Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Cpa.g.sc80.68	Carica papaya	HOM04D002321	ORTHO04D002274	4.2e-48	193.4	100	100.0
TCA.TCM_031520	Theobroma cacao	HOM04D002321	ORTHO04D002274	2.0e-18	94.7	83	59.0
NNU_25978	Nelumbo nucifera	HOM04D002321	ORTHO04D002274	2.7e-15	84.3	87	54.0
FVE17153	Fragaria vesca	HOM04D002321	ORTHO04D002274	2.7e-15	84.3	83	55.4
Gorai.002G069700	Gossypium raimondii	HOM04D002321	ORTHO04D002274	2.2e-12	74.7	51	70.6
Achn163511	Actinidia chinensis	HOM04D002321	ORTHO04D002274	8.2e-12	72.8	70	57.1
COL.COLO4_27176	Corchorus olitorius	HOM04D002321	ORTHO04D002274	8.2e-12	72.8	46	73.9
Ca_06863.g	Cicer arietinum	HOM04D002321	ORTHO04D002274	1.1e-11	72.4	88	53.4
MDO.mRNA.g.879.15	Malus domestica	HOM04D002321	ORTHO04D002274	1.2e-10	68.9	74	51.4
Prupe.4G180600	Prunus persica	HOM04D002321	ORTHO04D002274	1.5e-10	68.6	76	51.3
Gorai.009G386100	Gossypium raimondii	HOM04D002321	ORTHO04D002274	2.6e-10	67.8	74	51.4
Medtr2g085330	Medicago truncatula	HOM04D002321	ORTHO04D002274	4.5e-10	67.0	76	50.0
Medtr4g132200	Medicago truncatula	HOM04D002321	ORTHO04D002274	5.9e-10	66.6	87	47.1
Tp7g25440	Schrenkiella parvula	HOM04D002321	ORTHO04D002274	1.3e-09	65.5	46	69.6
Araip.FZ182	Arachis ipaensis	HOM04D002321	ORTHO04D002274	2.2e-09	64.7	85	51.8
RCO.g.28469.000004	Ricinus communis	HOM04D002321	ORTHO04D002274	6.5e-09	63.2	59	57.6
Pbr017416.1.g	Pyrus bretschneideri	HOM04D002321	ORTHO04D002274	6.5e-09	63.2	67	52.2
ZJU.LOC107422439	Ziziphus jujuba	HOM04D002321	ORTHO04D002274	1.1e-08	62.4	59	50.8
Brara.K00084	Brassica rapa	HOM04D002321	ORTHO04D002274	1.4e-08	62.0	54	61.1
Pbr038314.1.g	Pyrus bretschneideri	HOM04D002321	ORTHO04D002274	2.5e-08	61.2	73	50.7
Potri.001G399400	Populus trichocarpa	HOM04D002321	ORTHO04D002274	3.2e-08	60.8	49	57.1
Gorai.009G386900	Gossypium raimondii	HOM04D002321	ORTHO04D002274	4.2e-08	60.5	74	51.4
Bo1g049430	Brassica oleracea	HOM04D002321	ORTHO04D002274	5.5e-08	60.1	46	65.2
UGI.Scf00438.15893	Utricularia gibba	HOM04D002321	ORTHO04D002274	1.6e-07	58.5	84	48.8
Eucgr.F01145	Eucalyptus grandis	HOM04D002321	ORTHO04D002274	2.7e-07	57.8	75	44.0
AL7G25270	Arabidopsis lyrata	HOM04D002321	ORTHO04D002274	3.6e-07	57.4	75	52.0
Bo7g111460	Brassica oleracea	HOM04D002321	ORTHO04D002274	7.9e-07	56.2	46	60.9
Gorai.009G386800	Gossypium raimondii	HOM04D002321	ORTHO04D002274	1.0e-06	55.8	87	43.7
Brara.A01720	Brassica rapa	HOM04D002321	ORTHO04D002274	1.0e-06	55.8	45	64.4
Carubv10004404m.g	Capsella rubella	HOM04D002321	ORTHO04D002274	1.8e-06	55.1	39	66.7
Glyma.06G240500	Glycine max	HOM04D002321	ORTHO04D002274	3.0e-06	54.3	89	46.1
ATR0737G090	Amborella trichopoda	HOM04D002321	ORTHO04D002274	3.9e-06	53.9	66	40.9
C.cajan_30103.g	Cajanus cajan	HOM04D002321	ORTHO04D002274	5.1e-06	53.5	87	43.7
Migut.H01943	Erythranthe guttata	HOM04D002321	ORTHO04D002274	6.7e-06	53.1	58	43.1
Peaxi162Scf00069g01513	Petunia axillaris	HOM04D002321	ORTHO04D002274	8.8e-06	52.8	58	56.9
AT4G27500	Arabidopsis thaliana	HOM04D002321	ORTHO04D002274	8.8e-06	52.8	38	71.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment