Interactive Phylogenetics Module

Gene Id
LOC_Os01g60040

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os01g60040 Oryza sativa ssp. japonica HOM04D002336 ORTHO04D004558 1.2e-136 488.8 254 100.0
Zm00001d043093 Zea mays HOM04D002336 ORTHO04D004558 2.7e-91 338.2 218 84.9
Zm00001d012525 Zea mays HOM04D002336 ORTHO04D004558 5.0e-90 334.0 216 84.3
Achn345301 Actinidia chinensis HOM04D002336 ORTHO04D004558 1.1e-81 306.2 219 74.0
Eucgr.D00655 Eucalyptus grandis HOM04D002336 ORTHO04D004558 5.2e-79 297.4 220 72.7
ZJU.LOC107414974 Ziziphus jujuba HOM04D002336 ORTHO04D004558 6.8e-79 297.0 222 70.7
TPR.G10297 Trifolium pratense HOM04D002336 ORTHO04D004558 2.0e-78 295.4 221 71.0
Migut.M01176 Erythranthe guttata HOM04D002336 ORTHO04D004558 4.4e-78 294.3 216 71.8
Gorai.009G117700 Gossypium raimondii HOM04D002336 ORTHO04D004558 7.5e-78 293.5 220 69.5
Prupe.1G083500 Prunus persica HOM04D002336 ORTHO04D004558 8.3e-77 290.0 222 71.2
Glyma.20G183400 Glycine max HOM04D002336 ORTHO04D004558 2.4e-76 288.5 221 67.9
Pbr040009.1.g Pyrus bretschneideri HOM04D002336 ORTHO04D004558 2.4e-76 288.5 225 70.7
Ciclev10014013m.g Citrus clementina HOM04D002336 ORTHO04D004558 2.4e-76 288.5 220 69.5
TCA.TCM_027100 Theobroma cacao HOM04D002336 ORTHO04D004558 2.4e-76 288.5 218 68.3
Glyma.10G207500 Glycine max HOM04D002336 ORTHO04D004558 7.0e-76 287.0 224 67.0
Pbr013477.1.g Pyrus bretschneideri HOM04D002336 ORTHO04D004558 1.2e-75 286.2 225 70.7
Potri.001G443200 Populus trichocarpa HOM04D002336 ORTHO04D004558 4.6e-75 284.3 222 68.5
FVE12411 Fragaria vesca HOM04D002336 ORTHO04D004558 7.8e-75 283.5 237 66.2
Bv8_183730_khaj Beta vulgaris HOM04D002336 ORTHO04D004558 1.0e-74 283.1 219 68.0
Bo3g028400 Brassica oleracea HOM04D002336 ORTHO04D004558 1.3e-74 282.7 234 65.0
Ca_08462.g Cicer arietinum HOM04D002336 ORTHO04D004558 1.3e-74 282.7 220 68.6
Manes.16G062100 Manihot esculenta HOM04D002336 ORTHO04D004558 1.7e-74 282.3 222 67.6
Tp4g17870 Schrenkiella parvula HOM04D002336 ORTHO04D004558 5.0e-74 280.8 215 67.9
Medtr8g023010 Medicago truncatula HOM04D002336 ORTHO04D004558 5.6e-73 277.3 227 66.1
ATR1127G018 Amborella trichopoda HOM04D002336 ORTHO04D004558 5.6e-73 277.3 230 66.1
RCO.g.28293.000001 Ricinus communis HOM04D002336 ORTHO04D004558 1.2e-72 276.2 220 66.8
AUR62014778 Chenopodium quinoa HOM04D002336 ORTHO04D004558 1.6e-72 275.8 214 66.4
Bo4g036300 Brassica oleracea HOM04D002336 ORTHO04D004558 1.4e-71 272.7 217 67.3
AL4G31700 Arabidopsis lyrata HOM04D002336 ORTHO04D004558 1.8e-71 272.3 216 68.1
Cc02_g12860 Coffea canephora HOM04D002336 ORTHO04D004558 3.1e-71 271.6 220 67.7
GSVIVG01006792001 Vitis vinifera HOM04D002336 ORTHO04D004558 5.2e-71 270.8 173 77.5
AT2G35630 Arabidopsis thaliana HOM04D002336 ORTHO04D004558 1.2e-70 269.6 216 67.6
DCAR_004114 Daucus carota HOM04D002336 ORTHO04D004558 1.5e-70 269.2 221 65.6
COL.COLO4_22862 Corchorus olitorius HOM04D002336 ORTHO04D004558 3.4e-70 268.1 220 68.2
AH021627 Amaranthus hypochondriacus HOM04D002336 ORTHO04D004558 4.4e-70 267.7 217 66.4
Carubv10025521m.g Capsella rubella HOM04D002336 ORTHO04D004558 9.8e-70 266.5 219 66.2
HBR2986G006 Hevea brasiliensis HOM04D002336 ORTHO04D004558 9.8e-70 266.5 223 64.1
Potri.011G153700 Populus trichocarpa HOM04D002336 ORTHO04D004558 1.7e-69 265.8 186 73.1
NNU_16199 Nelumbo nucifera HOM04D002336 ORTHO04D004558 2.2e-69 265.4 223 67.3
Medtr1g094165 Medicago truncatula HOM04D002336 ORTHO04D004558 1.4e-68 262.7 188 71.8
AUR62016965 Chenopodium quinoa HOM04D002336 ORTHO04D004558 1.4e-68 262.7 171 75.4
Solyc02g078640.2 Solanum lycopersicum HOM04D002336 ORTHO04D004558 1.9e-68 262.3 170 76.5
Brara.E00952 Brassica rapa HOM04D002336 ORTHO04D004558 2.4e-68 261.9 173 75.1
Cpa.g.sc192.7 Carica papaya HOM04D002336 ORTHO04D004558 7.0e-68 260.4 173 75.1
UGI.Scf00068.6247 Utricularia gibba HOM04D002336 ORTHO04D004558 2.0e-67 258.8 214 65.9
Cucsa.048630 Cucumis sativus L. HOM04D002336 ORTHO04D004558 6.0e-67 257.3 223 64.6
MELO3C007036 Cucumis melo HOM04D002336 ORTHO04D004558 6.0e-67 257.3 221 64.3
C.cajan_24687.g Cajanus cajan HOM04D002336 ORTHO04D004558 6.0e-67 257.3 243 60.1
THA.LOC104798541 Tarenaya hassleriana HOM04D002336 ORTHO04D004558 9.5e-65 250.0 163 76.1
UGI.Scf00024.3016 Utricularia gibba HOM04D002336 ORTHO04D004558 5.8e-62 240.7 219 62.1
MDO.mRNA.g.1438.36 Malus domestica HOM04D002336 ORTHO04D004558 7.5e-62 240.4 153 79.1
SMO230G0112 Selaginella moellendorffii HOM04D002336 ORTHO04D004558 9.8e-62 240.0 221 60.2
Pp3c15_23870 Physcomitrium patens HOM04D002336 ORTHO04D004558 4.1e-60 234.6 219 60.3
Mapoly0009s0135 Marchantia polymorpha HOM04D002336 ORTHO04D004558 1.2e-56 223.0 171 66.1
Pp3c9_24390 Physcomitrium patens HOM04D002336 ORTHO04D004558 6.2e-56 220.7 174 65.5
Vradi08g16630 Vigna radiata var. radiata HOM04D002336 ORTHO04D004558 4.0e-55 218.0 226 55.8
Peaxi162Scf00524g00056 Petunia axillaris HOM04D002336 ORTHO04D004558 1.7e-53 212.6 168 67.9
MDO.mRNA.g.4161.7 Malus domestica HOM04D002336 ORTHO04D004558 1.2e-48 196.4 165 65.5
PAB00028644 Picea abies HOM04D002336 ORTHO04D004558 1.0e-42 176.8 148 63.5
Cla009864.g Citrullus lanatus HOM04D002336 ORTHO04D004558 1.7e-37 159.5 148 61.5
CAN.G1627.24 Capsicum annuum HOM04D002336 ORTHO04D004558 1.5e-22 109.8 220 40.0
Achn102051 Actinidia chinensis HOM04D002336 ORTHO04D004558 5.8e-22 107.8 223 37.7
Cla009865.g Citrullus lanatus HOM04D002336 ORTHO04D004558 1.3e-21 106.7 75 69.3
PAB00002337 Picea abies HOM04D002336 ORTHO04D004558 2.9e-21 105.5 74 70.3
MCO15G118 Micromonas commoda HOM04D002336 ORTHO04D004558 4.8e-16 88.2 177 31.1
Cre03.g149800 Chlamydomonas reinhardtii HOM04D002336 ORTHO04D004558 1.0e-10 70.5 164 31.7

Actinidia chinensis (2 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (0 genes)
Beta vulgaris (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Cajanus cajan (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Carica papaya (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (1 genes)
Hevea brasiliensis (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (2 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (2 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)
Ziziphus jujuba (1 genes)

Program Settings