Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Cre03.g194300	Chlamydomonas reinhardtii	HOM04D006773	ORTHO04D008791	3.6e-183	644.0	406	100.0
Mapoly0004s0255	Marchantia polymorpha	HOM04D006773	ORTHO04D008791	9.2e-62	240.7	348	39.7
PAB00032640	Picea abies	HOM04D006773	ORTHO04D008791	1.2e-56	223.8	350	37.4
Pp3c14_3830	Physcomitrium patens	HOM04D006773	ORTHO04D008791	2.2e-55	219.5	355	37.2
SMO358G0371	Selaginella moellendorffii	HOM04D006773	ORTHO04D008791	3.8e-55	218.8	352	38.9
MCO14G155	Micromonas commoda	HOM04D006773	ORTHO04D008791	1.9e-54	216.5	363	39.1
Bv5_098020_fxrn	Beta vulgaris	HOM04D006773	ORTHO04D008791	5.1e-44	181.8	363	33.3
FVE32257	Fragaria vesca	HOM04D006773	ORTHO04D008791	6.2e-42	174.9	364	32.4
Araip.LC3XS	Arachis ipaensis	HOM04D006773	ORTHO04D008791	5.3e-41	171.8	358	32.4
TCA.TCM_016038	Theobroma cacao	HOM04D006773	ORTHO04D008791	1.2e-40	170.6	358	32.1
ZJU.LOC107435436	Ziziphus jujuba	HOM04D006773	ORTHO04D008791	2.0e-40	169.9	364	32.1
CAN.G1394.30	Capsicum annuum	HOM04D006773	ORTHO04D008791	2.0e-40	169.9	363	32.5
Prupe.5G076400	Prunus persica	HOM04D006773	ORTHO04D008791	2.0e-40	169.9	364	31.9
Glyma.13G075600	Glycine max	HOM04D006773	ORTHO04D008791	2.6e-40	169.5	362	32.9
Gorai.003G168800	Gossypium raimondii	HOM04D006773	ORTHO04D008791	1.3e-39	167.2	360	32.2
Cpa.g.sc29.104	Carica papaya	HOM04D006773	ORTHO04D008791	1.3e-39	167.2	357	32.2
Solyc08g007440.1	Solanum lycopersicum	HOM04D006773	ORTHO04D008791	1.3e-39	167.2	363	31.7
AT1G62730	Arabidopsis thaliana	HOM04D006773	ORTHO04D008791	2.2e-39	166.4	360	31.9
Vradi08g18290	Vigna radiata var. radiata	HOM04D006773	ORTHO04D008791	2.9e-39	166.0	357	33.3
Achn089511	Actinidia chinensis	HOM04D006773	ORTHO04D008791	2.9e-39	166.0	364	32.1
Manes.02G035200	Manihot esculenta	HOM04D006773	ORTHO04D008791	3.8e-39	165.6	359	31.8
Potri.001G119700	Populus trichocarpa	HOM04D006773	ORTHO04D008791	4.9e-39	165.2	358	31.8
C.cajan_38373.g	Cajanus cajan	HOM04D006773	ORTHO04D008791	6.4e-39	164.9	362	32.6
MELO3C013973	Cucumis melo	HOM04D006773	ORTHO04D008791	6.4e-39	164.9	358	31.6
HBR2463G044	Hevea brasiliensis	HOM04D006773	ORTHO04D008791	8.4e-39	164.5	358	32.1
PGSC0003DMG400012507	Solanum tuberosum	HOM04D006773	ORTHO04D008791	1.1e-38	164.1	357	31.7
AL2G13060	Arabidopsis lyrata	HOM04D006773	ORTHO04D008791	1.1e-38	164.1	360	31.7
NNU_05734	Nelumbo nucifera	HOM04D006773	ORTHO04D008791	1.4e-38	163.7	362	31.5
TPR.G25884	Trifolium pratense	HOM04D006773	ORTHO04D008791	1.9e-38	163.3	362	31.5
Medtr5g012060	Medicago truncatula	HOM04D006773	ORTHO04D008791	2.4e-38	162.9	362	31.5
THA.LOC104818444	Tarenaya hassleriana	HOM04D006773	ORTHO04D008791	2.4e-38	162.9	361	31.6
LOC_Os06g01470	Oryza sativa ssp. japonica	HOM04D006773	ORTHO04D008791	5.4e-38	161.8	361	31.9
Carubv10020490m.g	Capsella rubella	HOM04D006773	ORTHO04D008791	1.2e-37	160.6	370	31.9
Cc08_g13030	Coffea canephora	HOM04D006773	ORTHO04D008791	2.1e-37	159.8	363	31.7
Ciclev10024149m.g	Citrus clementina	HOM04D006773	ORTHO04D008791	2.7e-37	159.5	358	31.8
Ca_02366.g	Cicer arietinum	HOM04D006773	ORTHO04D008791	3.5e-37	159.1	362	30.9
RCO.g.30190.000229	Ricinus communis	HOM04D006773	ORTHO04D008791	3.5e-37	159.1	374	30.5
Bo9g036900	Brassica oleracea	HOM04D006773	ORTHO04D008791	4.6e-37	158.7	360	30.6
Cla005679.g	Citrullus lanatus	HOM04D006773	ORTHO04D008791	6.0e-37	158.3	359	31.5
Brara.I01433	Brassica rapa	HOM04D006773	ORTHO04D008791	7.9e-37	157.9	360	30.6
Zm00001d035881	Zea mays	HOM04D006773	ORTHO04D008791	1.0e-36	157.5	364	31.3
DCAR_021556	Daucus carota	HOM04D006773	ORTHO04D008791	1.3e-36	157.1	357	30.5
Tp2g01910	Schrenkiella parvula	HOM04D006773	ORTHO04D008791	3.9e-36	155.6	361	29.9
Eucgr.E00462	Eucalyptus grandis	HOM04D006773	ORTHO04D008791	5.1e-36	155.2	368	31.5
ATR0789G127	Amborella trichopoda	HOM04D006773	ORTHO04D008791	1.1e-35	154.1	357	30.8
COL.COLO4_37229	Corchorus olitorius	HOM04D000859	ORTHO04D000762	2.5e-35	152.9	348	31.3
Achn002671	Actinidia chinensis	HOM04D006773	ORTHO04D008791	2.5e-35	152.9	359	31.8
UGI.Scf00037.4121	Utricularia gibba	HOM04D006773	ORTHO04D008791	8.1e-34	147.9	359	30.6
Migut.E01682	Erythranthe guttata	HOM04D006773	ORTHO04D008791	8.4e-31	137.9	362	28.7
Migut.E00967	Erythranthe guttata	HOM04D006773	ORTHO04D008791	1.1e-30	137.5	362	28.5
Zm00001d035879	Zea mays	HOM04D006773	ORTHO04D008791	8.7e-28	127.9	323	29.4
GSVIVG01000849001	Vitis vinifera	HOM04D006773	ORTHO04D008791	8.7e-28	127.9	319	31.0
Zm00001d053084	Zea mays	HOM04D006773	ORTHO04D008791	2.5e-27	126.3	317	29.7
AUR62010133	Chenopodium quinoa	HOM04D006773	ORTHO04D008791	4.8e-26	122.1	314	30.3
AH018553	Amaranthus hypochondriacus	HOM04D006773	ORTHO04D008791	1.4e-22	110.5	287	30.7
Peaxi162Scf00102g01130	Petunia axillaris	HOM04D006773	ORTHO04D008791	1.0e-20	104.4	352	27.6
ATR0789G122	Amborella trichopoda	HOM04D006773	ORTHO04D008791	1.1e-19	100.9	198	35.4
MDO.mRNA.g.1300.1	Malus domestica	HOM04D006773	ORTHO04D008791	1.1e-19	100.9	167	37.7
Zm00001d036080	Zea mays	HOM04D006773	ORTHO04D008791	5.5e-14	82.0	357	23.2
Cucsa.320570	Cucumis sativus L.	HOM04D006773	ORTHO04D008791	2.1e-13	80.1	92	39.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment