Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Cre02.g079400	Chlamydomonas reinhardtii	HOM04D002200	ORTHO04D009141	1.0e-74	282.3	147	100.0
AL6G15620	Arabidopsis lyrata	HOM04D002200	ORTHO04D004317	3.0e-10	68.2	82	45.1
MCO07G708	Micromonas commoda	HOM04D002200	ORTHO04D004317	1.1e-09	66.2	81	42.0
FVE20080	Fragaria vesca	HOM04D002200	ORTHO04D004317	2.1e-08	62.0	106	34.0
Prupe.4G106000	Prunus persica	HOM04D002200	ORTHO04D004317	2.8e-08	61.6	87	37.9
MCO07G405	Micromonas commoda	HOM04D000189	ORTHO04D001371	6.2e-08	60.5	97	38.1
Medtr1g056520	Medicago truncatula	HOM04D000108	ORTHO04D007368	8.1e-08	60.1	96	40.6
MELO3C016321	Cucumis melo	HOM04D002200	ORTHO04D004317	8.1e-08	60.1	79	39.2
THA.LOC104806210	Tarenaya hassleriana	HOM04D002200	ORTHO04D004317	8.1e-08	60.1	75	40.0
C.cajan_02744.g	Cajanus cajan	HOM04D000108	ORTHO04D009141	1.1e-07	59.7	90	35.6
Cucsa.107130	Cucumis sativus L.	HOM04D002200	ORTHO04D004317	1.4e-07	59.3	101	33.7
Medtr1g045510	Medicago truncatula	HOM04D000108	ORTHO04D009141	1.4e-07	59.3	88	37.5
Cla010935.g	Citrullus lanatus	HOM04D002200	ORTHO04D004317	1.8e-07	58.9	87	37.9
Cpa.g.sc192.5	Carica papaya	HOM04D002200	ORTHO04D004317	1.8e-07	58.9	75	41.3
LOC_Os05g13650	Oryza sativa ssp. japonica	HOM04D000108	ORTHO04D000100	2.4e-07	58.5	76	42.1
Migut.M00570	Erythranthe guttata	HOM04D002200	ORTHO04D004317	2.4e-07	58.5	92	39.1
ATR0680G306	Amborella trichopoda	HOM04D002200	ORTHO04D004317	2.4e-07	58.5	98	35.7
LOC_Os05g13630	Oryza sativa ssp. japonica	HOM04D000108	ORTHO04D000100	3.1e-07	58.2	77	39.0
AL7G34450	Arabidopsis lyrata	HOM04D002200	ORTHO04D004317	3.1e-07	58.2	75	41.3
AT4G19610	Arabidopsis thaliana	HOM04D002200	ORTHO04D004317	3.1e-07	58.2	75	40.0
TPR.G23968	Trifolium pratense	HOM04D000108	ORTHO04D009141	4.0e-07	57.8	89	38.2
Migut.M00563	Erythranthe guttata	HOM04D002200	ORTHO04D004317	5.2e-07	57.4	90	37.8
Migut.M00474	Erythranthe guttata	HOM04D002200	ORTHO04D004317	5.2e-07	57.4	90	37.8
TPR.G6171	Trifolium pratense	HOM04D002200	ORTHO04D004317	5.2e-07	57.4	99	32.3
MDO.mRNA.g.5855.2	Malus domestica	HOM04D002200	ORTHO04D004317	5.2e-07	57.4	112	33.0
Medtr7g094670	Medicago truncatula	HOM04D001387	ORTHO04D002743	6.8e-07	57.0	73	38.4
Vradi06g11360	Vigna radiata var. radiata	HOM04D002200	ORTHO04D004317	6.8e-07	57.0	75	38.7
Ciclev10000238m.g	Citrus clementina	HOM04D004393	ORTHO04D005821	6.8e-07	57.0	94	38.3
DCAR_007039	Daucus carota	HOM04D002200	ORTHO04D004317	6.8e-07	57.0	91	31.9
Pbr021392.1.g	Pyrus bretschneideri	HOM04D002200	ORTHO04D004317	8.9e-07	56.6	115	33.0
Ca_07366.g	Cicer arietinum	HOM04D002200	ORTHO04D004317	8.9e-07	56.6	73	37.0
Migut.O00375	Erythranthe guttata	HOM04D002200	ORTHO04D004317	8.9e-07	56.6	86	37.2
PGSC0003DMG400007320	Solanum tuberosum	HOM04D002200	ORTHO04D004317	8.9e-07	56.6	97	35.1
Solyc02g081940.2	Solanum lycopersicum	HOM04D002200	ORTHO04D004317	8.9e-07	56.6	97	35.1
NNU_23460	Nelumbo nucifera	HOM04D002200	ORTHO04D004317	8.9e-07	56.6	96	36.5
UGI.Scf00882.19445	Utricularia gibba	HOM04D002200	ORTHO04D004317	8.9e-07	56.6	87	37.9
Migut.J00689	Erythranthe guttata	HOM04D000108	ORTHO04D007368	1.2e-06	56.2	94	39.4
AUR62039584	Chenopodium quinoa	HOM04D002200	ORTHO04D004317	1.5e-06	55.8	83	36.1
UGI.Scf00430.21458	Utricularia gibba	HOM04D000108	ORTHO04D007368	1.5e-06	55.8	103	37.9
Ca_00865.g	Cicer arietinum	HOM04D000108	ORTHO04D007368	1.5e-06	55.8	95	42.1
Brara.A01051	Brassica rapa	HOM04D002200	ORTHO04D004317	2.0e-06	55.5	78	38.5
Glyma.10G134100	Glycine max	HOM04D000108	ORTHO04D009141	2.0e-06	55.5	92	34.8
Bo1g021690	Brassica oleracea	HOM04D002200	ORTHO04D004317	2.0e-06	55.5	78	38.5
Migut.B01297	Erythranthe guttata	HOM04D002200	ORTHO04D004317	2.0e-06	55.5	92	37.0
TCA.TCM_029320	Theobroma cacao	HOM04D002200	ORTHO04D004317	2.0e-06	55.5	91	35.2
UGI.Scf00189.10964	Utricularia gibba	HOM04D000108	ORTHO04D003491	2.6e-06	55.1	86	38.4
Migut.M00477	Erythranthe guttata	HOM04D002200	ORTHO04D004317	2.6e-06	55.1	87	37.9
HBR0349G080	Hevea brasiliensis	HOM04D000108	ORTHO04D009141	2.6e-06	55.1	80	38.8
Achn160541	Actinidia chinensis	HOM04D002200	ORTHO04D004317	2.6e-06	55.1	91	30.8
PGSC0003DMG400021364	Solanum tuberosum	HOM04D000108	ORTHO04D007368	2.6e-06	55.1	82	40.2
Carubv10004134m.g	Capsella rubella	HOM04D002200	ORTHO04D004317	3.4e-06	54.7	75	38.7
C.cajan_03138.g	Cajanus cajan	HOM04D000108	ORTHO04D007368	3.4e-06	54.7	99	39.4
Potri.003G149600	Populus trichocarpa	HOM04D002200	ORTHO04D004317	3.4e-06	54.7	102	31.4
C.cajan_33517.g	Cajanus cajan	HOM04D002200	ORTHO04D004317	3.4e-06	54.7	75	36.0
Ca_20443.g	Cicer arietinum	HOM04D000108	ORTHO04D009141	3.4e-06	54.7	79	36.7
Ciclev10005487m.g	Citrus clementina	HOM04D000108	ORTHO04D009141	3.4e-06	54.7	79	36.7
Medtr7g094660	Medicago truncatula	HOM04D002200	ORTHO04D004317	3.4e-06	54.7	85	34.1
Peaxi162Scf00036g01624	Petunia axillaris	HOM04D002200	ORTHO04D004317	3.4e-06	54.7	97	35.1
Ca_08797.g	Cicer arietinum	HOM04D000108	ORTHO04D001371	4.4e-06	54.3	121	33.9
Glyma.20G082800	Glycine max	HOM04D000108	ORTHO04D009141	4.4e-06	54.3	79	35.4
ZJU.LOC107405344	Ziziphus jujuba	HOM04D002200	ORTHO04D004317	4.4e-06	54.3	91	35.2
ZJU.LOC107434367	Ziziphus jujuba	HOM04D002200	ORTHO04D004317	4.4e-06	54.3	91	35.2
ZJU.LOC107408896	Ziziphus jujuba	HOM04D002200	ORTHO04D004317	4.4e-06	54.3	91	35.2
TCA.TCM_021006	Theobroma cacao	HOM04D000108	ORTHO04D009141	5.8e-06	53.9	79	36.7
Cucsa.255820	Cucumis sativus L.	HOM04D000108	ORTHO04D009141	5.8e-06	53.9	91	36.3
Ciclev10017571m.g	Citrus clementina	HOM04D002200	ORTHO04D004317	5.8e-06	53.9	75	38.7
RCO.g.30008.000019	Ricinus communis	HOM04D000108	ORTHO04D009141	5.8e-06	53.9	79	38.0
ATR0048G013	Amborella trichopoda	HOM04D000108	ORTHO04D001371	5.8e-06	53.9	87	34.5
Medtr7g106440	Medicago truncatula	HOM04D000108	ORTHO04D007368	5.8e-06	53.9	93	41.9
SMO301G0078	Selaginella moellendorffii	HOM04D002200	ORTHO04D004317	5.8e-06	53.9	100	34.0
Cpa.g.sc104.10	Carica papaya	HOM04D000108	ORTHO04D007368	5.8e-06	53.9	82	40.2
Cpa.g.sc59.2	Carica papaya	HOM04D000108	ORTHO04D009141	5.8e-06	53.9	133	29.3
Prupe.1G048800	Prunus persica	HOM04D000108	ORTHO04D009141	5.8e-06	53.9	79	35.4
Eucgr.K02063	Eucalyptus grandis	HOM04D002200	ORTHO04D004317	7.6e-06	53.5	95	31.6
Manes.08G008000	Manihot esculenta	HOM04D000108	ORTHO04D001371	7.6e-06	53.5	92	34.8
Cla023036.g	Citrullus lanatus	HOM04D000108	ORTHO04D003491	7.6e-06	53.5	129	32.6
Brara.I02514	Brassica rapa	HOM04D000108	ORTHO04D003491	7.6e-06	53.5	80	37.5
LOC_Os05g13620	Oryza sativa ssp. japonica	HOM04D000108	ORTHO04D000100	7.6e-06	53.5	76	36.8
FVE09746	Fragaria vesca	HOM04D000108	ORTHO04D001371	7.6e-06	53.5	99	35.4
Cla017613.g	Citrullus lanatus	HOM04D000108	ORTHO04D007368	7.6e-06	53.5	103	35.9
Medtr7g096260	Medicago truncatula	HOM04D002200	ORTHO04D004317	7.6e-06	53.5	79	38.0
AH007041	Amaranthus hypochondriacus	HOM04D002200	ORTHO04D004317	7.6e-06	53.5	88	37.5
Cla017815.g	Citrullus lanatus	HOM04D000108	ORTHO04D001371	9.9e-06	53.1	94	34.0
ZJU.LOC107407744	Ziziphus jujuba	HOM04D000108	ORTHO04D007368	9.9e-06	53.1	82	40.2
ZJU.LOC107433632	Ziziphus jujuba	HOM04D000108	ORTHO04D007368	9.9e-06	53.1	82	40.2
TCA.TCM_022982	Theobroma cacao	HOM04D000108	ORTHO04D007368	9.9e-06	53.1	84	41.7
ZJU.LOC107406868	Ziziphus jujuba	HOM04D000108	ORTHO04D007368	9.9e-06	53.1	82	40.2
Medtr2g018390	Medicago truncatula	HOM04D002200	ORTHO04D004317	9.9e-06	53.1	73	32.9
Prupe.6G235900	Prunus persica	HOM04D000108	ORTHO04D001371	9.9e-06	53.1	94	35.1
Bv7_177110_dcmt	Beta vulgaris	HOM04D000108	ORTHO04D001371	9.9e-06	53.1	90	34.4
TPR.G31290	Trifolium pratense	HOM04D000108	ORTHO04D007368	9.9e-06	53.1	82	41.5
Peaxi162Scf00582g00611	Petunia axillaris	HOM04D000108	ORTHO04D007368	9.9e-06	53.1	88	38.6
Cc09_g04940	Coffea canephora	HOM04D002200	ORTHO04D004317	9.9e-06	53.1	81	38.3
GSVIVG01012163001	Vitis vinifera	HOM04D002200	ORTHO04D004317	9.9e-06	53.1	89	33.7
Manes.13G073400	Manihot esculenta	HOM04D002200	ORTHO04D004317	9.9e-06	53.1	102	30.4
COL.COLO4_30935	Corchorus olitorius	HOM04D002200	ORTHO04D004317	9.9e-06	53.1	98	34.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment