Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
MDO.mRNA.g.3684.13	Malus domestica	HOM04D003639	ORTHO04D003345	2.7e-86	320.9	157	100.0
Pbr018275.1.g	Pyrus bretschneideri	HOM04D003639	ORTHO04D003345	1.3e-51	205.7	170	67.6
Pbr011022.1.g	Pyrus bretschneideri	HOM04D003639	ORTHO04D003345	1.4e-45	185.7	171	63.2
Prupe.5G094800	Prunus persica	HOM04D003639	ORTHO04D003345	5.9e-33	143.7	169	50.9
MDO.mRNA.g.408.3	Malus domestica	HOM04D003639	ORTHO04D003345	3.6e-30	134.4	132	56.8
FVE32426	Fragaria vesca	HOM04D003639	ORTHO04D003345	6.8e-29	130.2	168	48.2
Cucsa.302890	Cucumis sativus L.	HOM04D003639	ORTHO04D003345	8.0e-22	106.7	163	42.3
Cla011473.g	Citrullus lanatus	HOM04D003639	ORTHO04D003345	1.8e-21	105.5	139	46.0
ZJU.LOC107429953	Ziziphus jujuba	HOM04D003639	ORTHO04D003345	1.3e-19	99.4	167	37.7
TCA.TCM_016211	Theobroma cacao	HOM04D003639	ORTHO04D003345	2.9e-19	98.2	144	39.6
Gorai.007G022700	Gossypium raimondii	HOM04D003639	ORTHO04D003345	1.2e-17	92.8	182	34.1
AUR62010600	Chenopodium quinoa	HOM04D003639	ORTHO04D003345	3.3e-15	84.7	170	37.1
COL.COLO4_34422	Corchorus olitorius	HOM04D003639	ORTHO04D003345	9.5e-15	83.2	161	32.3
Manes.02G024900	Manihot esculenta	HOM04D003639	ORTHO04D003345	1.2e-14	82.8	141	39.0
HBR0306G032	Hevea brasiliensis	HOM04D003639	ORTHO04D003345	2.1e-14	82.0	156	37.2
Achn132491	Actinidia chinensis	HOM04D003639	ORTHO04D003345	1.8e-13	79.0	161	34.8
DCAR_008413	Daucus carota	HOM04D003639	ORTHO04D003345	8.9e-13	76.6	167	31.1
AH018660	Amaranthus hypochondriacus	HOM04D003639	ORTHO04D003345	1.5e-12	75.9	159	34.6
Medtr8g096930	Medicago truncatula	HOM04D003639	ORTHO04D003345	4.4e-12	74.3	82	46.3
C.cajan_11506.g	Cajanus cajan	HOM04D003639	ORTHO04D003345	1.3e-11	72.8	63	57.1
Ciclev10018609m.g	Citrus clementina	HOM04D003639	ORTHO04D003345	1.7e-11	72.4	83	44.6
Glyma.05G205100	Glycine max	HOM04D003639	ORTHO04D003345	2.2e-11	72.0	63	55.6
Bv5_100710_wcar	Beta vulgaris	HOM04D003639	ORTHO04D003345	2.9e-11	71.6	168	33.3
Glyma.08G012000	Glycine max	HOM04D003639	ORTHO04D003345	3.7e-11	71.2	63	55.6
Peaxi162Scf00714g00124	Petunia axillaris	HOM04D017422	ORTHO04D019193	6.4e-11	70.5	72	54.2
Vradi07g30270	Vigna radiata var. radiata	HOM04D003639	ORTHO04D003345	1.1e-10	69.7	71	52.1
TPR.G12816	Trifolium pratense	HOM04D003639	ORTHO04D003345	1.1e-10	69.7	63	55.6
Solyc08g080690.2	Solanum lycopersicum	HOM04D017422	ORTHO04D019193	1.1e-10	69.7	57	59.6
Achn002451	Actinidia chinensis	HOM04D003639	ORTHO04D003345	1.9e-10	68.9	154	31.8
RCO.g.30190.000403	Ricinus communis	HOM04D003639	ORTHO04D003345	9.2e-10	66.6	63	52.4
CAN.G859.7	Capsicum annuum	HOM04D017422	ORTHO04D019193	9.2e-10	66.6	63	52.4
Araip.FB0AM	Arachis ipaensis	HOM04D003639	ORTHO04D003345	2.1e-09	65.5	80	47.5
Ca_05721.g	Cicer arietinum	HOM04D003639	ORTHO04D003345	3.5e-09	64.7	63	50.8
AUR62017242	Chenopodium quinoa	HOM04D003639	ORTHO04D003345	3.5e-09	64.7	156	32.1
NNU_21049	Nelumbo nucifera	HOM04D003639	ORTHO04D003345	3.5e-09	64.7	74	48.6
AH003160	Amaranthus hypochondriacus	HOM04D003639	ORTHO04D003345	3.5e-09	64.7	88	37.5
Cc08_g14270	Coffea canephora	HOM04D003639	ORTHO04D003345	6.0e-09	63.9	148	31.8
NNU_08756	Nelumbo nucifera	HOM04D003639	ORTHO04D003345	6.0e-09	63.9	70	42.9
Cc02_g03140	Coffea canephora	HOM04D003639	ORTHO04D003345	1.5e-07	59.3	53	56.6
PGSC0003DMG400014327	Solanum tuberosum	HOM04D003639	ORTHO04D003345	5.6e-07	57.4	81	44.4
ATR0680G240	Amborella trichopoda	HOM04D003639	ORTHO04D003837	1.2e-06	56.2	181	26.0
CAN.G1704.2	Capsicum annuum	HOM04D003639	ORTHO04D003345	1.6e-06	55.8	134	31.3
ZJU.LOC107414453	Ziziphus jujuba	HOM04D003639	ORTHO04D003345	2.8e-06	55.1	120	27.5
C.cajan_38494.g	Cajanus cajan	HOM04D003639	ORTHO04D003345	3.6e-06	54.7	134	33.6
Vradi11g02290	Vigna radiata var. radiata	HOM04D003639	ORTHO04D003345	4.7e-06	54.3	48	56.2
Araip.64HDA	Arachis ipaensis	HOM04D003639	ORTHO04D003345	6.2e-06	53.9	92	37.0
Migut.N02470	Erythranthe guttata	HOM04D005844	ORTHO04D003837	6.2e-06	53.9	78	41.0
Vradi01g14540	Vigna radiata var. radiata	HOM04D003639	ORTHO04D003345	8.1e-06	53.5	131	32.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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