Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Cc01_g00150	Coffea canephora	HOM04D007681	ORTHO04D009766	2.1e-77	291.2	145	100.0
GSVIVG01025476001	Vitis vinifera	HOM04D007681	ORTHO04D009766	6.9e-36	153.3	141	61.7
PGSC0003DMG402032165	Solanum tuberosum	HOM04D007681	ORTHO04D009766	6.5e-34	146.7	145	58.6
CAN.G1834.12	Capsicum annuum	HOM04D007681	ORTHO04D009766	1.2e-32	142.5	145	55.2
Peaxi162Scf00705g00062	Petunia axillaris	HOM04D007681	ORTHO04D009766	3.6e-32	141.0	140	57.9
Solyc01g005530.2	Solanum lycopersicum	HOM04D007681	ORTHO04D009766	7.9e-32	139.8	145	53.8
ZJU.LOC107415059	Ziziphus jujuba	HOM04D007681	ORTHO04D009766	7.4e-30	133.3	142	57.0
Manes.15G109800	Manihot esculenta	HOM04D007681	ORTHO04D009766	2.2e-26	121.7	152	49.3
Potri.001G003300	Populus trichocarpa	HOM04D007681	ORTHO04D009766	3.8e-26	120.9	146	52.1
Ciclev10017000m.g	Citrus clementina	HOM04D007681	ORTHO04D009766	5.0e-26	120.6	160	48.8
DCAR_032194	Daucus carota	HOM04D007681	ORTHO04D009766	8.5e-26	119.8	128	53.9
Potri.003G221800	Populus trichocarpa	HOM04D007681	ORTHO04D009766	9.4e-25	116.3	145	51.0
NNU_23613	Nelumbo nucifera	HOM04D007681	ORTHO04D009766	2.1e-24	115.2	143	52.4
NNU_03038	Nelumbo nucifera	HOM04D007681	ORTHO04D009766	3.9e-23	110.9	149	47.7
Prupe.6G002800	Prunus persica	HOM04D007681	ORTHO04D009766	4.4e-22	107.5	121	54.5
THA.LOC104822699	Tarenaya hassleriana	HOM04D007681	ORTHO04D009766	2.2e-21	105.1	152	40.8
THA.LOC104815671	Tarenaya hassleriana	HOM04D007681	ORTHO04D009766	1.8e-20	102.1	154	44.8
Bv4_070880_rshz	Beta vulgaris	HOM04D007681	ORTHO04D009766	2.4e-20	101.7	156	39.7
Migut.D02571	Erythranthe guttata	HOM04D007681	ORTHO04D009766	4.1e-20	100.9	146	48.6
Migut.D02593	Erythranthe guttata	HOM04D007681	ORTHO04D009766	5.3e-20	100.5	147	46.9
Carubv10016399m.g	Capsella rubella	HOM04D007681	ORTHO04D009766	2.2e-18	95.1	166	42.8
Eucgr.J01763	Eucalyptus grandis	HOM04D007681	ORTHO04D009766	6.5e-18	93.6	141	46.8
Brara.E02769	Brassica rapa	HOM04D007681	ORTHO04D009766	1.1e-17	92.8	163	42.9
MELO3C015574	Cucumis melo	HOM04D007681	ORTHO04D009766	4.2e-17	90.9	145	43.4
Cucsa.142270	Cucumis sativus L.	HOM04D007681	ORTHO04D009766	4.2e-17	90.9	145	45.5
Tp3g11690	Schrenkiella parvula	HOM04D007681	ORTHO04D009766	8.0e-16	86.7	174	37.9
Pbr000765.1.g	Pyrus bretschneideri	HOM04D007681	ORTHO04D009766	1.0e-15	86.3	129	41.9
THA.LOC104810320	Tarenaya hassleriana	HOM04D007681	ORTHO04D009766	3.3e-14	81.3	153	39.9
Migut.N00543	Erythranthe guttata	HOM04D007681	ORTHO04D009766	6.3e-13	77.0	137	40.1
Bo3g065570	Brassica oleracea	HOM04D007681	ORTHO04D009766	7.0e-12	73.6	146	36.3
AT3G13480	Arabidopsis thaliana	HOM04D007681	ORTHO04D009766	9.1e-12	73.2	167	35.9
Cpa.g.sc119.37	Carica papaya	HOM04D007681	ORTHO04D009766	2.0e-11	72.0	113	46.9
AL3G25390	Arabidopsis lyrata	HOM04D007681	ORTHO04D009766	5.9e-11	70.5	165	34.5
RCO.g.28842.000038	Ricinus communis	HOM04D007681	ORTHO04D009766	2.9e-10	68.2	123	41.5
HBR2759G037	Hevea brasiliensis	HOM04D007681	ORTHO04D009766	3.8e-10	67.8	147	35.4
Bo5g132460	Brassica oleracea	HOM04D007681	ORTHO04D009766	6.5e-10	67.0	149	39.6
FVE01599	Fragaria vesca	HOM04D001284	ORTHO04D006322	3.2e-09	64.7	105	43.8
GSVIVG01034579001	Vitis vinifera	HOM04D004471	ORTHO04D005463	6.1e-08	60.5	147	35.4
Bo1g138280	Brassica oleracea	HOM04D007681	ORTHO04D009766	1.0e-07	59.7	155	33.5
Eucgr.F04191	Eucalyptus grandis	HOM04D004471	ORTHO04D005463	1.4e-07	59.3	148	35.8
AL1G63490	Arabidopsis lyrata	HOM04D007681	ORTHO04D009766	4.0e-07	57.8	81	43.2
Brara.A03257	Brassica rapa	HOM04D007681	ORTHO04D009766	5.2e-07	57.4	153	33.3
Carubv10011122m.g	Capsella rubella	HOM04D007681	ORTHO04D009766	1.5e-06	55.8	84	41.7
HBR2413G022	Hevea brasiliensis	HOM04D004471	ORTHO04D005463	2.0e-06	55.5	148	33.8
AT1G55475	Arabidopsis thaliana	HOM04D007681	ORTHO04D009766	2.6e-06	55.1	81	40.7
Gorai.009G258400	Gossypium raimondii	HOM04D004471	ORTHO04D005463	2.6e-06	55.1	152	31.6
Achn388271	Actinidia chinensis	HOM04D004471	ORTHO04D005463	5.7e-06	53.9	149	33.6
LOC_Os03g58090	Oryza sativa ssp. japonica	HOM04D014568	ORTHO04D009766	5.7e-06	53.9	61	49.2

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment