Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Eucgr.B01591	Eucalyptus grandis	HOM04D005103	ORTHO04D006503	8.2e-48	192.2	88	100.0
NNU_10699	Nelumbo nucifera	HOM04D005103	ORTHO04D006503	2.0e-33	144.4	80	81.2
Eucgr.G01888	Eucalyptus grandis	HOM04D005103	ORTHO04D006503	1.7e-32	141.4	80	85.0
Prupe.1G353600	Prunus persica	HOM04D005103	ORTHO04D006503	3.7e-32	140.2	80	78.8
Gorai.008G219400	Gossypium raimondii	HOM04D005103	ORTHO04D006503	3.7e-32	140.2	80	78.8
Cucsa.018330	Cucumis sativus L.	HOM04D005103	ORTHO04D006503	6.3e-32	139.4	80	78.8
MELO3C010523	Cucumis melo	HOM04D005103	ORTHO04D006503	6.3e-32	139.4	80	78.8
Cla023199.g	Citrullus lanatus	HOM04D005103	ORTHO04D006503	1.1e-31	138.7	80	77.5
PGSC0003DMG400001963	Solanum tuberosum	HOM04D005103	ORTHO04D006503	4.1e-31	136.7	80	77.5
Solyc08g075380.2	Solanum lycopersicum	HOM04D005103	ORTHO04D006503	4.1e-31	136.7	80	77.5
ATR0568G167	Amborella trichopoda	HOM04D005103	ORTHO04D006503	4.1e-31	136.7	86	73.3
Migut.A00528	Erythranthe guttata	HOM04D005103	ORTHO04D006503	9.1e-31	135.6	80	73.8
Peaxi162Scf00193g00717	Petunia axillaris	HOM04D005103	ORTHO04D006503	1.2e-30	135.2	80	76.2
Ciclev10012169m.g	Citrus clementina	HOM04D005103	ORTHO04D006503	1.5e-30	134.8	80	75.0
Ca_10671.g	Cicer arietinum	HOM04D005103	ORTHO04D006503	2.0e-30	134.4	80	75.0
TPR.G8985	Trifolium pratense	HOM04D005103	ORTHO04D006503	2.6e-30	134.0	80	75.0
FVE08650	Fragaria vesca	HOM04D005103	ORTHO04D006503	2.6e-30	134.0	82	76.8
CAN.G884.8	Capsicum annuum	HOM04D005103	ORTHO04D006503	2.6e-30	134.0	80	72.5
Medtr5g025560	Medicago truncatula	HOM04D005103	ORTHO04D006503	3.4e-30	133.7	80	75.0
RCO.g.29827.000118	Ricinus communis	HOM04D005103	ORTHO04D006503	4.5e-30	133.3	80	73.8
DCAR_000721	Daucus carota	HOM04D005103	ORTHO04D006503	4.5e-30	133.3	80	72.5
Eucgr.E01146	Eucalyptus grandis	HOM04D005103	ORTHO04D006503	7.7e-30	132.5	67	94.0
C.cajan_12445.g	Cajanus cajan	HOM04D005103	ORTHO04D006503	2.2e-29	131.0	80	73.8
Glyma.01G154100	Glycine max	HOM04D005103	ORTHO04D006503	3.8e-29	130.2	80	73.8
UGI.Scf00267.12948	Utricularia gibba	HOM04D005103	ORTHO04D006503	6.5e-29	129.4	80	72.5
LOC_Os06g49530	Oryza sativa ssp. japonica	HOM04D005103	ORTHO04D006503	1.4e-28	128.3	80	71.2
AH018779	Amaranthus hypochondriacus	HOM04D005103	ORTHO04D006503	2.5e-28	127.5	80	68.8
NNU_23076	Nelumbo nucifera	HOM04D005103	ORTHO04D006503	4.2e-28	126.7	80	72.5
Zm00001d014742	Zea mays	HOM04D005103	ORTHO04D006503	9.4e-28	125.6	80	70.0
Vradi11g07570	Vigna radiata var. radiata	HOM04D005103	ORTHO04D006503	1.2e-27	125.2	91	64.8
TCA.TCM_016697	Theobroma cacao	HOM04D005103	ORTHO04D006503	1.2e-27	125.2	80	73.8
COL.COLO4_16753	Corchorus olitorius	HOM04D005103	ORTHO04D006503	1.6e-27	124.8	80	73.8
CAN.G998.19	Capsicum annuum	HOM04D005103	ORTHO04D006503	1.6e-27	124.8	80	72.5
AL8G13440	Arabidopsis lyrata	HOM04D005103	ORTHO04D006503	3.6e-27	123.6	80	68.8
Manes.15G191300	Manihot esculenta	HOM04D005103	ORTHO04D006503	4.7e-27	123.2	80	71.2
AT5G45360	Arabidopsis thaliana	HOM04D005103	ORTHO04D006503	1.4e-26	121.7	80	67.5
Carubv10026775m.g	Capsella rubella	HOM04D005103	ORTHO04D006503	1.8e-26	121.3	80	66.2
GSVIVG01036874001	Vitis vinifera	HOM04D005103	ORTHO04D006503	3.0e-26	120.6	80	72.5
Glyma.11G090700	Glycine max	HOM04D005103	ORTHO04D006503	5.1e-26	119.8	80	68.8
Cpa.g.sc227.1	Carica papaya	HOM04D005103	ORTHO04D006503	6.7e-26	119.4	80	68.8
DCAR_004533	Daucus carota	HOM04D005103	ORTHO04D006503	2.6e-25	117.5	80	65.0
Araip.23LH0	Arachis ipaensis	HOM04D005103	ORTHO04D006503	7.4e-25	115.9	68	77.9
Araip.0P7C7	Arachis ipaensis	HOM04D005103	ORTHO04D006503	7.4e-25	115.9	68	77.9
PAB00014126	Picea abies	HOM04D005103	ORTHO04D006503	7.4e-25	115.9	80	63.8
Peaxi162Scf00045g00731	Petunia axillaris	HOM04D005103	ORTHO04D006503	1.3e-24	115.2	66	80.3
Achn181581	Actinidia chinensis	HOM04D005103	ORTHO04D006503	1.7e-24	114.8	67	79.1
Mapoly0004s0051	Marchantia polymorpha	HOM04D005103	ORTHO04D006503	2.2e-24	114.4	80	57.5
Cc08_g05810	Coffea canephora	HOM04D005103	ORTHO04D006503	3.7e-24	113.6	68	76.5
Tp2g10310	Schrenkiella parvula	HOM04D005103	ORTHO04D006503	1.1e-23	112.1	80	62.5
Pp3c9_17990	Physcomitrium patens	HOM04D005103	ORTHO04D006503	2.4e-23	110.9	80	60.0
THA.LOC104811099	Tarenaya hassleriana	HOM04D005103	ORTHO04D006503	4.1e-23	110.2	80	62.5
PAB00056031	Picea abies	HOM04D005103	ORTHO04D006503	7.0e-23	109.4	80	60.0
Potri.004G236200	Populus trichocarpa	HOM04D005103	ORTHO04D006503	9.1e-23	109.0	66	75.8
PGSC0003DMG400018477	Solanum tuberosum	HOM04D005103	ORTHO04D006503	9.1e-23	109.0	65	75.4
AUR62010482	Chenopodium quinoa	HOM04D005103	ORTHO04D006503	1.0e-21	105.5	66	74.2
Bv5_102400_mnei	Beta vulgaris	HOM04D005103	ORTHO04D006503	1.0e-21	105.5	80	61.2
AUR62030411	Chenopodium quinoa	HOM04D005103	ORTHO04D006503	2.9e-21	104.0	66	72.7
Araip.7VS46	Arachis ipaensis	HOM04D005103	ORTHO04D006503	2.9e-21	104.0	67	67.2
SMO353G0174	Selaginella moellendorffii	HOM04D005103	ORTHO04D006503	2.5e-20	100.9	80	51.2
Brara.F03689	Brassica rapa	HOM04D005103	ORTHO04D006503	6.5e-13	76.3	80	43.8
Bo7g071500	Brassica oleracea	HOM04D005103	ORTHO04D006503	6.5e-13	76.3	80	43.8
Bo9g061410	Brassica oleracea	HOM04D005103	ORTHO04D006503	5.2e-10	66.6	80	41.2
Brara.I01887	Brassica rapa	HOM04D005103	ORTHO04D006503	5.2e-10	66.6	80	41.2
MCO16G622	Micromonas commoda	HOM04D005103	ORTHO04D006503	1.5e-09	65.1	84	42.9
ZJU.LOC107423998	Ziziphus jujuba	HOM04D005103	ORTHO04D006503	2.2e-08	61.2	80	42.5
Araip.U2JFG	Arachis ipaensis	HOM04D005103	ORTHO04D006503	4.1e-07	57.0	41	58.5
Vradi07g11400	Vigna radiata var. radiata	HOM04D001505	ORTHO04D001157	1.6e-06	55.1	43	53.5

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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