Interactive Phylogenetics Module

Gene Id
LOC_Os02g17650

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os02g17650 Oryza sativa ssp. japonica HOM04D004902 ORTHO04D006381 8.0e-267 922.2 422 100.0
Zm00001d015985 Zea mays HOM04D004902 ORTHO04D006381 1.4e-223 778.5 434 82.0
Glyma.06G084100 Glycine max HOM04D004902 ORTHO04D006381 4.5e-201 703.7 423 74.0
Gorai.009G050600 Gossypium raimondii HOM04D004902 ORTHO04D006381 2.4e-199 698.0 424 72.2
COL.COLO4_18671 Corchorus olitorius HOM04D004902 ORTHO04D006381 4.2e-199 697.2 425 73.2
Glyma.04G082500 Glycine max HOM04D004902 ORTHO04D006381 2.7e-198 694.5 423 73.0
Cc08_g09240 Coffea canephora HOM04D004902 ORTHO04D006381 1.3e-197 692.2 424 72.4
TCA.TCM_037170 Theobroma cacao HOM04D004902 ORTHO04D006381 1.3e-197 692.2 424 71.9
Medtr3g110160 Medicago truncatula HOM04D004902 ORTHO04D006381 3.9e-197 690.6 424 73.1
FVE08819 Fragaria vesca HOM04D004902 ORTHO04D006381 3.3e-196 687.6 424 71.9
GSVIVG01035645001 Vitis vinifera HOM04D004902 ORTHO04D006381 1.6e-195 685.3 424 71.2
RCO.g.29794.000127 Ricinus communis HOM04D004902 ORTHO04D006381 1.6e-195 685.3 424 70.0
Eucgr.C02909 Eucalyptus grandis HOM04D004902 ORTHO04D006381 2.1e-195 684.9 424 71.5
C.cajan_11064.g Cajanus cajan HOM04D004902 ORTHO04D006381 2.8e-195 684.5 423 72.8
Bv2_032060_rrem Beta vulgaris HOM04D004902 ORTHO04D006381 4.8e-195 683.7 423 71.9
Pbr040374.1.g Pyrus bretschneideri HOM04D004902 ORTHO04D006381 4.8e-195 683.7 424 72.2
Manes.16G072000 Manihot esculenta HOM04D004902 ORTHO04D006381 2.4e-194 681.4 424 71.0
Pbr009217.1.g Pyrus bretschneideri HOM04D004902 ORTHO04D006381 2.4e-194 681.4 423 71.6
Prupe.1G450300 Prunus persica HOM04D004902 ORTHO04D006381 3.1e-194 681.0 424 71.7
CAN.G21.50 Capsicum annuum HOM04D004902 ORTHO04D006381 6.9e-194 679.9 424 70.3
Peaxi162Scf00822g00210 Petunia axillaris HOM04D004902 ORTHO04D006381 2.0e-193 678.3 424 70.0
Migut.A00220 Erythranthe guttata HOM04D004902 ORTHO04D006381 4.5e-193 677.2 424 70.0
Potri.018G040200 Populus trichocarpa HOM04D004902 ORTHO04D006381 7.6e-193 676.4 424 71.2
Ciclev10008169m.g Citrus clementina HOM04D004902 ORTHO04D006381 1.7e-192 675.2 423 69.7
DCAR_003119 Daucus carota HOM04D004902 ORTHO04D006381 2.9e-192 674.5 435 69.4
UGI.Scf00475.16421 Utricularia gibba HOM04D004902 ORTHO04D006381 4.9e-192 673.7 424 70.3
ATR0315G120 Amborella trichopoda HOM04D004902 ORTHO04D006381 6.5e-192 673.3 423 70.2
PGSC0003DMG400029051 Solanum tuberosum HOM04D004902 ORTHO04D006381 4.2e-191 670.6 425 69.4
Solyc08g068570.2 Solanum lycopersicum HOM04D004902 ORTHO04D006381 7.1e-191 669.8 425 69.6
Gorai.001G027200 Gossypium raimondii HOM04D004902 ORTHO04D006381 7.1e-191 669.8 424 69.1
Pbr008813.1.g Pyrus bretschneideri HOM04D004902 ORTHO04D006381 2.1e-190 668.3 416 71.6
Cucsa.161370 Cucumis sativus L. HOM04D004902 ORTHO04D006381 2.7e-190 667.9 423 69.7
Araip.Q75IR Arachis ipaensis HOM04D004902 ORTHO04D006381 3.5e-190 667.5 423 70.0
AUR62009303 Chenopodium quinoa HOM04D004902 ORTHO04D006381 1.0e-189 666.0 427 69.3
Ca_01896.g Cicer arietinum HOM04D004902 ORTHO04D006381 1.0e-189 666.0 423 71.2
MELO3C011150 Cucumis melo HOM04D004902 ORTHO04D006381 1.8e-189 665.2 423 69.5
Tp7g30530 Schrenkiella parvula HOM04D004902 ORTHO04D006381 1.8e-189 665.2 425 68.9
Brara.K00688 Brassica rapa HOM04D004902 ORTHO04D006381 4.8e-187 657.1 425 68.2
Bo7g115850 Brassica oleracea HOM04D004902 ORTHO04D006381 8.2e-187 656.4 425 68.5
Carubv10004591m.g Capsella rubella HOM04D004902 ORTHO04D006381 1.8e-186 655.2 425 67.5
AL7G18970 Arabidopsis lyrata HOM04D004902 ORTHO04D006381 2.2e-184 648.3 425 67.3
AT4G32770 Arabidopsis thaliana HOM04D004902 ORTHO04D006381 1.9e-183 645.2 425 67.1
THA.LOC104803808 Tarenaya hassleriana HOM04D004902 ORTHO04D006381 5.5e-175 617.1 365 73.2
Achn276691 Actinidia chinensis HOM04D004902 ORTHO04D006381 7.9e-174 613.2 424 68.2
Cla022218.g Citrullus lanatus HOM04D004902 ORTHO04D006381 1.8e-173 612.1 430 64.9
Vradi05g08890 Vigna radiata var. radiata HOM04D004902 ORTHO04D006381 6.7e-173 610.1 423 67.1
AUR62041718 Chenopodium quinoa HOM04D004902 ORTHO04D006381 4.8e-171 604.0 438 64.6
Cpa.g.sc7.259 Carica papaya HOM04D004902 ORTHO04D006381 5.3e-170 600.5 378 70.9
AH023331 Amaranthus hypochondriacus HOM04D004902 ORTHO04D006381 2.2e-168 595.1 428 62.1
AH023330 Amaranthus hypochondriacus HOM04D004902 ORTHO04D006381 1.6e-166 589.0 347 75.2
HBR1198G028 Hevea brasiliensis HOM04D004902 ORTHO04D006381 1.3e-163 579.3 424 62.5
Pp3c7_470 Physcomitrium patens HOM04D004902 ORTHO04D006381 4.5e-161 570.9 428 60.7
Mapoly0027s0036 Marchantia polymorpha HOM04D004902 ORTHO04D006381 8.5e-160 566.6 425 60.2
MDO.mRNA.g.4.24 Malus domestica HOM04D004902 ORTHO04D006381 5.9e-153 543.9 366 68.0
Pp3c20_5100 Physcomitrium patens HOM04D004902 ORTHO04D006381 4.1e-146 521.2 427 55.5
SMO351G0603 Selaginella moellendorffii HOM04D004902 ORTHO04D006381 9.5e-143 510.0 396 57.1
NNU_21411 Nelumbo nucifera HOM04D004902 ORTHO04D006381 5.0e-120 434.5 240 80.0
Cc07_g15020 Coffea canephora HOM04D004902 ORTHO04D006381 1.1e-119 433.3 267 70.8
ZJU.LOC107407440 Ziziphus jujuba HOM04D004902 ORTHO04D006381 1.1e-101 373.6 208 80.3
Cre01.g013801 Chlamydomonas reinhardtii HOM04D004902 ORTHO04D006381 2.4e-101 372.5 452 41.4
ZJU.LOC107407439 Ziziphus jujuba HOM04D004902 ORTHO04D006381 4.0e-101 371.7 208 79.8
Potri.006G240100 Populus trichocarpa HOM04D004902 ORTHO04D006381 4.9e-75 285.0 272 51.8
MCO11G337 Micromonas commoda HOM04D004902 ORTHO04D006381 1.3e-72 276.9 426 39.2
PAB00016973 Picea abies HOM04D004902 ORTHO04D006381 3.4e-60 235.7 184 57.1
MDO.mRNA.g.3313.5 Malus domestica HOM04D004902 ORTHO04D006381 5.9e-60 235.0 184 58.2
AH023325 Amaranthus hypochondriacus HOM04D004902 ORTHO04D006381 7.4e-55 218.0 159 61.0
Glyma.04G082300 Glycine max HOM04D004902 ORTHO04D006381 2.5e-50 203.0 126 71.4
PAB00035731 Picea abies HOM04D004902 ORTHO04D006381 2.5e-42 176.4 89 79.8
Araip.L7GKF Arachis ipaensis HOM04D004902 ORTHO04D006381 1.6e-36 157.1 130 60.0
PAB00023479 Picea abies HOM04D004902 ORTHO04D006381 4.7e-33 145.6 99 60.6
C.cajan_11066.g Cajanus cajan HOM04D004902 ORTHO04D006381 7.7e-28 128.3 86 65.1
Araip.A28TV Arachis ipaensis HOM04D004902 ORTHO04D006381 3.9e-11 72.8 103 38.8
Bo1g010010 Brassica oleracea HOM04D004902 ORTHO04D003529 1.7e-06 57.4 43 62.8

Actinidia chinensis (1 genes)
Amaranthus hypochondriacus (3 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (3 genes)
Beta vulgaris (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (3 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (2 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (3 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (2 genes)

Program Settings