Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
MDO.mRNA.g.879.13	Malus domestica	HOM04D002321	ORTHO04D002274	1.3e-68	261.9	132	100.0
Pbr038314.1.g	Pyrus bretschneideri	HOM04D002321	ORTHO04D002274	5.7e-29	130.2	95	72.6
Pbr017416.1.g	Pyrus bretschneideri	HOM04D002321	ORTHO04D002274	4.8e-28	127.1	95	72.6
MELO3C016696	Cucumis melo	HOM04D002321	ORTHO04D002274	4.1e-27	124.0	83	72.3
Cucsa.123120	Cucumis sativus L.	HOM04D002321	ORTHO04D002274	2.0e-26	121.7	82	72.0
Cla023382.g	Citrullus lanatus	HOM04D002321	ORTHO04D002274	2.0e-26	121.7	82	72.0
ZJU.LOC107422439	Ziziphus jujuba	HOM04D002321	ORTHO04D002274	1.9e-24	115.2	82	69.5
Prupe.4G180600	Prunus persica	HOM04D002321	ORTHO04D002274	1.2e-23	112.5	64	89.1
Vradi02g10350	Vigna radiata var. radiata	HOM04D002321	ORTHO04D002274	2.7e-23	111.3	124	46.0
C.cajan_30103.g	Cajanus cajan	HOM04D002321	ORTHO04D002274	3.6e-23	110.9	82	65.9
MELO3C024939	Cucumis melo	HOM04D002321	ORTHO04D002274	3.6e-23	110.9	74	70.3
MDO.mRNA.g.134.12	Malus domestica	HOM04D002321	ORTHO04D002274	3.0e-22	107.8	56	92.9
Araip.FZ182	Arachis ipaensis	HOM04D002321	ORTHO04D002274	6.8e-22	106.7	82	61.0
C.cajan_13857.g	Cajanus cajan	HOM04D002321	ORTHO04D002274	2.6e-21	104.8	82	65.9
Medtr2g085330	Medicago truncatula	HOM04D002321	ORTHO04D002274	2.6e-21	104.8	82	63.4
Glyma.13G276500	Glycine max	HOM04D002321	ORTHO04D002274	3.4e-21	104.4	82	64.6
Eucgr.F03313	Eucalyptus grandis	HOM04D002321	ORTHO04D002274	3.4e-21	104.4	82	62.2
TPR.G39006	Trifolium pratense	HOM04D002321	ORTHO04D002274	4.4e-21	104.0	124	46.8
Ca_06863.g	Cicer arietinum	HOM04D002321	ORTHO04D002274	5.7e-21	103.6	82	64.6
Glyma.12G224800	Glycine max	HOM04D002321	ORTHO04D002274	7.5e-21	103.2	82	64.6
Glyma.06G240500	Glycine max	HOM04D002321	ORTHO04D002274	1.3e-20	102.4	82	61.0
Araip.V1CQ7	Arachis ipaensis	HOM04D002321	ORTHO04D002274	2.8e-20	101.3	82	64.6
TCA.TCM_031520	Theobroma cacao	HOM04D002321	ORTHO04D002274	1.8e-19	98.6	107	48.6
Potri.001G399400	Populus trichocarpa	HOM04D002321	ORTHO04D002274	9.1e-19	96.3	82	57.3
Eucgr.F01145	Eucalyptus grandis	HOM04D002321	ORTHO04D002274	1.2e-18	95.9	82	54.9
Potri.011G119700	Populus trichocarpa	HOM04D002321	ORTHO04D002274	1.6e-18	95.5	86	55.8
GSVIVG01014330001	Vitis vinifera	HOM04D002321	ORTHO04D002274	3.5e-18	94.4	84	53.6
THA.LOC104813390	Tarenaya hassleriana	HOM04D002321	ORTHO04D002274	4.5e-18	94.0	124	41.9
Medtr4g132200	Medicago truncatula	HOM04D002321	ORTHO04D002274	5.9e-18	93.6	82	57.3
MDO.mRNA.g.134.11	Malus domestica	HOM04D002321	ORTHO04D002274	5.9e-18	93.6	96	52.1
DCAR_020991	Daucus carota	HOM04D002321	ORTHO04D002274	1.3e-17	92.4	83	54.2
Gorai.002G069700	Gossypium raimondii	HOM04D002321	ORTHO04D002274	2.3e-17	91.7	104	45.2
COL.COLO4_27176	Corchorus olitorius	HOM04D002321	ORTHO04D002274	1.1e-16	89.4	106	44.3
Ciclev10008004m.g	Citrus clementina	HOM04D002321	ORTHO04D002274	1.5e-16	89.0	81	51.9
NNU_25978	Nelumbo nucifera	HOM04D002321	ORTHO04D002274	1.9e-16	88.6	84	56.0
Gorai.009G387800	Gossypium raimondii	HOM04D002321	ORTHO04D002274	1.9e-16	88.6	104	43.3
HBR1975G006	Hevea brasiliensis	HOM04D002321	ORTHO04D002274	2.5e-16	88.2	82	56.1
NNU_11130	Nelumbo nucifera	HOM04D002321	ORTHO04D002274	5.5e-16	87.0	84	54.8
Achn163511	Actinidia chinensis	HOM04D002321	ORTHO04D002274	1.2e-15	85.9	84	52.4
CAN.G162.54	Capsicum annuum	HOM04D002321	ORTHO04D002274	1.6e-15	85.5	84	53.6
Carubv10004404m.g	Capsella rubella	HOM04D002321	ORTHO04D002274	1.6e-15	85.5	114	40.4
Achn133511	Actinidia chinensis	HOM04D002321	ORTHO04D002274	1.6e-15	85.5	84	52.4
Brara.A01720	Brassica rapa	HOM04D002321	ORTHO04D002274	2.1e-15	85.1	111	42.3
Migut.M00803	Erythranthe guttata	HOM04D002321	ORTHO04D002274	4.7e-15	84.0	86	48.8
Cpa.g.sc80.67	Carica papaya	HOM04D002321	ORTHO04D002274	4.7e-15	84.0	82	54.9
Solyc12g013860.1	Solanum lycopersicum	HOM04D002321	ORTHO04D002274	4.7e-15	84.0	115	40.9
Brara.K00084	Brassica rapa	HOM04D002321	ORTHO04D002274	6.1e-15	83.6	111	41.4
Gorai.009G386800	Gossypium raimondii	HOM04D002321	ORTHO04D002274	6.1e-15	83.6	104	41.3
Tp6g15880	Schrenkiella parvula	HOM04D002321	ORTHO04D002274	8.0e-15	83.2	95	43.2
Solyc07g063100.2	Solanum lycopersicum	HOM04D002321	ORTHO04D002274	1.4e-14	82.4	97	48.5
FVE17153	Fragaria vesca	HOM04D002321	ORTHO04D002274	1.4e-14	82.4	61	70.5
Bo7g111460	Brassica oleracea	HOM04D002321	ORTHO04D002274	1.4e-14	82.4	111	40.5
Peaxi162Scf00069g01513	Petunia axillaris	HOM04D002321	ORTHO04D002274	1.8e-14	82.0	97	48.5
PGSC0003DMG400012445	Solanum tuberosum	HOM04D002321	ORTHO04D002274	6.8e-14	80.1	97	47.4
Bo8g052840	Brassica oleracea	HOM04D002321	ORTHO04D002274	8.8e-14	79.7	108	39.8
Manes.03G109600	Manihot esculenta	HOM04D002321	ORTHO04D002274	1.2e-13	79.3	63	63.5
AH008061	Amaranthus hypochondriacus	HOM04D002321	ORTHO04D002274	1.5e-13	79.0	83	48.2
AL7G25270	Arabidopsis lyrata	HOM04D002321	ORTHO04D002274	2.6e-13	78.2	114	39.5
Migut.H01943	Erythranthe guttata	HOM04D002321	ORTHO04D002274	2.6e-13	78.2	82	47.6
Gorai.013G168900	Gossypium raimondii	HOM04D002321	ORTHO04D002274	2.6e-13	78.2	63	60.3
AT4G27500	Arabidopsis thaliana	HOM04D002321	ORTHO04D002274	5.7e-13	77.0	72	54.2
Bv7_177500_nztn	Beta vulgaris	HOM04D002321	ORTHO04D002274	5.7e-13	77.0	82	42.7
Bv4_086950_oaki	Beta vulgaris	HOM04D002321	ORTHO04D002274	5.7e-13	77.0	82	42.7
HBR1344G020	Hevea brasiliensis	HOM04D002321	ORTHO04D002274	5.7e-13	77.0	63	61.9
Zm00001d005636	Zea mays	HOM04D002321	ORTHO04D002274	9.8e-13	76.3	84	47.6
Zm00001d020175	Zea mays	HOM04D002321	ORTHO04D002274	9.8e-13	76.3	84	47.6
HBR2357G001	Hevea brasiliensis	HOM04D002321	ORTHO04D002274	1.3e-12	75.9	63	60.3
RCO.g.28469.000004	Ricinus communis	HOM04D002321	ORTHO04D002274	1.3e-12	75.9	65	58.5
PAB00006032	Picea abies	HOM04D002321	ORTHO04D002274	2.2e-12	75.1	83	47.0
Manes.15G087400	Manihot esculenta	HOM04D002321	ORTHO04D002274	6.3e-12	73.6	63	57.1
Tp7g25440	Schrenkiella parvula	HOM04D002321	ORTHO04D002274	1.1e-11	72.8	71	50.7
Peaxi162Scf00000g03512	Petunia axillaris	HOM04D002321	ORTHO04D002274	1.4e-11	72.4	64	56.2
THA.LOC104811864	Tarenaya hassleriana	HOM04D002321	ORTHO04D002274	1.8e-11	72.0	136	33.8
CAN.G213.8	Capsicum annuum	HOM04D002321	ORTHO04D002274	3.1e-11	71.2	97	43.3
LOC_Os08g30060	Oryza sativa ssp. japonica	HOM04D002321	ORTHO04D002274	3.1e-11	71.2	84	45.2
UGI.Scf00438.15893	Utricularia gibba	HOM04D002321	ORTHO04D002274	5.4e-11	70.5	66	56.1
Bo1g049430	Brassica oleracea	HOM04D002321	ORTHO04D002274	1.2e-10	69.3	60	58.3
AH010060	Amaranthus hypochondriacus	HOM04D002321	ORTHO04D002274	4.5e-10	67.4	67	47.8
DCAR_019557	Daucus carota	HOM04D002321	ORTHO04D002274	1.5e-08	62.4	56	57.1
THA.LOC104818081	Tarenaya hassleriana	HOM04D002321	ORTHO04D002274	3.3e-08	61.2	85	42.4
Cc05_g11980	Coffea canephora	HOM04D002321	ORTHO04D002274	9.5e-08	59.7	50	60.0
Cc00_g07940	Coffea canephora	HOM04D002321	ORTHO04D002274	2.8e-07	58.2	67	46.3
Gorai.009G386100	Gossypium raimondii	HOM04D002321	ORTHO04D002274	2.3e-06	55.1	82	40.2
AUR62039203	Chenopodium quinoa	HOM04D002321	ORTHO04D002274	2.3e-06	55.1	53	49.1
Brara.H01513	Brassica rapa	HOM04D002321	ORTHO04D002274	3.0e-06	54.7	66	42.4
AUR62019432	Chenopodium quinoa	HOM04D002321	ORTHO04D002274	3.0e-06	54.7	53	49.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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