Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Medtr1g018130	Medicago truncatula	HOM04D008527	ORTHO04D002436	2.6e-159	564.3	287	100.0
Ca_16728.g	Cicer arietinum	HOM04D008527	ORTHO04D002436	7.5e-18	94.4	162	38.9
Ca_16731.g	Cicer arietinum	HOM04D008527	ORTHO04D002436	7.5e-18	94.4	162	38.9
TPR.G12635	Trifolium pratense	HOM04D008527	ORTHO04D002436	7.5e-18	94.4	143	41.3
TPR.G12588	Trifolium pratense	HOM04D000045	ORTHO04D002436	4.1e-16	88.6	142	39.4
TPR.G12614	Trifolium pratense	HOM04D008527	ORTHO04D002436	7.1e-16	87.8	145	37.9
Medtr4g062290	Medicago truncatula	HOM04D008527	ORTHO04D002436	9.2e-16	87.4	143	38.5
C.cajan_28932.g	Cajanus cajan	HOM04D005214	ORTHO04D006442	3.9e-14	82.0	69	63.8
TPR.G14498	Trifolium pratense	HOM04D008527	ORTHO04D002436	3.3e-13	79.0	160	35.0
TPR.G11233	Trifolium pratense	HOM04D008527	ORTHO04D002436	5.6e-13	78.2	160	36.9
Glyma.17G235800	Glycine max	HOM04D005214	ORTHO04D006442	9.5e-13	77.4	73	58.9
TPR.G30777	Trifolium pratense	HOM04D008527	ORTHO04D002436	6.8e-11	71.2	140	32.9
TPR.G14508	Trifolium pratense	HOM04D008527	ORTHO04D002436	8.9e-11	70.9	62	54.8
TPR.G21506	Trifolium pratense	HOM04D008527	ORTHO04D002436	2.0e-10	69.7	66	50.0
Medtr1g055290	Medicago truncatula	HOM04D008527	ORTHO04D002436	2.0e-10	69.7	160	34.4
TPR.G36147	Trifolium pratense	HOM04D008527	ORTHO04D002436	2.0e-10	69.7	66	50.0
Medtr5g081820	Medicago truncatula	HOM04D008527	ORTHO04D002436	4.4e-10	68.6	176	31.8
TPR.G36461	Trifolium pratense	HOM04D008527	ORTHO04D002436	9.9e-10	67.4	126	34.9
Medtr5g081840	Medicago truncatula	HOM04D008527	ORTHO04D002436	2.9e-09	65.9	162	32.7
TPR.G22347	Trifolium pratense	HOM04D008527	ORTHO04D002436	1.1e-08	63.9	158	30.4
TPR.G30770	Trifolium pratense	HOM04D008527	ORTHO04D002436	1.1e-08	63.9	154	31.2
Medtr1g058550	Medicago truncatula	HOM04D008527	ORTHO04D002436	3.2e-08	62.4	144	32.6
Medtr1g054800	Medicago truncatula	HOM04D008527	ORTHO04D002436	5.4e-08	61.6	146	32.2
COL.COLO4_38300	Corchorus olitorius	HOM04D005214	ORTHO04D006442	5.4e-08	61.6	67	56.7
Medtr6g038010	Medicago truncatula	HOM04D007722	ORTHO04D002436	1.6e-07	60.1	141	31.2
C.cajan_26682.g	Cajanus cajan	HOM04D005214	ORTHO04D006442	2.1e-07	59.7	66	48.5
Potri.004G131200	Populus trichocarpa	HOM04D005214	ORTHO04D006442	6.0e-07	58.2	69	53.6
TPR.G30772	Trifolium pratense	HOM04D008527	ORTHO04D002436	6.0e-07	58.2	140	32.1
TPR.G4919	Trifolium pratense	HOM04D005214	ORTHO04D006442	1.3e-06	57.0	71	47.9
Medtr1g054740	Medicago truncatula	HOM04D008527	ORTHO04D002436	3.9e-06	55.5	153	32.0
C.cajan_20173.g	Cajanus cajan	HOM04D000004	ORTHO04D000241	3.9e-06	55.5	51	51.0
C.cajan_38257.g	Cajanus cajan	HOM04D000454	ORTHO04D000241	3.9e-06	55.5	51	51.0
Medtr4g094635	Medicago truncatula	HOM04D005214	ORTHO04D006442	5.1e-06	55.1	69	52.2
Gorai.009G156500	Gossypium raimondii	HOM04D005214	ORTHO04D006442	6.6e-06	54.7	64	53.1
Gorai.010G239100	Gossypium raimondii	HOM04D005214	ORTHO04D006442	6.6e-06	54.7	67	55.2
TPR.G9011	Trifolium pratense	HOM04D007722	ORTHO04D002436	6.6e-06	54.7	143	28.0
Medtr4g094630	Medicago truncatula	HOM04D005214	ORTHO04D006442	6.6e-06	54.7	70	50.0
C.cajan_29578.g	Cajanus cajan	HOM04D000454	ORTHO04D000241	8.7e-06	54.3	50	48.0

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment