Interactive Phylogenetics Module

Gene Id
Cc01_g00030

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g00030 Coffea canephora HOM04D003964 ORTHO04D005036 0.0e+00 3831.2 1962 100.0
CAN.G1237.43 Capsicum annuum HOM04D003964 ORTHO04D005036 0.0e+00 2538.8 2004 67.7
Solyc04g039950.2 Solanum lycopersicum HOM04D003964 ORTHO04D005036 0.0e+00 2501.1 1999 66.9
Migut.L00381 Erythranthe guttata HOM04D003964 ORTHO04D005036 0.0e+00 2453.3 1998 66.5
Manes.14G121800 Manihot esculenta HOM04D003964 ORTHO04D005036 0.0e+00 2409.4 2009 65.0
Ciclev10014014m.g Citrus clementina HOM04D003964 ORTHO04D005036 0.0e+00 2405.6 2011 64.8
ZJU.LOC107415060 Ziziphus jujuba HOM04D003964 ORTHO04D005036 0.0e+00 2398.2 2004 64.8
TCA.TCM_024228 Theobroma cacao HOM04D003964 ORTHO04D005036 0.0e+00 2397.5 2014 64.6
HBR0644G002 Hevea brasiliensis HOM04D003964 ORTHO04D005036 0.0e+00 2389.8 2013 65.0
Potri.001G004200 Populus trichocarpa HOM04D003964 ORTHO04D005036 0.0e+00 2380.9 2011 64.6
Achn244981 Actinidia chinensis HOM04D003964 ORTHO04D005036 0.0e+00 2372.8 1992 64.6
DCAR_029576 Daucus carota HOM04D003964 ORTHO04D005036 0.0e+00 2353.2 2007 61.7
Potri.003G220800 Populus trichocarpa HOM04D003964 ORTHO04D005036 0.0e+00 2349.3 2011 63.6
Prupe.6G003600 Prunus persica HOM04D003964 ORTHO04D005036 0.0e+00 2340.1 2022 63.6
Glyma.18G000100 Glycine max HOM04D003964 ORTHO04D005036 0.0e+00 2317.3 2001 62.7
Araip.1QZ0D Arachis ipaensis HOM04D003964 ORTHO04D005036 0.0e+00 2305.8 2022 61.7
Gorai.004G264800 Gossypium raimondii HOM04D003964 ORTHO04D005036 0.0e+00 2304.2 1999 62.9
Glyma.11G256800 Glycine max HOM04D003964 ORTHO04D005036 0.0e+00 2296.9 2007 62.4
Peaxi162Scf00970g00016 Petunia axillaris HOM04D003964 ORTHO04D005036 0.0e+00 2261.1 1887 64.0
TPR.G19327 Trifolium pratense HOM04D003964 ORTHO04D005036 0.0e+00 2253.0 2004 62.1
Eucgr.J01768 Eucalyptus grandis HOM04D003964 ORTHO04D005036 0.0e+00 2243.4 2005 61.3
GSVIVG01025465001 Vitis vinifera HOM04D003964 ORTHO04D005036 0.0e+00 2240.3 1854 65.0
Medtr3g083500 Medicago truncatula HOM04D003964 ORTHO04D005036 0.0e+00 2204.1 1989 60.6
Cucsa.142320 Cucumis sativus L. HOM04D003964 ORTHO04D005036 0.0e+00 2199.9 2006 60.3
Bv4_070940_eyof Beta vulgaris HOM04D003964 ORTHO04D005036 0.0e+00 2192.5 1998 59.9
Cla011105.g Citrullus lanatus HOM04D003964 ORTHO04D005036 0.0e+00 2180.2 1997 59.1
AUR62040904 Chenopodium quinoa HOM04D003964 ORTHO04D005036 0.0e+00 2134.0 1995 57.9
THA.LOC104810327 Tarenaya hassleriana HOM04D003964 ORTHO04D005036 0.0e+00 2087.8 1978 58.9
AT1G55325 Arabidopsis thaliana HOM04D003964 ORTHO04D005036 0.0e+00 2065.8 1984 58.0
Tp1g41000 Schrenkiella parvula HOM04D003964 ORTHO04D005036 0.0e+00 2055.4 1979 57.6
Vradi0368s00100 Vigna radiata var. radiata HOM04D003964 ORTHO04D005036 0.0e+00 2053.5 2188 53.2
UGI.Scf00107.8246 Utricularia gibba HOM04D003964 ORTHO04D005036 0.0e+00 2049.2 1945 59.0
FVE24834 Fragaria vesca HOM04D003964 ORTHO04D005036 0.0e+00 2046.9 1981 58.5
Carubv10012222m.g Capsella rubella HOM04D003964 ORTHO04D005036 0.0e+00 2045.8 1979 57.5
AL1G63370 Arabidopsis lyrata HOM04D003964 ORTHO04D005036 0.0e+00 2027.3 1983 57.6
THA.LOC104822680 Tarenaya hassleriana HOM04D003964 ORTHO04D005036 0.0e+00 1984.1 1971 56.3
Pbr000757.1.g Pyrus bretschneideri HOM04D003964 ORTHO04D005036 0.0e+00 1960.3 1905 57.4
Bo6g034430 Brassica oleracea HOM04D003964 ORTHO04D005036 0.0e+00 1956.4 1989 55.6
Bo6g051250 Brassica oleracea HOM04D003964 ORTHO04D005036 0.0e+00 1956.0 1968 56.1
ATR0490G003 Amborella trichopoda HOM04D003964 ORTHO04D005036 0.0e+00 1835.8 2027 53.7
Zm00001d045603 Zea mays HOM04D003964 ORTHO04D005036 0.0e+00 1651.3 2015 50.4
AH014258 Amaranthus hypochondriacus HOM04D003964 ORTHO04D005036 0.0e+00 1618.2 1547 56.9
LOC_Os05g37500 Oryza sativa ssp. japonica HOM04D003964 ORTHO04D005036 0.0e+00 1538.9 1993 48.3
Brara.E01544 Brassica rapa HOM04D003964 ORTHO04D005036 0.0e+00 1435.6 1599 52.8
C.cajan_19231.g Cajanus cajan HOM04D003964 ORTHO04D005036 0.0e+00 1162.1 852 69.5
C.cajan_19230.g Cajanus cajan HOM04D003964 ORTHO04D005036 0.0e+00 1102.0 1144 56.5
RCO.g.28842.000056 Ricinus communis HOM04D003964 ORTHO04D005036 0.0e+00 1091.3 864 65.7
Cpa.g.sc119.44 Carica papaya HOM04D003964 ORTHO04D005036 0.0e+00 1075.1 777 72.3
COL.COLO4_07280 Corchorus olitorius HOM04D003964 ORTHO04D005036 6.0e-308 1060.8 776 70.9
NNU_03031 Nelumbo nucifera HOM04D003964 ORTHO04D005036 7.8e-300 1033.9 986 59.1
AUR62019164 Chenopodium quinoa HOM04D003964 ORTHO04D005036 5.1e-283 978.0 839 60.7
MDO.mRNA.g.872.39 Malus domestica HOM04D003964 ORTHO04D005036 1.3e-262 910.2 982 55.5
Mapoly0029s0052 Marchantia polymorpha HOM04D003964 ORTHO04D005036 3.3e-258 895.6 2135 33.0
AUR62019165 Chenopodium quinoa HOM04D003964 ORTHO04D005036 1.2e-247 860.5 1198 44.9
MDO.mRNA.g.872.38 Malus domestica HOM04D003964 ORTHO04D005036 1.3e-246 857.1 868 55.8
Pp3c11_22280 Physcomitrium patens HOM04D003964 ORTHO04D005036 5.2e-243 845.1 2139 32.5
Migut.L00371 Erythranthe guttata HOM04D003964 ORTHO04D005036 6.4e-193 678.7 432 76.6
Migut.L00380 Erythranthe guttata HOM04D003964 ORTHO04D005036 5.4e-192 675.6 651 59.1
MELO3C015581 Cucumis melo HOM04D003964 ORTHO04D005036 2.1e-191 673.7 520 65.8
PAB00012735 Picea abies HOM04D003964 ORTHO04D005036 2.1e-183 647.1 693 51.9
SMO365G0018 Selaginella moellendorffii HOM04D003964 ORTHO04D005036 2.1e-175 620.5 1921 30.6
Pp3c7_4610 Physcomitrium patens HOM04D003964 ORTHO04D005036 2.6e-162 577.0 1611 31.3
PAB00057785 Picea abies HOM04D003964 ORTHO04D005036 8.0e-111 406.0 692 38.9
Pbr030166.1.g Pyrus bretschneideri HOM04D003964 ORTHO04D005036 1.8e-107 394.8 490 48.2
Brara.E01501 Brassica rapa HOM04D003964 ORTHO04D005036 1.2e-98 365.5 245 70.6
Brara.F00037 Brassica rapa HOM04D003964 ORTHO04D005036 3.9e-97 360.5 244 68.9
CAN.G610.44 Capsicum annuum HOM04D003964 ORTHO04D005036 5.2e-86 323.6 296 57.8
MELO3C015582 Cucumis melo HOM04D003964 ORTHO04D005036 6.0e-82 310.1 251 64.9
CAN.G1237.45 Capsicum annuum HOM04D003964 ORTHO04D005036 5.1e-73 280.4 418 43.3
CAN.G1237.21 Capsicum annuum HOM04D003964 ORTHO04D005036 8.4e-68 263.1 263 54.8
COL.COLO4_07282 Corchorus olitorius HOM04D003964 ORTHO04D005036 3.5e-66 257.7 163 76.7
Brara.E01467 Brassica rapa HOM04D003964 ORTHO04D005036 5.6e-64 250.4 156 79.5
Brara.F00063 Brassica rapa HOM04D003964 ORTHO04D005036 5.6e-64 250.4 163 76.1
CAN.G1237.46 Capsicum annuum HOM04D003964 ORTHO04D005036 1.2e-58 232.6 223 57.4
Cpa.g.sc119.45 Carica papaya HOM04D003964 ORTHO04D005036 1.3e-47 196.1 211 56.4
Pbr030165.1.g Pyrus bretschneideri HOM04D003964 ORTHO04D005036 2.1e-42 178.7 131 64.9
NNU_15824 Nelumbo nucifera HOM04D003964 ORTHO04D005036 4.6e-34 151.0 127 60.6
CAN.G1237.22 Capsicum annuum HOM04D003964 ORTHO04D005036 4.3e-32 144.4 90 77.8
Vradi0147s00150 Vigna radiata var. radiata HOM04D004451 ORTHO04D005620 7.4e-24 117.1 76 73.7
CAN.G1248.23 Capsicum annuum HOM04D003964 ORTHO04D009142 2.8e-23 115.2 126 52.4
Bo2g014370 Brassica oleracea HOM04D003964 ORTHO04D002598 1.7e-20 105.9 61 75.4
NNU_03028 Nelumbo nucifera HOM04D003964 ORTHO04D005036 2.2e-15 89.0 113 49.6
NNU_03029 Nelumbo nucifera HOM04D003964 ORTHO04D005036 1.1e-14 86.7 51 72.5
Bo2g064150 Brassica oleracea HOM04D000804 ORTHO04D002598 9.1e-14 83.6 44 81.8
PAB00027675 Picea abies HOM04D003964 ORTHO04D005036 7.7e-13 80.5 59 66.1
CAN.G1237.23 Capsicum annuum HOM04D003964 ORTHO04D009142 4.0e-09 68.2 78 56.4
SMO358G0275 Selaginella moellendorffii HOM04D011056 ORTHO04D014610 9.1e-06 57.0 76 38.2

Actinidia chinensis (1 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (1 genes)
Beta vulgaris (1 genes)
Brassica oleracea (4 genes)
Brassica rapa (5 genes)
Cajanus cajan (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (8 genes)
Carica papaya (2 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (1 genes)
Hevea brasiliensis (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (2 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (3 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (2 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (0 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

Program Settings