Interactive Phylogenetics Module

Gene Id
LOC_Os10g40130

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os10g40130 Oryza sativa ssp. japonica HOM04D005814 ORTHO04D008145 0.0e+00 1364.7 758 100.0
Zm00001d047128 Zea mays HOM04D005814 ORTHO04D008145 0.0e+00 1087.0 770 81.7
Ciclev10018956m.g Citrus clementina HOM04D005814 ORTHO04D008145 2.1e-232 808.5 720 60.6
COL.COLO4_34475 Corchorus olitorius HOM04D005814 ORTHO04D008145 1.0e-231 806.2 720 60.1
Eucgr.D01840 Eucalyptus grandis HOM04D005814 ORTHO04D008145 5.1e-231 803.9 715 60.0
Potri.001G103300 Populus trichocarpa HOM04D005814 ORTHO04D008145 8.7e-231 803.1 707 60.4
Peaxi162Scf00119g01015 Petunia axillaris HOM04D005814 ORTHO04D008145 8.7e-231 803.1 726 58.7
NNU_16311 Nelumbo nucifera HOM04D005814 ORTHO04D008145 3.3e-230 801.2 714 59.5
Prupe.5G101100 Prunus persica HOM04D005814 ORTHO04D008145 4.3e-230 800.8 710 60.0
FVE32500 Fragaria vesca HOM04D005814 ORTHO04D008145 2.1e-229 798.5 707 60.0
Gorai.008G247200 Gossypium raimondii HOM04D005814 ORTHO04D008145 4.8e-229 797.3 718 59.9
Migut.E01089 Erythranthe guttata HOM04D005814 ORTHO04D008145 9.0e-228 793.1 716 58.1
RCO.g.30190.000462 Ricinus communis HOM04D005814 ORTHO04D008145 1.2e-227 792.7 716 60.8
TCA.TCM_016268 Theobroma cacao HOM04D005814 ORTHO04D008145 4.5e-227 790.8 718 59.9
Cc08_g14820 Coffea canephora HOM04D005814 ORTHO04D008145 7.6e-227 790.0 707 58.7
CAN.G774.53 Capsicum annuum HOM04D005814 ORTHO04D008145 3.8e-226 787.7 707 60.5
PGSC0003DMG402012338 Solanum tuberosum HOM04D005814 ORTHO04D008145 4.9e-226 787.3 708 60.0
Solyc08g081170.2 Solanum lycopersicum HOM04D005814 ORTHO04D008145 1.6e-224 782.3 717 59.7
Glyma.05G208600 Glycine max HOM04D005814 ORTHO04D008145 1.1e-222 776.2 715 58.2
ZJU.LOC107429847 Ziziphus jujuba HOM04D005814 ORTHO04D008145 2.5e-222 775.0 712 57.7
DCAR_000617 Daucus carota HOM04D005814 ORTHO04D008145 2.5e-222 775.0 712 59.4
Cla011439.g Citrullus lanatus HOM04D005814 ORTHO04D008145 4.3e-222 774.2 704 58.9
Bo9g029280 Brassica oleracea HOM04D005814 ORTHO04D008145 4.3e-222 774.2 709 59.8
Glyma.08G015200 Glycine max HOM04D005814 ORTHO04D008145 5.7e-222 773.9 707 58.6
Ca_05753.g Cicer arietinum HOM04D005814 ORTHO04D008145 7.4e-222 773.5 710 59.0
Cucsa.303230 Cucumis sativus L. HOM04D005814 ORTHO04D008145 1.3e-221 772.7 713 58.9
Brara.I01248 Brassica rapa HOM04D005814 ORTHO04D008145 1.4e-220 769.2 710 59.7
Vradi07g30640 Vigna radiata var. radiata HOM04D005814 ORTHO04D008145 1.4e-220 769.2 707 60.4
Pbr041340.1.g Pyrus bretschneideri HOM04D005814 ORTHO04D008145 1.2e-219 766.1 709 58.5
MELO3C005683 Cucumis melo HOM04D005814 ORTHO04D008145 2.6e-219 765.0 707 59.4
Bv6_137540_ixie Beta vulgaris HOM04D005814 ORTHO04D008145 4.5e-219 764.2 727 58.7
AUR62003173 Chenopodium quinoa HOM04D005814 ORTHO04D008145 1.7e-218 762.3 716 57.4
ATR0680G162 Amborella trichopoda HOM04D005814 ORTHO04D008145 2.2e-218 761.9 710 56.3
TPR.G12960 Trifolium pratense HOM04D005814 ORTHO04D008145 3.8e-218 761.1 713 58.1
Medtr8g098345 Medicago truncatula HOM04D005814 ORTHO04D008145 2.5e-217 758.4 696 59.3
AH016153 Amaranthus hypochondriacus HOM04D005814 ORTHO04D008145 7.1e-217 756.9 737 56.2
Cpa.g.sc74.56 Carica papaya HOM04D005814 ORTHO04D008145 7.1e-217 756.9 705 58.2
Pbr018176.1.g Pyrus bretschneideri HOM04D005814 ORTHO04D008145 1.2e-216 756.1 721 57.3
Tp2g00970 Schrenkiella parvula HOM04D005814 ORTHO04D008145 1.6e-216 755.7 713 58.2
Carubv10021912m.g Capsella rubella HOM04D005814 ORTHO04D008145 7.9e-216 753.4 712 58.6
AT1G63680 Arabidopsis thaliana HOM04D005814 ORTHO04D008145 1.3e-215 752.7 712 58.4
Manes.02G019800 Manihot esculenta HOM04D005814 ORTHO04D008145 3.0e-215 751.5 710 57.3
AL2G11550 Arabidopsis lyrata HOM04D005814 ORTHO04D008145 3.0e-215 751.5 712 58.1
THA.LOC104823588 Tarenaya hassleriana HOM04D005814 ORTHO04D008145 3.0e-215 751.5 722 57.8
AUR62007990 Chenopodium quinoa HOM04D005814 ORTHO04D008145 2.4e-212 741.9 706 56.9
Araip.L03GB Arachis ipaensis HOM04D005814 ORTHO04D008145 8.5e-210 733.4 704 56.0
C.cajan_11549.g Cajanus cajan HOM04D005814 ORTHO04D008145 5.1e-207 724.2 698 56.3
HBR2687G027 Hevea brasiliensis HOM04D005814 ORTHO04D008145 1.3e-205 719.5 713 56.0
UGI.Scf00001.312 Utricularia gibba HOM04D005814 ORTHO04D008145 1.0e-202 709.9 708 55.6
Achn244211 Actinidia chinensis HOM04D005814 ORTHO04D008145 3.8e-202 708.0 519 67.2
Pp3c24_18820 Physcomitrium patens HOM04D005814 ORTHO04D008145 5.4e-180 634.4 651 53.0
Gorai.003G158300 Gossypium raimondii HOM04D005814 ORTHO04D008145 2.5e-177 625.5 531 58.4
Mapoly0091s0082 Marchantia polymorpha HOM04D005814 ORTHO04D008145 8.0e-176 620.5 539 57.5
SMO147G0132 Selaginella moellendorffii HOM04D005814 ORTHO04D008145 3.7e-165 585.1 533 55.0
GSVIVG01019746001 Vitis vinifera HOM04D005814 ORTHO04D008145 5.0e-154 548.1 405 67.2
Pp3c23_15810 Physcomitrium patens HOM04D005814 ORTHO04D008145 8.9e-151 537.3 514 52.9
PAB00064689 Picea abies HOM04D005814 ORTHO04D008145 7.4e-121 438.0 564 47.5
MDO.mRNA.g.9115.1 Malus domestica HOM04D005814 ORTHO04D008145 4.8e-96 355.5 493 45.8
MCO12G378 Micromonas commoda HOM04D005814 ORTHO04D008145 5.1e-82 308.9 500 39.0
Cre12.g519900 Chlamydomonas reinhardtii HOM04D005814 ORTHO04D008145 1.0e-66 258.1 716 33.7
CAN.G20.10 Capsicum annuum HOM04D005814 ORTHO04D008145 2.8e-64 250.0 270 50.7
RCO.g.28000.000002 Ricinus communis HOM04D005814 ORTHO04D006970 1.9e-31 141.0 458 25.8
Achn188561 Actinidia chinensis HOM04D005814 ORTHO04D008145 7.8e-30 135.6 190 42.1

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (1 genes)
Beta vulgaris (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Cajanus cajan (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Carica papaya (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (2 genes)
Ricinus communis (2 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

Program Settings