Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Eucgr.C03814	Eucalyptus grandis	HOM04D007714	ORTHO04D010023	5.1e-43	176.4	97	100.0
Cc06_g09900	Coffea canephora	HOM04D007714	ORTHO04D010023	2.0e-18	94.7	98	59.2
Prupe.7G233600	Prunus persica	HOM04D007714	ORTHO04D010023	2.6e-18	94.4	102	60.8
Potri.018G082800	Populus trichocarpa	HOM04D007714	ORTHO04D010023	7.4e-18	92.8	105	59.0
RCO.g.29912.000224	Ricinus communis	HOM04D007714	ORTHO04D010023	2.8e-17	90.9	92	60.9
THA.LOC104822629	Tarenaya hassleriana	HOM04D007714	ORTHO04D010023	6.3e-17	89.7	102	57.8
HBR1021G016	Hevea brasiliensis	HOM04D007714	ORTHO04D010023	1.8e-16	88.2	99	63.6
Glyma.08G037500	Glycine max	HOM04D007714	ORTHO04D010023	1.2e-15	85.5	97	57.7
COL.COLO4_18682	Corchorus olitorius	HOM04D007714	ORTHO04D010023	1.5e-15	85.1	105	55.2
MELO3C004564	Cucumis melo	HOM04D007714	ORTHO04D010023	2.6e-15	84.3	102	57.8
Carubv10010738m.g	Capsella rubella	HOM04D007714	ORTHO04D010023	3.4e-15	84.0	101	57.4
ZJU.LOC107431780	Ziziphus jujuba	HOM04D007714	ORTHO04D010023	4.5e-15	83.6	101	57.4
Cucsa.116410	Cucumis sativus L.	HOM04D007714	ORTHO04D010023	5.9e-15	83.2	102	56.9
AT1G55205	Arabidopsis thaliana	HOM04D007714	ORTHO04D010023	7.7e-15	82.8	101	55.4
GSVIVG01035656001	Vitis vinifera	HOM04D007714	ORTHO04D010023	7.7e-15	82.8	102	54.9
TCA.TCM_037855	Theobroma cacao	HOM04D007714	ORTHO04D010023	1.0e-14	82.4	98	61.2
Ciclev10010011m.g	Citrus clementina	HOM04D007714	ORTHO04D010023	1.3e-14	82.0	103	58.3
Brara.H00077	Brassica rapa	HOM04D007714	ORTHO04D010023	2.2e-14	81.3	102	54.9
Manes.03G022800	Manihot esculenta	HOM04D007714	ORTHO04D010023	2.9e-14	80.9	98	61.2
Bo3g184810	Brassica oleracea	HOM04D007714	ORTHO04D010023	3.8e-14	80.5	102	54.9
AL1G63250	Arabidopsis lyrata	HOM04D007714	ORTHO04D010023	5.0e-14	80.1	101	54.5
TCA.TCM_037158	Theobroma cacao	HOM04D007714	ORTHO04D010023	6.5e-14	79.7	106	54.7
Carubv10016355m.g	Capsella rubella	HOM04D007714	ORTHO04D010023	8.5e-14	79.3	101	54.5
Pbr016971.1.g	Pyrus bretschneideri	HOM04D007714	ORTHO04D010023	2.5e-13	77.8	95	54.7
Tp1g40890	Schrenkiella parvula	HOM04D007714	ORTHO04D010023	3.2e-13	77.4	104	55.8
AT3G13674	Arabidopsis thaliana	HOM04D007714	ORTHO04D010023	4.2e-13	77.0	102	53.9
Gorai.010G108700	Gossypium raimondii	HOM04D007714	ORTHO04D010023	5.5e-13	76.6	108	50.9
Brara.F00046	Brassica rapa	HOM04D007714	ORTHO04D010023	1.6e-12	75.1	101	53.5
Pbr014086.1.g	Pyrus bretschneideri	HOM04D001596	ORTHO04D001613	2.1e-12	74.7	99	50.5
Cla016772.g	Citrullus lanatus	HOM04D007714	ORTHO04D010023	2.7e-12	74.3	97	55.7
Peaxi162Scf00231g00326	Petunia axillaris	HOM04D007714	ORTHO04D010023	7.9e-12	72.8	95	53.7
TPR.G23496	Trifolium pratense	HOM04D007714	ORTHO04D010023	1.0e-11	72.4	98	51.0
Glyma.05G230000	Glycine max	HOM04D007714	ORTHO04D010023	1.4e-11	72.0	97	52.6
FVE30924	Fragaria vesca	HOM04D001596	ORTHO04D001613	1.4e-11	72.0	93	60.2
C.cajan_15672.g	Cajanus cajan	HOM04D007714	ORTHO04D010023	1.4e-11	72.0	96	53.1
Bo6g033330	Brassica oleracea	HOM04D000480	ORTHO04D000889	1.1e-10	68.9	91	51.6
Bv2_031980_zjpy	Beta vulgaris	HOM04D007714	ORTHO04D010023	1.5e-10	68.6	97	51.5
NNU_26142	Nelumbo nucifera	HOM04D007714	ORTHO04D010023	3.3e-10	67.4	95	49.5
LOC_Os06g22654	Oryza sativa ssp. japonica	HOM04D007714	ORTHO04D010023	3.3e-10	67.4	97	49.5
AH023385	Amaranthus hypochondriacus	HOM04D007714	ORTHO04D010023	4.4e-10	67.0	97	50.5
Ca_05963.g	Cicer arietinum	HOM04D007714	ORTHO04D010023	7.4e-10	66.2	92	50.0
LOC_Os02g17370	Oryza sativa ssp. japonica	HOM04D007714	ORTHO04D010023	1.7e-09	65.1	59	67.8
Gorai.001G006300	Gossypium raimondii	HOM04D007714	ORTHO04D010023	1.4e-08	62.0	98	53.1
TCA.TCM_006891	Theobroma cacao	HOM04D007296	ORTHO04D009476	2.4e-08	61.2	88	47.7
AL7G11290	Arabidopsis lyrata	HOM04D007296	ORTHO04D009476	2.4e-08	61.2	98	46.9
Ciclev10010763m.g	Citrus clementina	HOM04D007714	ORTHO04D010023	2.4e-08	61.2	55	65.5
Tp7g36570	Schrenkiella parvula	HOM04D007296	ORTHO04D009476	9.1e-08	59.3	98	45.9
COL.COLO4_25930	Corchorus olitorius	HOM04D007296	ORTHO04D009476	1.6e-07	58.5	97	44.3
Medtr8g103300	Medicago truncatula	HOM04D007714	ORTHO04D010023	1.6e-07	58.5	94	45.7
Carubv10007879m.g	Capsella rubella	HOM04D007296	ORTHO04D009476	2.0e-07	58.2	96	44.8
Cc02_g17570	Coffea canephora	HOM04D007296	ORTHO04D009476	3.5e-07	57.4	93	44.1
AT4G39300	Arabidopsis thaliana	HOM04D007296	ORTHO04D009476	5.9e-07	56.6	96	44.8
AUR62009312	Chenopodium quinoa	HOM04D007714	ORTHO04D010023	5.9e-07	56.6	94	44.7
RCO.g.29631.000044	Ricinus communis	HOM04D007699	ORTHO04D010022	1.3e-06	55.5	64	51.6
Brara.F03869	Brassica rapa	HOM04D007296	ORTHO04D009476	2.2e-06	54.7	90	46.7
Ciclev10029674m.g	Citrus clementina	HOM04D007296	ORTHO04D009476	2.2e-06	54.7	64	51.6
Gorai.005G243600	Gossypium raimondii	HOM04D007296	ORTHO04D009476	2.2e-06	54.7	41	63.4
Achn372441	Actinidia chinensis	HOM04D007296	ORTHO04D009476	3.8e-06	53.9	96	41.7
Bo7g119260	Brassica oleracea	HOM04D007296	ORTHO04D009476	5.0e-06	53.5	90	45.6
Zm00001d026589	Zea mays	HOM04D007296	ORTHO04D009476	5.0e-06	53.5	89	39.3
GSVIVG01031965001	Vitis vinifera	HOM04D007296	ORTHO04D009476	6.5e-06	53.1	97	43.3

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment