Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
MDO.mRNA.g.2330.13	Malus domestica	HOM04D006988	ORTHO04D147352	4.1e-57	223.8	143	100.0
Pbr019748.1.g	Pyrus bretschneideri	HOM04D006988	ORTHO04D008607	2.7e-16	88.2	122	51.6
Pbr021964.1.g	Pyrus bretschneideri	HOM04D006988	ORTHO04D008607	8.1e-13	76.6	125	44.8
Pbr021965.1.g	Pyrus bretschneideri	HOM04D006988	ORTHO04D008607	1.1e-12	76.3	126	44.4
Prupe.1G423100	Prunus persica	HOM04D006988	ORTHO04D008607	2.2e-10	68.6	126	44.4
FVE02570	Fragaria vesca	HOM04D006988	ORTHO04D008607	2.1e-08	62.0	128	43.8
Gorai.009G219800	Gossypium raimondii	HOM04D006988	ORTHO04D008607	8.7e-07	56.6	124	38.7
COL.COLO4_28509	Corchorus olitorius	HOM04D006988	ORTHO04D008607	8.7e-07	56.6	125	40.8
Manes.18G046400	Manihot esculenta	HOM04D006988	ORTHO04D008607	2.5e-06	55.1	137	37.2
Achn299391	Actinidia chinensis	HOM04D006988	ORTHO04D008607	3.3e-06	54.7	145	33.8
TCA.TCM_034701	Theobroma cacao	HOM04D006988	ORTHO04D008607	7.4e-06	53.5	124	39.5
Eucgr.F00082	Eucalyptus grandis	HOM04D006988	ORTHO04D008607	7.4e-06	53.5	127	35.4
ZJU.LOC107433689	Ziziphus jujuba	HOM04D006988	ORTHO04D008607	7.4e-06	53.5	145	31.7
Cc10_g05770	Coffea canephora	HOM04D006988	ORTHO04D008607	9.6e-06	53.1	142	33.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment