Interactive Phylogenetics Module

Gene Id
LOC_Os06g07160

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os06g07160 Oryza sativa ssp. japonica HOM04D004108 ORTHO04D005285 2.8e-157 557.8 338 100.0
Zm00001d045193 Zea mays HOM04D004108 ORTHO04D005285 1.7e-122 442.2 337 82.5
Cc06_g22600 Coffea canephora HOM04D004108 ORTHO04D005285 4.1e-79 298.1 329 61.1
GSVIVG01010902001 Vitis vinifera HOM04D004108 ORTHO04D005285 9.0e-79 297.0 319 50.5
TCA.TCM_039342 Theobroma cacao HOM04D004108 ORTHO04D005285 1.5e-78 296.2 326 48.8
Solyc07g009320.2 Solanum lycopersicum HOM04D004108 ORTHO04D005285 2.6e-78 295.4 329 53.8
PGSC0003DMG400008514 Solanum tuberosum HOM04D004108 ORTHO04D005285 5.9e-78 294.3 329 61.7
ATR0626G278 Amborella trichopoda HOM04D004108 ORTHO04D005285 2.2e-77 292.4 330 62.1
Peaxi162Scf00324g00718 Petunia axillaris HOM04D004108 ORTHO04D005285 1.9e-76 289.3 329 52.6
CAN.G1668.9 Capsicum annuum HOM04D004108 ORTHO04D005285 9.3e-76 287.0 329 52.3
Gorai.004G025600 Gossypium raimondii HOM04D004108 ORTHO04D005285 6.1e-75 284.3 331 52.0
HBR3021G004 Hevea brasiliensis HOM04D004108 ORTHO04D005285 7.9e-75 283.9 329 56.8
ZJU.LOC107421027 Ziziphus jujuba HOM04D004108 ORTHO04D005285 1.3e-74 283.1 324 58.0
Cpa.g.sc95.29 Carica papaya HOM04D004108 ORTHO04D005285 8.7e-74 280.4 326 49.4
Prupe.1G079200 Prunus persica HOM04D004108 ORTHO04D005285 4.3e-73 278.1 320 49.7
Manes.04G060300 Manihot esculenta HOM04D004108 ORTHO04D005285 5.7e-73 277.7 329 55.9
Eucgr.C00132 Eucalyptus grandis HOM04D004108 ORTHO04D005285 2.2e-72 275.8 327 51.1
Ciclev10008916m.g Citrus clementina HOM04D004108 ORTHO04D005285 2.8e-72 275.4 325 50.8
Cla018847.g Citrullus lanatus HOM04D004108 ORTHO04D005285 1.8e-71 272.7 325 56.3
MELO3C017439 Cucumis melo HOM04D004108 ORTHO04D005285 6.9e-71 270.8 323 58.2
Bv8_198200_ajgc Beta vulgaris HOM04D004108 ORTHO04D005285 1.2e-70 270.0 334 50.9
AH014427 Amaranthus hypochondriacus HOM04D004108 ORTHO04D005285 5.9e-70 267.7 331 49.8
AUR62033246 Chenopodium quinoa HOM04D004108 ORTHO04D005285 2.9e-69 265.4 328 44.2
Cucsa.081250 Cucumis sativus L. HOM04D004108 ORTHO04D005285 2.5e-68 262.3 327 51.1
Glyma.15G164000 Glycine max HOM04D004108 ORTHO04D005285 5.5e-68 261.2 322 49.4
NNU_15073 Nelumbo nucifera HOM04D004108 ORTHO04D005285 7.2e-68 260.8 209 60.8
THA.LOC104819968 Tarenaya hassleriana HOM04D004108 ORTHO04D005285 1.2e-67 260.0 313 53.7
Glyma.09G057900 Glycine max HOM04D004108 ORTHO04D005285 3.6e-67 258.5 327 49.8
Carubv10013910m.g Capsella rubella HOM04D004108 ORTHO04D005285 3.9e-66 255.0 322 46.6
Migut.L01897 Erythranthe guttata HOM04D004108 ORTHO04D005285 3.9e-66 255.0 322 58.4
Bo9g027530 Brassica oleracea HOM04D004108 ORTHO04D005285 6.7e-66 254.2 312 47.4
AT2G19080 Arabidopsis thaliana HOM04D004108 ORTHO04D005285 1.5e-65 253.1 322 49.4
Tp3g32480 Schrenkiella parvula HOM04D004108 ORTHO04D005285 1.5e-65 253.1 319 48.9
Potri.006G077100 Populus trichocarpa HOM04D004108 ORTHO04D005285 2.0e-65 252.7 328 56.4
FVE17055 Fragaria vesca HOM04D004108 ORTHO04D005285 4.8e-64 248.1 237 52.3
C.cajan_16440.g Cajanus cajan HOM04D004108 ORTHO04D005285 8.2e-64 247.3 238 51.3
Brara.G00147 Brassica rapa HOM04D004108 ORTHO04D005285 1.4e-63 246.5 231 50.2
AL3G52840 Arabidopsis lyrata HOM04D004108 ORTHO04D005285 1.4e-63 246.5 238 50.0
Vradi07g22470 Vigna radiata var. radiata HOM04D004108 ORTHO04D005285 2.4e-63 245.7 353 46.5
Pbr038795.2.g Pyrus bretschneideri HOM04D004108 ORTHO04D005285 2.4e-63 245.7 332 41.3
Bo7g002090 Brassica oleracea HOM04D004108 ORTHO04D005285 3.1e-63 245.4 231 50.2
Brara.I01108 Brassica rapa HOM04D004108 ORTHO04D005285 3.1e-63 245.4 230 50.9
Glyma.13G099400 Glycine max HOM04D004108 ORTHO04D005285 3.1e-63 245.4 327 51.1
Araip.UJ65V Arachis ipaensis HOM04D004108 ORTHO04D005285 4.5e-62 241.5 320 54.4
Potri.T161600 Populus trichocarpa HOM04D004108 ORTHO04D005285 1.0e-61 240.4 240 50.8
C.cajan_03692.g Cajanus cajan HOM04D004108 ORTHO04D005285 1.3e-61 240.0 328 49.1
COL.COLO4_29315 Corchorus olitorius HOM04D004108 ORTHO04D005285 5.0e-61 238.0 278 53.6
Glyma.17G060700 Glycine max HOM04D004108 ORTHO04D005285 6.5e-61 237.7 328 50.6
UGI.Scf00278.13173 Utricularia gibba HOM04D004108 ORTHO04D005285 8.5e-61 237.3 324 39.5
Vradi0264s00060 Vigna radiata var. radiata HOM04D004108 ORTHO04D005285 1.4e-60 236.5 328 44.8
Medtr2g036910 Medicago truncatula HOM04D004108 ORTHO04D005285 1.9e-60 236.1 239 49.4
TPR.G5388 Trifolium pratense HOM04D004108 ORTHO04D005285 5.5e-60 234.6 322 48.8
Ca_08865.g Cicer arietinum HOM04D004108 ORTHO04D005285 5.5e-60 234.6 238 48.7
TPR.G9028 Trifolium pratense HOM04D004108 ORTHO04D005285 7.2e-60 234.2 238 49.2
Medtr4g127630 Medicago truncatula HOM04D004108 ORTHO04D005285 6.1e-59 231.1 326 42.6
Pbr024817.1.g Pyrus bretschneideri HOM04D004108 ORTHO04D005285 1.0e-58 230.3 206 53.9
RCO.g.29462.000013 Ricinus communis HOM04D004108 ORTHO04D005285 2.6e-57 225.7 209 52.6
Achn018371 Actinidia chinensis HOM04D004229 ORTHO04D004771 9.1e-55 217.2 279 47.3
AUR62021331 Chenopodium quinoa HOM04D004108 ORTHO04D005285 1.0e-53 213.8 329 38.9
Pp3c12_12510 Physcomitrium patens HOM04D004108 ORTHO04D005285 2.5e-52 209.1 248 43.5
Mapoly0001s0301 Marchantia polymorpha HOM04D004108 ORTHO04D005285 5.5e-52 208.0 317 42.9
Ca_03229.g Cicer arietinum HOM04D004432 ORTHO04D005797 1.8e-50 203.0 209 47.8
Pp3c4_10660 Physcomitrium patens HOM04D004108 ORTHO04D005285 6.7e-50 201.1 319 37.0
Araip.J0LMG Arachis ipaensis HOM04D004108 ORTHO04D005285 1.2e-49 200.3 352 45.7
DCAR_019823 Daucus carota HOM04D004432 ORTHO04D005797 9.1e-47 190.7 334 37.1
SMO358G0154 Selaginella moellendorffii HOM04D004108 ORTHO04D005285 8.0e-43 177.6 234 41.9
PAB00033809 Picea abies HOM04D004108 ORTHO04D005285 2.5e-36 156.0 139 51.8
CAN.G609.4 Capsicum annuum HOM04D004108 ORTHO04D005285 2.3e-34 149.4 144 51.4
Manes.14G161400 Manihot esculenta HOM04D004108 ORTHO04D005285 4.5e-30 135.2 112 57.1
CAN.G497.61 Capsicum annuum HOM04D004108 ORTHO04D005285 5.6e-28 128.3 115 55.7
Potri.T094701 Populus trichocarpa HOM04D004108 ORTHO04D005285 1.2e-27 127.1 121 55.4
Achn347301 Actinidia chinensis HOM04D004108 ORTHO04D005285 3.4e-25 119.0 277 38.6
SMO367G0296 Selaginella moellendorffii HOM04D004108 ORTHO04D005285 4.7e-19 98.6 245 31.8
MDO.mRNA.g.1994.2 Malus domestica HOM04D004108 ORTHO04D005285 1.4e-18 97.1 226 43.8
MDO.mRNA.g.7414.5 Malus domestica HOM04D004108 ORTHO04D005285 8.3e-16 87.8 172 49.4
CAN.G266.1 Capsicum annuum HOM04D004108 ORTHO04D005285 1.1e-15 87.4 158 36.7
Potri.018G147701 Populus trichocarpa HOM04D004108 ORTHO04D005285 3.6e-11 72.4 73 53.4
SMO367G1182 Selaginella moellendorffii HOM04D004108 ORTHO04D005285 1.1e-10 70.9 179 30.7
MDO.mRNA.g.1994.1 Malus domestica HOM04D004108 ORTHO04D005285 1.4e-07 60.5 46 56.5
AUR62034598 Chenopodium quinoa HOM04D014831 ORTHO04D003966 4.1e-07 58.9 52 51.9

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (2 genes)
Beta vulgaris (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (4 genes)
Carica papaya (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (4 genes)
Gossypium raimondii (1 genes)
Hevea brasiliensis (1 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (4 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (2 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (3 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

Program Settings