Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
COL.COLO4_08240	Corchorus olitorius	HOM04D011601	ORTHO04D011380	2.9e-188	660.6	317	100.0
COL.COLO4_28108	Corchorus olitorius	HOM04D011601	ORTHO04D011380	3.9e-92	341.3	266	65.4
COL.COLO4_00100	Corchorus olitorius	HOM04D011601	ORTHO04D011380	3.2e-70	268.5	185	71.9
COL.COLO4_07543	Corchorus olitorius	HOM04D011601	ORTHO04D011380	4.2e-62	241.5	195	63.6
COL.COLO4_21439	Corchorus olitorius	HOM04D011601	ORTHO04D011380	8.8e-60	233.8	283	44.2
COL.COLO4_28109	Corchorus olitorius	HOM04D013209	ORTHO04D092251	1.5e-22	110.2	58	91.4
COL.COLO4_35223	Corchorus olitorius	HOM04D011601	ORTHO04D011380	7.3e-22	107.8	172	36.6
COL.COLO4_04726	Corchorus olitorius	HOM04D011601	ORTHO04D092241	7.3e-22	107.8	158	40.5
COL.COLO4_05305	Corchorus olitorius	HOM04D009777	ORTHO04D011380	4.7e-21	105.1	235	27.7
COL.COLO4_21442	Corchorus olitorius	HOM04D009777	ORTHO04D011380	6.2e-21	104.8	239	28.9
COL.COLO4_35725	Corchorus olitorius	HOM04D009777	ORTHO04D011380	4.4e-19	98.6	244	27.5
COL.COLO4_00102	Corchorus olitorius	HOM04D011601	ORTHO04D091362	6.4e-18	94.7	48	91.7
COL.COLO4_05304	Corchorus olitorius	HOM04D009777	ORTHO04D011380	3.5e-16	89.0	246	26.8
COL.COLO4_28110	Corchorus olitorius	HOM04D009777	ORTHO04D011380	3.9e-15	85.5	227	27.8
COL.COLO4_16889	Corchorus olitorius	HOM04D009777	ORTHO04D011380	2.1e-13	79.7	164	26.8
COL.COLO4_35227	Corchorus olitorius	HOM04D009777	ORTHO04D011380	2.1e-08	63.2	101	34.7
COL.COLO4_28383	Corchorus olitorius	HOM04D009777	ORTHO04D011380	2.1e-08	63.2	122	30.3
COL.COLO4_07545	Corchorus olitorius	HOM04D013209	ORTHO04D000936	2.7e-08	62.8	58	51.7
COL.COLO4_15171	Corchorus olitorius	HOM04D013209	ORTHO04D091951	1.3e-07	60.5	51	54.9
COL.COLO4_33729	Corchorus olitorius	HOM04D013209	ORTHO04D000936	1.7e-07	60.1	58	51.7
Cc02_g18270	Coffea canephora	HOM04D000818	ORTHO04D000154	3.0e-07	59.3	223	22.4
NNU_05523	Nelumbo nucifera	HOM04D000818	ORTHO04D001282	1.1e-06	57.4	98	34.7
NNU_18385	Nelumbo nucifera	HOM04D000818	ORTHO04D001282	1.9e-06	56.6	245	22.0
COL.COLO4_35723	Corchorus olitorius	HOM04D009777	ORTHO04D011380	1.9e-06	56.6	76	35.5
TCA.TCM_006973	Theobroma cacao	HOM04D000818	ORTHO04D009572	4.3e-06	55.5	67	34.3
COL.COLO4_07423	Corchorus olitorius	HOM04D009777	ORTHO04D011380	7.3e-06	54.7	65	36.9

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment