Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
FVE15538	Fragaria vesca	HOM04D003718	ORTHO04D003884	5.0e-106	386.7	196	100.0
FVE13540	Fragaria vesca	HOM04D000263	ORTHO04D000149	1.5e-33	146.0	118	62.7
FVE27342	Fragaria vesca	HOM04D003718	ORTHO04D003884	6.5e-29	130.6	121	58.7
FVE31249	Fragaria vesca	HOM04D003718	ORTHO04D003884	6.5e-29	130.6	141	52.5
Pbr040263.2.g	Pyrus bretschneideri	HOM04D003718	ORTHO04D003884	5.5e-28	127.5	109	57.8
FVE27570	Fragaria vesca	HOM04D003718	ORTHO04D003884	5.1e-26	120.9	102	61.8
Prupe.3G196500	Prunus persica	HOM04D003718	ORTHO04D003884	2.0e-25	119.0	110	54.5
MDO.mRNA.g.4942.5	Malus domestica	HOM04D003718	ORTHO04D003884	2.0e-25	119.0	108	55.6
FVE31256	Fragaria vesca	HOM04D003718	ORTHO04D003884	5.7e-25	117.5	136	49.3
FVE15540	Fragaria vesca	HOM04D003718	ORTHO04D003884	2.4e-23	112.1	120	50.0
ZJU.LOC107416837	Ziziphus jujuba	HOM04D003718	ORTHO04D003884	4.5e-22	107.8	114	48.2
ZJU.LOC107433890	Ziziphus jujuba	HOM04D003718	ORTHO04D003884	4.5e-22	107.8	114	48.2
HBR2669G005	Hevea brasiliensis	HOM04D003718	ORTHO04D003884	2.3e-18	95.5	113	41.6
Ciclev10015675m.g	Citrus clementina	HOM04D003718	ORTHO04D003884	3.3e-17	91.7	124	43.5
DCAR_019672	Daucus carota	HOM04D003718	ORTHO04D003884	3.3e-17	91.7	142	36.6
Manes.12G063700	Manihot esculenta	HOM04D003718	ORTHO04D003884	5.7e-17	90.9	93	43.0
TCA.TCM_002431	Theobroma cacao	HOM04D001573	ORTHO04D006087	1.7e-16	89.4	107	41.1
RCO.g.29732.000011	Ricinus communis	HOM04D003718	ORTHO04D003884	2.2e-16	89.0	93	44.1
TPR.G22472	Trifolium pratense	HOM04D003718	ORTHO04D003884	1.8e-15	85.9	108	39.8
TCA.TCM_002436	Theobroma cacao	HOM04D000072	ORTHO04D001323	2.4e-15	85.5	106	41.5
Potri.002G216900	Populus trichocarpa	HOM04D003718	ORTHO04D003884	4.1e-15	84.7	84	47.6
Ca_19237.g	Cicer arietinum	HOM04D003718	ORTHO04D003884	5.3e-15	84.3	93	41.9
TPR.G40538	Trifolium pratense	HOM04D003718	ORTHO04D003884	9.1e-15	83.6	96	40.6
AUR62035876	Chenopodium quinoa	HOM04D003718	ORTHO04D003884	1.2e-14	83.2	113	40.7
C.cajan_27807.g	Cajanus cajan	HOM04D003718	ORTHO04D003884	2.6e-14	82.0	112	34.8
AUR62014996	Chenopodium quinoa	HOM04D003718	ORTHO04D003884	4.5e-14	81.3	113	38.9
Medtr3g082740	Medicago truncatula	HOM04D003718	ORTHO04D003884	7.7e-14	80.5	100	39.0
NNU_08568	Nelumbo nucifera	HOM04D003718	ORTHO04D003884	1.3e-13	79.7	124	38.7
Cla015698.g	Citrullus lanatus	HOM04D003718	ORTHO04D003884	1.7e-13	79.3	127	37.0
Gorai.007G165400	Gossypium raimondii	HOM04D003718	ORTHO04D003884	2.2e-13	79.0	99	41.4
Medtr3g082720	Medicago truncatula	HOM04D003718	ORTHO04D003884	2.2e-13	79.0	91	38.5
Gorai.001G098800	Gossypium raimondii	HOM04D003718	ORTHO04D003884	2.9e-13	78.6	93	41.9
AUR62029125	Chenopodium quinoa	HOM04D003718	ORTHO04D003884	3.8e-13	78.2	113	38.1
Cucsa.310130	Cucumis sativus L.	HOM04D003718	ORTHO04D003884	1.1e-12	76.6	114	36.0
Araip.K9BLH	Arachis ipaensis	HOM04D003718	ORTHO04D003884	2.5e-12	75.5	95	34.7
Glyma.13G007400	Glycine max	HOM04D003718	ORTHO04D003884	2.5e-12	75.5	91	35.2
PGSC0003DMG401004292	Solanum tuberosum	HOM04D003718	ORTHO04D003884	5.5e-12	74.3	175	30.9
Migut.L00790	Erythranthe guttata	HOM04D003718	ORTHO04D003884	5.5e-12	74.3	140	30.7
MDO.mRNA.g.4942.4	Malus domestica	HOM04D000072	ORTHO04D003884	7.2e-12	73.9	62	54.8
Peaxi162Scf00802g00028	Petunia axillaris	HOM04D003718	ORTHO04D003884	1.2e-11	73.2	114	38.6
Glyma.13G186300	Glycine max	HOM04D003718	ORTHO04D003884	1.6e-11	72.8	96	34.4
Vradi06g08100	Vigna radiata var. radiata	HOM04D003718	ORTHO04D003884	2.1e-11	72.4	112	31.2
Medtr6g042090	Medicago truncatula	HOM04D003718	ORTHO04D003884	4.7e-11	71.2	142	31.0
ATR0751G270	Amborella trichopoda	HOM04D003718	ORTHO04D003884	4.7e-11	71.2	89	39.3
Solyc12g006060.1	Solanum lycopersicum	HOM04D003718	ORTHO04D003884	6.1e-11	70.9	145	31.7
Peaxi162Scf00047g02035	Petunia axillaris	HOM04D003718	ORTHO04D003884	4.0e-10	68.2	93	33.3
CAN.G437.6	Capsicum annuum	HOM04D003718	ORTHO04D003884	1.2e-09	66.6	94	37.2
Glyma.15G224000	Glycine max	HOM04D003718	ORTHO04D003884	2.0e-09	65.9	91	30.8
Medtr6g042040	Medicago truncatula	HOM04D003718	ORTHO04D003884	2.6e-09	65.5	134	30.6
Solyc07g045320.2	Solanum lycopersicum	HOM04D003718	ORTHO04D003884	9.7e-09	63.5	94	34.0
Bv9_206120_hpnd	Beta vulgaris	HOM04D003718	ORTHO04D003884	1.7e-08	62.8	80	37.5
COL.COLO4_19638	Corchorus olitorius	HOM04D003718	ORTHO04D003884	4.8e-08	61.2	99	32.3
Cc00_g01040	Coffea canephora	HOM04D003718	ORTHO04D003884	6.3e-08	60.8	99	30.3
PGSC0003DMG400017406	Solanum tuberosum	HOM04D003718	ORTHO04D003884	1.8e-07	59.3	103	33.0
CAN.G437.9	Capsicum annuum	HOM04D003718	ORTHO04D003884	2.4e-07	58.9	86	34.9
AH000124	Amaranthus hypochondriacus	HOM04D003718	ORTHO04D003884	9.1e-07	57.0	79	36.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
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