
FVE29653	Fragaria vesca	HOM04D010400	ORTHO04D011294	2.3e-12	77.0	98	35.7
MCO04G551	Micromonas commoda	HOM04D005317	ORTHO04D006520	1.9e-11	73.9	203	25.6
MDO.mRNA.g.2906.9	Malus domestica	HOM04D005317	ORTHO04D006520	4.0e-09	66.2	131	35.9
TPR.G39999	Trifolium pratense	HOM04D005317	ORTHO04D006520	1.2e-08	64.7	61	42.6
ATR0794G076	Amborella trichopoda	HOM04D005317	ORTHO04D006520	1.7e-07	60.8	65	43.1
FVE29654	Fragaria vesca	HOM04D005317	ORTHO04D006520	2.9e-07	60.1	55	54.5
ATR0582G311	Amborella trichopoda	HOM04D005317	ORTHO04D006520	1.1e-06	58.2	48	50.0
MCO16G125	Micromonas commoda	HOM04D002705	ORTHO04D003626	1.4e-06	57.8	246	24.0
Cpa.g.sc84.29	Carica papaya	HOM04D001523	ORTHO04D001666	5.5e-06	55.8	286	22.4

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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